RNA–Protein interactions for RNA: ENST00000395445.5

PCDH15-213, Transcript of protocadherin related 15, humanhuman

TSL 1 (best) BASIC

Gene PCDH15, Length 5,917 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-213ENST00000395445 HSCBQ8IWL3 235 aa8.73□□□□□ -1.01
PCDH15-213ENST00000395445 USP35Q9P2H5 1018 aa8.72□□□□□ -1.01
PCDH15-213ENST00000395445 TIMELESSQ9UNS1 1208 aa8.72□□□□□ -1.01
PCDH15-213ENST00000395445 FRAT1Q92837 279 aaPredicted RBP8.72□□□□□ -1.01
PCDH15-213ENST00000395445 KCNH8Q96L42 1107 aa8.72□□□□□ -1.01
PCDH15-213ENST00000395445 KNSTRNQ9Y448 316 aa8.72□□□□□ -1.01
PCDH15-213ENST00000395445 CWC22Q9HCG8 908 aaKnown RBP8.71□□□□□ -1.02
PCDH15-213ENST00000395445 TRHP20396 242 aaPredicted RBP8.7□□□□□ -1.02
PCDH15-213ENST00000395445 SOX12O15370 315 aa8.7□□□□□ -1.02
PCDH15-213ENST00000395445 TCEAL9Q9UHQ7 104 aa8.7□□□□□ -1.02
PCDH15-213ENST00000395445 HTATSF1O43719 755 aaKnown RBP8.7□□□□□ -1.02
PCDH15-213ENST00000395445 CDCA8Q53HL2 280 aa8.7□□□□□ -1.02
PCDH15-213ENST00000395445 ARID3AQ99856 593 aa8.7□□□□□ -1.02
PCDH15-213ENST00000395445 U2SURPO15042 1029 aaKnown RBP8.69□□□□□ -1.02
PCDH15-213ENST00000395445 RGS3P49796 1198 aa8.69□□□□□ -1.02
PCDH15-213ENST00000395445 CTDP1Q9Y5B0 961 aaPredicted RBP8.69□□□□□ -1.02
PCDH15-213ENST00000395445 CSB-PGBD3P0DP91 1061 aa8.69□□□□□ -1.02
PCDH15-213ENST00000395445 MS4A1P11836 297 aa8.69□□□□□ -1.02
PCDH15-213ENST00000395445 KIAA1211Q6ZU35 1233 aa8.69□□□□□ -1.02
PCDH15-213ENST00000395445 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.69□□□□□ -1.022e-6■■■■■ 96.1
PCDH15-213ENST00000395445 GORABQ5T7V8 394 aa8.68□□□□□ -1.02
PCDH15-213ENST00000395445 CCDC34Q96HJ3 373 aa8.68□□□□□ -1.02
PCDH15-213ENST00000395445 SENP3-EIF4A1A0A087X0R7 540 aa8.68□□□□□ -1.02
PCDH15-213ENST00000395445 TPM3P06753 285 aa8.68□□□□□ -1.02
PCDH15-213ENST00000395445 TAF7LQ5H9L4 462 aa8.68□□□□□ -1.02
PCDH15-213ENST00000395445 SPRYD3Q8NCJ5 442 aa8.67□□□□□ -1.02
PCDH15-213ENST00000395445 RTF1Q92541 710 aaKnown RBP8.67□□□□□ -1.02
PCDH15-213ENST00000395445 RGL3Q3MIN7 710 aa8.67□□□□□ -1.02
PCDH15-213ENST00000395445 CHMP3Q9Y3E7 222 aa8.66□□□□□ -1.02
PCDH15-213ENST00000395445 DCAF8L1A6NGE4 600 aa8.66□□□□□ -1.02
PCDH15-213ENST00000395445 RRP12Q5JTH9 1297 aaKnown RBP8.65□□□□□ -1.02
PCDH15-213ENST00000395445 CHMP7Q8WUX9 453 aaPredicted RBP8.65□□□□□ -1.02
PCDH15-213ENST00000395445 RSPH6AQ9H0K4 717 aa8.65□□□□□ -1.02
PCDH15-213ENST00000395445 TRIM34Q9BYJ4 488 aa8.64□□□□□ -1.03
PCDH15-213ENST00000395445 PES1O00541 588 aaKnown RBP8.64□□□□□ -1.03
PCDH15-213ENST00000395445 CFAP44Q96MT7 982 aa8.64□□□□□ -1.03
PCDH15-213ENST00000395445 APBB1O00213 710 aa8.64□□□□□ -1.03
PCDH15-213ENST00000395445 FRAT2O75474 233 aaPredicted RBP8.64□□□□□ -1.03
PCDH15-213ENST00000395445 TPM2P07951 284 aa8.63□□□□□ -1.03
PCDH15-213ENST00000395445 TPD52L1Q16890 204 aaPredicted RBP8.63□□□□□ -1.03
PCDH15-213ENST00000395445 TOMM22Q9NS69 142 aa8.63□□□□□ -1.03
PCDH15-213ENST00000395445 PAK3O75914 559 aaPredicted RBP8.62□□□□□ -1.03
PCDH15-213ENST00000395445 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.62□□□□□ -1.03
PCDH15-213ENST00000395445 RAD21O60216 631 aa8.62□□□□□ -1.03
PCDH15-213ENST00000395445 HDGFP51858 240 aaKnown RBP8.61□□□□□ -1.03
PCDH15-213ENST00000395445 GPATCH3Q96I76 525 aa8.61□□□□□ -1.03
PCDH15-213ENST00000395445 HIRIP3Q9BW71 556 aaPredicted RBP8.61□□□□□ -1.03
PCDH15-213ENST00000395445 PTMSP20962 102 aa8.6□□□□□ -1.03
PCDH15-213ENST00000395445 TSR1Q2NL82 804 aaKnown RBP8.6□□□□□ -1.03
PCDH15-213ENST00000395445 GTF2E1P29083 439 aaPredicted RBP8.6□□□□□ -1.03
PCDH15-213ENST00000395445 SYAP1Q96A49 352 aaPredicted RBP8.6□□□□□ -1.03
PCDH15-213ENST00000395445 KLHL34Q8N239 644 aa8.59□□□□□ -1.03
PCDH15-213ENST00000395445 MLECQ14165 292 aa8.59□□□□□ -1.03
PCDH15-213ENST00000395445 CCDC70Q6NSX1 233 aa8.59□□□□□ -1.03
PCDH15-213ENST00000395445 MTUS2Q5JR59 1369 aa8.59□□□□□ -1.03
PCDH15-213ENST00000395445 CC2D1BQ5T0F9 858 aaKnown RBP8.59□□□□□ -1.03
PCDH15-213ENST00000395445 RRP7BPQ9NSQ0 103 aa8.58□□□□□ -1.04
PCDH15-213ENST00000395445 PPP4R2Q9NY27 417 aa8.58□□□□□ -1.04
PCDH15-213ENST00000395445 ZMYND15Q9H091 742 aa8.58□□□□□ -1.04
PCDH15-213ENST00000395445 CSPP1Q1MSJ5 1256 aa8.58□□□□□ -1.04
PCDH15-213ENST00000395445 FBXW7Q969H0 707 aa8.57□□□□□ -1.04
PCDH15-213ENST00000395445 SRPK2P78362 688 aaKnown RBP8.57□□□□□ -1.04
PCDH15-213ENST00000395445 IPO9Q96P70 1041 aaKnown RBP8.57□□□□□ -1.04
PCDH15-213ENST00000395445 PAF1Q8N7H5 531 aa8.56□□□□□ -1.04
PCDH15-213ENST00000395445 GBP4Q96PP9 640 aa8.56□□□□□ -1.04
PCDH15-213ENST00000395445 HSP90AA2PQ14568 343 aaPredicted RBP8.56□□□□□ -1.04
PCDH15-213ENST00000395445 B4GALNT3Q6L9W6 998 aa8.56□□□□□ -1.04
PCDH15-213ENST00000395445 PCMTD1Q96MG8 357 aaPredicted RBP8.56□□□□□ -1.04
PCDH15-213ENST00000395445 NOL10Q9BSC4 688 aaKnown RBP8.56□□□□□ -1.04
PCDH15-213ENST00000395445 CARD11Q9BXL7 1154 aa8.56□□□□□ -1.04
PCDH15-213ENST00000395445 MEX3CQ5U5Q3 659 aaKnown RBP8.56□□□□□ -1.04
PCDH15-213ENST00000395445 AMOTL1Q8IY63 956 aa8.56□□□□□ -1.04
PCDH15-213ENST00000395445 PHF23Q9BUL5 403 aaPredicted RBP8.56□□□□□ -1.04
PCDH15-213ENST00000395445 CCAR2Q8N163 923 aaKnown RBP8.56□□□□□ -1.04
PCDH15-213ENST00000395445 CCDC43Q96MW1 224 aaKnown RBP8.55□□□□□ -1.04
PCDH15-213ENST00000395445 BRPF3Q9ULD4 1205 aa8.55□□□□□ -1.04
PCDH15-213ENST00000395445 PLEKHD1A6NEE1 506 aa8.55□□□□□ -1.04
PCDH15-213ENST00000395445 AKAP17AQ02040 695 aaKnown RBP8.54□□□□□ -1.04
PCDH15-213ENST00000395445 TPM1P09493 284 aa8.54□□□□□ -1.04
PCDH15-213ENST00000395445 SF3A1Q15459 793 aaKnown RBP8.54□□□□□ -1.04
PCDH15-213ENST00000395445 ODF2Q5BJF6 829 aa8.54□□□□□ -1.04
PCDH15-213ENST00000395445 TRIM6-TRIM34B2RNG4 842 aa8.54□□□□□ -1.04
PCDH15-213ENST00000395445 AEBP2Q6ZN18 517 aaPredicted RBP8.53□□□□□ -1.04
PCDH15-213ENST00000395445 CT47A1Q5JQC4 288 aaPredicted RBP8.52□□□□□ -1.05
PCDH15-213ENST00000395445 SAFB2Q14151 953 aaKnown RBP eCLIP8.52□□□□□ -1.05
PCDH15-213ENST00000395445 NOL8Q76FK4 1167 aaKnown RBP8.52□□□□□ -1.05
PCDH15-213ENST00000395445 R3HCC1Q9Y3T6 440 aaKnown RBP8.52□□□□□ -1.05
PCDH15-213ENST00000395445 GPS2Q13227 327 aa8.52□□□□□ -1.05
PCDH15-213ENST00000395445 WWC2Q6AWC2 1192 aa8.52□□□□□ -1.05
PCDH15-213ENST00000395445 MORC1Q86VD1 984 aa8.52□□□□□ -1.05
PCDH15-213ENST00000395445 SAMD1Q6SPF0 538 aaPredicted RBP8.51□□□□□ -1.05
PCDH15-213ENST00000395445 DHX16O60231 1041 aaKnown RBP8.51□□□□□ -1.05
PCDH15-213ENST00000395445 CCDC47Q96A33 483 aaKnown RBP8.51□□□□□ -1.05
PCDH15-213ENST00000395445 HDGFL2Q7Z4V5 671 aaPredicted RBP8.51□□□□□ -1.05
PCDH15-213ENST00000395445 GZF1Q9H116 711 aaPredicted RBP8.51□□□□□ -1.05
PCDH15-213ENST00000395445 KANK1Q14678 1352 aa8.5□□□□□ -1.05
PCDH15-213ENST00000395445 IPO8O15397 1037 aaKnown RBP8.5□□□□□ -1.05
PCDH15-213ENST00000395445 H3BQV1 296 aa8.5□□□□□ -1.05
PCDH15-213ENST00000395445 HMMRO75330 724 aa8.5□□□□□ -1.05
PCDH15-213ENST00000395445 IFFO2Q5TF58 517 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms