RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 RIMS1Q86UR5 1692 aaKnown RBP28.91■■■□□ 2.22
EXOSC3-202ENST00000396521 HECW1Q76N89 1606 aa28.9■■■□□ 2.22
EXOSC3-202ENST00000396521 ATP10AO60312 1499 aa28.9■■■□□ 2.22
EXOSC3-202ENST00000396521 ARHGAP35Q9NRY4 1499 aa28.86■■■□□ 2.21
EXOSC3-202ENST00000396521 MLECQ14165 292 aa28.86■■■□□ 2.21
EXOSC3-202ENST00000396521 CLIP1P30622 1438 aa28.85■■■□□ 2.21
EXOSC3-202ENST00000396521 C9orf84Q5VXU9 1444 aa28.85■■■□□ 2.21
EXOSC3-202ENST00000396521 TROQ12816 1431 aaPredicted RBP28.84■■■□□ 2.21
EXOSC3-202ENST00000396521 HSPA2P54652 639 aa28.83■■■□□ 2.21
EXOSC3-202ENST00000396521 ZNF518AQ6AHZ1 1483 aa28.83■■■□□ 2.21
EXOSC3-202ENST00000396521 PLPPR3Q6T4P5 718 aa28.81■■■□□ 2.2
EXOSC3-202ENST00000396521 KIF14Q15058 1648 aa28.78■■■□□ 2.2
EXOSC3-202ENST00000396521 ARHGEF12Q9NZN5 1544 aa28.78■■■□□ 2.2
EXOSC3-202ENST00000396521 MYO5CQ9NQX4 1742 aa28.77■■■□□ 2.2
EXOSC3-202ENST00000396521 EHMT2Q96KQ7 1210 aa28.77■■■□□ 2.2
EXOSC3-202ENST00000396521 CHIC1Q5VXU3 224 aa28.75■■■□□ 2.19
EXOSC3-202ENST00000396521 ARHGAP5Q13017 1502 aa28.74■■■□□ 2.19
EXOSC3-202ENST00000396521 AFAP1Q8N556 730 aa28.74■■■□□ 2.19
EXOSC3-202ENST00000396521 SIGLEC1Q9BZZ2 1709 aa28.73■■■□□ 2.19
EXOSC3-202ENST00000396521 MYT1LQ9UL68 1186 aa28.72■■■□□ 2.19
EXOSC3-202ENST00000396521 DMRT2Q9Y5R5 561 aa28.72■■■□□ 2.19
EXOSC3-202ENST00000396521 FER1L4A9Z1Z3 1794 aa28.72■■■□□ 2.19
EXOSC3-202ENST00000396521 KDM5CP41229 1560 aa28.7■■■□□ 2.18
EXOSC3-202ENST00000396521 CERKQ8TCT0 537 aa28.69■■■□□ 2.18
EXOSC3-202ENST00000396521 MLH3Q9UHC1 1453 aa28.67■■■□□ 2.18
EXOSC3-202ENST00000396521 CCDC18Q5T9S5 1454 aa28.66■■■□□ 2.18
EXOSC3-202ENST00000396521 CASKIN1Q8WXD9 1431 aa28.65■■■□□ 2.18
EXOSC3-202ENST00000396521 REREQ9P2R6 1566 aa28.64■■■□□ 2.18
EXOSC3-202ENST00000396521 CEBPAP49715 358 aaPredicted RBP28.63■■■□□ 2.17
EXOSC3-202ENST00000396521 ESF1Q9H501 851 aaKnown RBP28.62■■■□□ 2.17
EXOSC3-202ENST00000396521 UHRF1BP1Q6BDS2 1440 aa28.61■■■□□ 2.17
EXOSC3-202ENST00000396521 PREX1Q8TCU6 1659 aa28.59■■■□□ 2.17
EXOSC3-202ENST00000396521 AGLP35573 1532 aa28.58■■■□□ 2.17
EXOSC3-202ENST00000396521 SETD1BQ9UPS6 1966 aaKnown RBP28.57■■■□□ 2.16
EXOSC3-202ENST00000396521 DIP2CQ9Y2E4 1556 aa28.56■■■□□ 2.16
EXOSC3-202ENST00000396521 TRAPPC8Q9Y2L5 1435 aa28.54■■■□□ 2.16
EXOSC3-202ENST00000396521 ABCC1P33527 1531 aa28.53■■■□□ 2.16
EXOSC3-202ENST00000396521 CNTLNQ9NXG0 1405 aa28.52■■■□□ 2.16
EXOSC3-202ENST00000396521 PREX2Q70Z35 1606 aa28.52■■■□□ 2.16
EXOSC3-202ENST00000396521 CDC42BPBQ9Y5S2 1711 aa28.52■■■□□ 2.16
EXOSC3-202ENST00000396521 FYCO1Q9BQS8 1478 aa28.49■■■□□ 2.15
EXOSC3-202ENST00000396521 LRRIQ1Q96JM4 1722 aa28.48■■■□□ 2.15
EXOSC3-202ENST00000396521 ABCA6Q8N139 1617 aa28.47■■■□□ 2.15
EXOSC3-202ENST00000396521 PTPRTO14522 1441 aa28.45■■■□□ 2.15
EXOSC3-202ENST00000396521 SPAG9O60271 1321 aaKnown RBP28.42■■■□□ 2.14
EXOSC3-202ENST00000396521 ZNF777Q9ULD5 760 aaPredicted RBP28.41■■■□□ 2.14
EXOSC3-202ENST00000396521 KIAA1107Q9UPP5 1409 aa28.41■■■□□ 2.14
EXOSC3-202ENST00000396521 ITSN2Q9NZM3 1697 aa28.41■■■□□ 2.14
EXOSC3-202ENST00000396521 PLEKHH2Q8IVE3 1493 aa28.4■■■□□ 2.14
EXOSC3-202ENST00000396521 GPATCH8Q9UKJ3 1502 aaKnown RBP28.38■■■□□ 2.13
EXOSC3-202ENST00000396521 NPATQ14207 1427 aa28.38■■■□□ 2.13
EXOSC3-202ENST00000396521 STRCQ7RTU9 1775 aa28.37■■■□□ 2.13
EXOSC3-202ENST00000396521 KIDINS220Q9ULH0 1771 aa28.37■■■□□ 2.13
EXOSC3-202ENST00000396521 CFDP1Q9UEE9 299 aaPredicted RBP28.37■■■□□ 2.13
EXOSC3-202ENST00000396521 C3P01024 1663 aa28.37■■■□□ 2.13
EXOSC3-202ENST00000396521 SAMD9LQ8IVG5 1584 aa28.36■■■□□ 2.13
EXOSC3-202ENST00000396521 CDC42BPAQ5VT25 1732 aa28.35■■■□□ 2.13
EXOSC3-202ENST00000396521 HNRNPMP52272 730 aaKnown RBP eCLIP28.34■■■□□ 2.132e-9■□□□□ 10.1
EXOSC3-202ENST00000396521 PPP6R1Q9UPN7 881 aa28.33■■■□□ 2.13
EXOSC3-202ENST00000396521 ZMYM3Q14202 1370 aa28.33■■■□□ 2.13
EXOSC3-202ENST00000396521 CCNB3Q8WWL7 1395 aa28.32■■■□□ 2.12
EXOSC3-202ENST00000396521 SYCP2Q9BX26 1530 aa28.29■■■□□ 2.12
EXOSC3-202ENST00000396521 NCOA1Q15788 1441 aa28.29■■■□□ 2.12
EXOSC3-202ENST00000396521 MTUS2Q5JR59 1369 aa28.28■■■□□ 2.12
EXOSC3-202ENST00000396521 MROH2AA6NES4 1674 aa28.26■■■□□ 2.12
EXOSC3-202ENST00000396521 IQSEC2Q5JU85 1478 aa28.26■■■□□ 2.11
EXOSC3-202ENST00000396521 A2MP01023 1474 aa28.25■■■□□ 2.11
EXOSC3-202ENST00000396521 ATP7AQ04656 1500 aa28.24■■■□□ 2.11
EXOSC3-202ENST00000396521 PKD2Q13563 968 aa28.21■■■□□ 2.11
EXOSC3-202ENST00000396521 GGT6Q6P531 493 aa28.19■■■□□ 2.1
EXOSC3-202ENST00000396521 PLXNC1O60486 1568 aa28.19■■■□□ 2.1
EXOSC3-202ENST00000396521 LTBP4Q8N2S1 1624 aa28.18■■■□□ 2.1
EXOSC3-202ENST00000396521 INO80Q9ULG1 1556 aaPredicted RBP28.17■■■□□ 2.1
EXOSC3-202ENST00000396521 DISP3Q9P2K9 1392 aa28.16■■■□□ 2.1
EXOSC3-202ENST00000396521 CAMSAP1Q5T5Y3 1602 aa28.16■■■□□ 2.1
EXOSC3-202ENST00000396521 RTEL1-TNFRSF6BF6WH68 1400 aa28.16■■■□□ 2.1
EXOSC3-202ENST00000396521 PLA2R1Q13018 1463 aa28.15■■■□□ 2.1
EXOSC3-202ENST00000396521 PTPRKQ15262 1439 aa28.14■■■□□ 2.1
EXOSC3-202ENST00000396521 SUPT6HQ7KZ85 1726 aaKnown RBP28.13■■■□□ 2.09
EXOSC3-202ENST00000396521 RSPH4AQ5TD94 716 aa28.13■■■□□ 2.09
EXOSC3-202ENST00000396521 CEP162Q5TB80 1403 aa28.1■■■□□ 2.09
EXOSC3-202ENST00000396521 MBD5Q9P267 1494 aa28.1■■■□□ 2.09
EXOSC3-202ENST00000396521 NCKAP5LQ9HCH0 1330 aa28.1■■■□□ 2.09
EXOSC3-202ENST00000396521 EHBP1L1Q8N3D4 1523 aa28.09■■■□□ 2.09
EXOSC3-202ENST00000396521 ZNF644Q9H582 1327 aaPredicted RBP28.09■■■□□ 2.09
EXOSC3-202ENST00000396521 DHX29Q7Z478 1369 aaKnown RBP28.09■■■□□ 2.09
EXOSC3-202ENST00000396521 ADGBQ8N7X0 1667 aa28.07■■■□□ 2.08
EXOSC3-202ENST00000396521 CLTCQ00610 1675 aaKnown RBP28.06■■■□□ 2.08
EXOSC3-202ENST00000396521 TCOF1Q13428 1488 aaKnown RBP28.05■■■□□ 2.08
EXOSC3-202ENST00000396521 TIAM1Q13009 1591 aa28.04■■■□□ 2.08
EXOSC3-202ENST00000396521 CEP170BQ9Y4F5 1589 aaPredicted RBP28.04■■■□□ 2.08
EXOSC3-202ENST00000396521 ZNF142P52746 1687 aaPredicted RBP28.03■■■□□ 2.08
EXOSC3-202ENST00000396521 ZNF335Q9H4Z2 1342 aaPredicted RBP28.02■■■□□ 2.08
EXOSC3-202ENST00000396521 MYO3AQ8NEV4 1616 aa28.01■■■□□ 2.07
EXOSC3-202ENST00000396521 SOCS7O14512 581 aa28.01■■■□□ 2.07
EXOSC3-202ENST00000396521 FAM135AQ9P2D6 1515 aa28■■■□□ 2.07
EXOSC3-202ENST00000396521 A2ML1A8K2U0 1454 aa28■■■□□ 2.07
EXOSC3-202ENST00000396521 KIF3BO15066 747 aa27.99■■■□□ 2.07
EXOSC3-202ENST00000396521 UBAP1LF5GYI3 381 aa27.98■■■□□ 2.07
EXOSC3-202ENST00000396521 ILDR2Q71H61 639 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms