RNA–Protein interactions for RNA: ENST00000396247.7

RDH13-202, Transcript of retinol dehydrogenase 13, humanhuman

TSL 1 (best) BASIC

Gene RDH13, Length 1,987 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-202ENST00000396247 ABCC5O15440 1437 aa24.89■■□□□ 1.57
RDH13-202ENST00000396247 ZCCHC11Q5TAX3 1644 aaKnown RBP24.89■■□□□ 1.57
RDH13-202ENST00000396247 ZNF777Q9ULD5 760 aaPredicted RBP24.87■■□□□ 1.57
RDH13-202ENST00000396247 RRP7BPQ9NSQ0 103 aa24.86■■□□□ 1.57
RDH13-202ENST00000396247 GCC2Q8IWJ2 1684 aa24.85■■□□□ 1.57
RDH13-202ENST00000396247 MAPKBP1O60336 1514 aa24.84■■□□□ 1.57
RDH13-202ENST00000396247 ROCK1Q13464 1354 aa24.84■■□□□ 1.57
RDH13-202ENST00000396247 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.8■■□□□ 1.56
RDH13-202ENST00000396247 PREX2Q70Z35 1606 aa24.79■■□□□ 1.56
RDH13-202ENST00000396247 TTC37Q6PGP7 1564 aa24.79■■□□□ 1.56
RDH13-202ENST00000396247 KCNH8Q96L42 1107 aa24.76■■□□□ 1.55
RDH13-202ENST00000396247 CDC42BPBQ9Y5S2 1711 aa24.76■■□□□ 1.55
RDH13-202ENST00000396247 CROCC2H7BZ55 1655 aa24.75■■□□□ 1.55
RDH13-202ENST00000396247 KDM6BO15054 1643 aa24.71■■□□□ 1.55
RDH13-202ENST00000396247 ADGBQ8N7X0 1667 aa24.71■■□□□ 1.55
RDH13-202ENST00000396247 MYO5CQ9NQX4 1742 aa24.71■■□□□ 1.55
RDH13-202ENST00000396247 ADGRL2O95490 1459 aa24.7■■□□□ 1.55
RDH13-202ENST00000396247 ARHGAP5Q13017 1502 aa24.7■■□□□ 1.55
RDH13-202ENST00000396247 SAMD9LQ8IVG5 1584 aa24.7■■□□□ 1.55
RDH13-202ENST00000396247 NCOA1Q15788 1441 aa24.69■■□□□ 1.54
RDH13-202ENST00000396247 SHANK2Q9UPX8 1470 aa24.69■■□□□ 1.54
RDH13-202ENST00000396247 ARHGEF5Q12774 1597 aa24.69■■□□□ 1.54
RDH13-202ENST00000396247 WDR7Q9Y4E6 1490 aa24.68■■□□□ 1.54
RDH13-202ENST00000396247 ACIN1Q9UKV3 1341 aaKnown RBP24.68■■□□□ 1.54
RDH13-202ENST00000396247 MBD5Q9P267 1494 aa24.67■■□□□ 1.54
RDH13-202ENST00000396247 ANKRD30AQ9BXX3 1397 aa24.66■■□□□ 1.54
RDH13-202ENST00000396247 HNRNPMP52272 730 aaKnown RBP eCLIP24.66■■□□□ 1.54
RDH13-202ENST00000396247 PLCH2O75038 1416 aa24.65■■□□□ 1.54
RDH13-202ENST00000396247 TRIM52Q96A61 297 aa24.65■■□□□ 1.54
RDH13-202ENST00000396247 C9orf84Q5VXU9 1444 aa24.65■■□□□ 1.54
RDH13-202ENST00000396247 TSPY4P0CV99 314 aa24.64■■□□□ 1.54
RDH13-202ENST00000396247 TSPY10P0CW01 314 aa24.64■■□□□ 1.54
RDH13-202ENST00000396247 RSPH4AQ5TD94 716 aa24.63■■□□□ 1.53
RDH13-202ENST00000396247 CCDC141Q6ZP82 1450 aa24.63■■□□□ 1.53
RDH13-202ENST00000396247 PLEKHH2Q8IVE3 1493 aa24.61■■□□□ 1.53
RDH13-202ENST00000396247 NPM1P06748 294 aaKnown RBP eCLIP24.61■■□□□ 1.53
RDH13-202ENST00000396247 SIN3AQ96ST3 1273 aa24.61■■□□□ 1.53
RDH13-202ENST00000396247 SYCP2Q9BX26 1530 aa24.6■■□□□ 1.53
RDH13-202ENST00000396247 ASXL2Q76L83 1435 aa24.6■■□□□ 1.53
RDH13-202ENST00000396247 KIAA1107Q9UPP5 1409 aa24.59■■□□□ 1.53
RDH13-202ENST00000396247 EFCAB2Q5VUJ9 269 aa24.59■■□□□ 1.53
RDH13-202ENST00000396247 NEUROD1Q13562 356 aa24.58■■□□□ 1.52
RDH13-202ENST00000396247 ARAP3Q8WWN8 1544 aa24.56■■□□□ 1.52
RDH13-202ENST00000396247 TIMELESSQ9UNS1 1208 aa24.56■■□□□ 1.52
RDH13-202ENST00000396247 ZNF316A6NFI3 1004 aaPredicted RBP24.54■■□□□ 1.52
RDH13-202ENST00000396247 MPHOSPH9Q99550 1183 aa24.54■■□□□ 1.52
RDH13-202ENST00000396247 ANKRD50Q9ULJ7 1429 aa24.54■■□□□ 1.52
RDH13-202ENST00000396247 DENND4BO75064 1496 aaPredicted RBP24.54■■□□□ 1.52
RDH13-202ENST00000396247 ABCA9Q8IUA7 1624 aa24.54■■□□□ 1.52
RDH13-202ENST00000396247 PELP1Q8IZL8 1130 aaKnown RBP24.53■■□□□ 1.52
RDH13-202ENST00000396247 MAST1Q9Y2H9 1570 aa24.51■■□□□ 1.51
RDH13-202ENST00000396247 KIF15Q9NS87 1388 aa24.51■■□□□ 1.51
RDH13-202ENST00000396247 ARHGEF12Q9NZN5 1544 aa24.5■■□□□ 1.51
RDH13-202ENST00000396247 ABCC1P33527 1531 aa24.49■■□□□ 1.51
RDH13-202ENST00000396247 SCAF1Q9H7N4 1312 aaKnown RBP24.46■■□□□ 1.51
RDH13-202ENST00000396247 SLC4A1APQ9BWU0 796 aaKnown RBP24.45■■□□□ 1.5
RDH13-202ENST00000396247 FANCAO15360 1455 aa24.44■■□□□ 1.5
RDH13-202ENST00000396247 PZPP20742 1482 aa24.44■■□□□ 1.5
RDH13-202ENST00000396247 RIMBP3CA6NJZ7 1639 aa24.43■■□□□ 1.5
RDH13-202ENST00000396247 RIMBP3BA6NNM3 1639 aa24.43■■□□□ 1.5
RDH13-202ENST00000396247 TONSLQ96HA7 1378 aa24.43■■□□□ 1.5
RDH13-202ENST00000396247 RIMBP3Q9UFD9 1639 aa24.43■■□□□ 1.5
RDH13-202ENST00000396247 PLXNC1O60486 1568 aa24.41■■□□□ 1.5
RDH13-202ENST00000396247 TRAPPC8Q9Y2L5 1435 aa24.41■■□□□ 1.5
RDH13-202ENST00000396247 CYB5RLQ6IPT4 315 aa24.4■■□□□ 1.5
RDH13-202ENST00000396247 FOXD1Q16676 465 aa24.39■■□□□ 1.49
RDH13-202ENST00000396247 PPP1R15AO75807 674 aaPredicted RBP24.37■■□□□ 1.49
RDH13-202ENST00000396247 ANKRD30BQ9BXX2 1392 aa24.37■■□□□ 1.49
RDH13-202ENST00000396247 NUP155O75694 1391 aa24.36■■□□□ 1.49
RDH13-202ENST00000396247 KDM5DQ9BY66 1539 aa24.35■■□□□ 1.49
RDH13-202ENST00000396247 DIEXFQ68CQ4 756 aaKnown RBP24.35■■□□□ 1.49
RDH13-202ENST00000396247 ADGRL1O94910 1474 aa24.34■■□□□ 1.49
RDH13-202ENST00000396247 DUOX2Q9NRD8 1548 aa24.33■■□□□ 1.49
RDH13-202ENST00000396247 CD109Q6YHK3 1445 aa24.33■■□□□ 1.49
RDH13-202ENST00000396247 SPAG9O60271 1321 aaKnown RBP24.33■■□□□ 1.48
RDH13-202ENST00000396247 RTEL1-TNFRSF6BF6WH68 1400 aa24.32■■□□□ 1.48
RDH13-202ENST00000396247 AFAP1Q8N556 730 aa24.32■■□□□ 1.48
RDH13-202ENST00000396247 SCAPERQ9BY12 1400 aa24.31■■□□□ 1.48
RDH13-202ENST00000396247 PKD2Q13563 968 aa24.31■■□□□ 1.48
RDH13-202ENST00000396247 ERBINQ96RT1 1412 aa24.28■■□□□ 1.48
RDH13-202ENST00000396247 ZFYVE16Q7Z3T8 1539 aa24.28■■□□□ 1.48
RDH13-202ENST00000396247 RPRD2Q5VT52 1461 aaKnown RBP24.27■■□□□ 1.48
RDH13-202ENST00000396247 CFAP74Q9C0B2 1584 aa24.27■■□□□ 1.48
RDH13-202ENST00000396247 UNC13BO14795 1591 aa24.25■■□□□ 1.47
RDH13-202ENST00000396247 INO80Q9ULG1 1556 aaPredicted RBP24.23■■□□□ 1.47
RDH13-202ENST00000396247 ATP7AQ04656 1500 aa24.23■■□□□ 1.47
RDH13-202ENST00000396247 FAM135AQ9P2D6 1515 aa24.23■■□□□ 1.47
RDH13-202ENST00000396247 CENPBP07199 599 aaPredicted RBP24.21■■□□□ 1.47
RDH13-202ENST00000396247 ZNF518AQ6AHZ1 1483 aa24.19■■□□□ 1.46
RDH13-202ENST00000396247 L3MBTL2Q969R5 705 aa24.18■■□□□ 1.46
RDH13-202ENST00000396247 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.18■■□□□ 1.46
RDH13-202ENST00000396247 MAGI2Q86UL8 1455 aa24.17■■□□□ 1.46
RDH13-202ENST00000396247 NEO1Q92859 1461 aa24.17■■□□□ 1.46
RDH13-202ENST00000396247 GLI2P10070 1586 aa24.17■■□□□ 1.46
RDH13-202ENST00000396247 MYT1LQ9UL68 1186 aa24.16■■□□□ 1.46
RDH13-202ENST00000396247 IQGAP3Q86VI3 1631 aa24.16■■□□□ 1.46
RDH13-202ENST00000396247 TEX14Q8IWB6 1497 aa24.15■■□□□ 1.46
RDH13-202ENST00000396247 MAP3K4Q9Y6R4 1608 aa24.15■■□□□ 1.46
RDH13-202ENST00000396247 POGZQ7Z3K3 1410 aa24.14■■□□□ 1.46
RDH13-202ENST00000396247 KDM5CP41229 1560 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms