RNA–Protein interactions for RNA: ENST00000395260.3

RTKN2-203, Transcript of rhotekin 2, humanhuman

TSL 1 (best) BASIC

Gene RTKN2, Length 2,076 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN2-203ENST00000395260 ABCC5O15440 1437 aa25.62■■□□□ 1.69
RTKN2-203ENST00000395260 CDC42BPAQ5VT25 1732 aa25.6■■□□□ 1.69
RTKN2-203ENST00000395260 ROCK1Q13464 1354 aa25.58■■□□□ 1.69
RTKN2-203ENST00000395260 ZNF777Q9ULD5 760 aaPredicted RBP25.57■■□□□ 1.68
RTKN2-203ENST00000395260 DIEXFQ68CQ4 756 aaKnown RBP25.53■■□□□ 1.68
RTKN2-203ENST00000395260 SIN3AQ96ST3 1273 aa25.52■■□□□ 1.68
RTKN2-203ENST00000395260 KDM6BO15054 1643 aa25.52■■□□□ 1.68
RTKN2-203ENST00000395260 UHRF1BP1LA0JNW5 1464 aa25.51■■□□□ 1.67
RTKN2-203ENST00000395260 NEUROD1Q13562 356 aa25.5■■□□□ 1.67
RTKN2-203ENST00000395260 CROCC2H7BZ55 1655 aa25.5■■□□□ 1.67
RTKN2-203ENST00000395260 ADGBQ8N7X0 1667 aa25.48■■□□□ 1.67
RTKN2-203ENST00000395260 ZCCHC11Q5TAX3 1644 aaKnown RBP25.46■■□□□ 1.67
RTKN2-203ENST00000395260 TRIM52Q96A61 297 aa25.46■■□□□ 1.67
RTKN2-203ENST00000395260 TIMELESSQ9UNS1 1208 aa25.45■■□□□ 1.66
RTKN2-203ENST00000395260 PREX2Q70Z35 1606 aa25.45■■□□□ 1.66
RTKN2-203ENST00000395260 ACIN1Q9UKV3 1341 aaKnown RBP25.44■■□□□ 1.66
RTKN2-203ENST00000395260 KDM5BQ9UGL1 1544 aa25.44■■□□□ 1.66
RTKN2-203ENST00000395260 ADGRL2O95490 1459 aa25.43■■□□□ 1.66
RTKN2-203ENST00000395260 CDC42BPBQ9Y5S2 1711 aa25.42■■□□□ 1.66
RTKN2-203ENST00000395260 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.41■■□□□ 1.66
RTKN2-203ENST00000395260 TTC37Q6PGP7 1564 aa25.41■■□□□ 1.66
RTKN2-203ENST00000395260 NCOA1Q15788 1441 aa25.41■■□□□ 1.66
RTKN2-203ENST00000395260 OSCARQ8IYS5 282 aa25.39■■□□□ 1.65
RTKN2-203ENST00000395260 SHANK2Q9UPX8 1470 aa25.39■■□□□ 1.65
RTKN2-203ENST00000395260 ANKRD30AQ9BXX3 1397 aa25.38■■□□□ 1.65
RTKN2-203ENST00000395260 SAMD9LQ8IVG5 1584 aa25.37■■□□□ 1.65
RTKN2-203ENST00000395260 ARHGEF5Q12774 1597 aa25.36■■□□□ 1.65
RTKN2-203ENST00000395260 MPHOSPH9Q99550 1183 aa25.35■■□□□ 1.65
RTKN2-203ENST00000395260 MYO5CQ9NQX4 1742 aa25.35■■□□□ 1.65
RTKN2-203ENST00000395260 DENND4BO75064 1496 aaPredicted RBP25.35■■□□□ 1.65
RTKN2-203ENST00000395260 KCNH8Q96L42 1107 aa25.35■■□□□ 1.65
RTKN2-203ENST00000395260 ARHGAP5Q13017 1502 aa25.34■■□□□ 1.65
RTKN2-203ENST00000395260 C9orf84Q5VXU9 1444 aa25.34■■□□□ 1.65
RTKN2-203ENST00000395260 HNRNPMP52272 730 aaKnown RBP eCLIP25.33■■□□□ 1.65
RTKN2-203ENST00000395260 TONSLQ96HA7 1378 aa25.33■■□□□ 1.64
RTKN2-203ENST00000395260 MBD5Q9P267 1494 aa25.32■■□□□ 1.64
RTKN2-203ENST00000395260 TSPY4P0CV99 314 aa25.32■■□□□ 1.64
RTKN2-203ENST00000395260 TSPY10P0CW01 314 aa25.32■■□□□ 1.64
RTKN2-203ENST00000395260 CCDC141Q6ZP82 1450 aa25.3■■□□□ 1.64
RTKN2-203ENST00000395260 RSPH4AQ5TD94 716 aa25.28■■□□□ 1.64
RTKN2-203ENST00000395260 PPP1R15AO75807 674 aaPredicted RBP25.27■■□□□ 1.64
RTKN2-203ENST00000395260 ANKRD50Q9ULJ7 1429 aa25.26■■□□□ 1.63
RTKN2-203ENST00000395260 SYCP2Q9BX26 1530 aa25.26■■□□□ 1.63
RTKN2-203ENST00000395260 PLEKHH2Q8IVE3 1493 aa25.24■■□□□ 1.63
RTKN2-203ENST00000395260 PLCH2O75038 1416 aa25.23■■□□□ 1.63
RTKN2-203ENST00000395260 SLC4A1APQ9BWU0 796 aaKnown RBP25.23■■□□□ 1.63
RTKN2-203ENST00000395260 WDR7Q9Y4E6 1490 aa25.21■■□□□ 1.63
RTKN2-203ENST00000395260 KIAA1107Q9UPP5 1409 aa25.21■■□□□ 1.63
RTKN2-203ENST00000395260 PZPP20742 1482 aa25.2■■□□□ 1.63
RTKN2-203ENST00000395260 KIF15Q9NS87 1388 aa25.2■■□□□ 1.62
RTKN2-203ENST00000395260 FOXD1Q16676 465 aa25.19■■□□□ 1.62
RTKN2-203ENST00000395260 EFCAB2Q5VUJ9 269 aa25.17■■□□□ 1.62
RTKN2-203ENST00000395260 MAST1Q9Y2H9 1570 aa25.17■■□□□ 1.62
RTKN2-203ENST00000395260 ANKRD30BQ9BXX2 1392 aa25.16■■□□□ 1.62
RTKN2-203ENST00000395260 ARAP3Q8WWN8 1544 aa25.13■■□□□ 1.61
RTKN2-203ENST00000395260 ARHGEF12Q9NZN5 1544 aa25.13■■□□□ 1.61
RTKN2-203ENST00000395260 ABCC1P33527 1531 aa25.11■■□□□ 1.61
RTKN2-203ENST00000395260 ASXL2Q76L83 1435 aa25.11■■□□□ 1.61
RTKN2-203ENST00000395260 RPRD2Q5VT52 1461 aaKnown RBP25.1■■□□□ 1.61
RTKN2-203ENST00000395260 NUP155O75694 1391 aa25.09■■□□□ 1.61
RTKN2-203ENST00000395260 KDM5DQ9BY66 1539 aa25.09■■□□□ 1.61
RTKN2-203ENST00000395260 PLXNC1O60486 1568 aa25.08■■□□□ 1.61
RTKN2-203ENST00000395260 ABCA9Q8IUA7 1624 aa25.08■■□□□ 1.61
RTKN2-203ENST00000395260 NPM1P06748 294 aaKnown RBP eCLIP25.08■■□□□ 1.6
RTKN2-203ENST00000395260 PKD2Q13563 968 aa25.06■■□□□ 1.6
RTKN2-203ENST00000395260 MIER1Q8N108 512 aa25.06■■□□□ 1.6
RTKN2-203ENST00000395260 TRAPPC8Q9Y2L5 1435 aa25.01■■□□□ 1.6
RTKN2-203ENST00000395260 L3MBTL2Q969R5 705 aa25.01■■□□□ 1.59
RTKN2-203ENST00000395260 FANCAO15360 1455 aa25■■□□□ 1.59
RTKN2-203ENST00000395260 DUOX2Q9NRD8 1548 aa24.99■■□□□ 1.59
RTKN2-203ENST00000395260 TEX14Q8IWB6 1497 aa24.98■■□□□ 1.59
RTKN2-203ENST00000395260 UNC13BO14795 1591 aa24.97■■□□□ 1.59
RTKN2-203ENST00000395260 FAM135AQ9P2D6 1515 aa24.95■■□□□ 1.58
RTKN2-203ENST00000395260 ERBINQ96RT1 1412 aa24.94■■□□□ 1.58
RTKN2-203ENST00000395260 SPAG9O60271 1321 aaKnown RBP24.93■■□□□ 1.58
RTKN2-203ENST00000395260 HIRIP3Q9BW71 556 aaPredicted RBP24.93■■□□□ 1.58
RTKN2-203ENST00000395260 RTEL1-TNFRSF6BF6WH68 1400 aa24.93■■□□□ 1.58
RTKN2-203ENST00000395260 AFAP1Q8N556 730 aa24.92■■□□□ 1.58
RTKN2-203ENST00000395260 ADGRL1O94910 1474 aa24.91■■□□□ 1.58
RTKN2-203ENST00000395260 ZFYVE16Q7Z3T8 1539 aa24.91■■□□□ 1.58
RTKN2-203ENST00000395260 SCAPERQ9BY12 1400 aa24.88■■□□□ 1.57
RTKN2-203ENST00000395260 IQGAP3Q86VI3 1631 aa24.87■■□□□ 1.57
RTKN2-203ENST00000395260 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.87■■□□□ 1.57
RTKN2-203ENST00000395260 MAGI2Q86UL8 1455 aa24.85■■□□□ 1.57
RTKN2-203ENST00000395260 INO80Q9ULG1 1556 aaPredicted RBP24.85■■□□□ 1.57
RTKN2-203ENST00000395260 ATP7AQ04656 1500 aa24.84■■□□□ 1.57
RTKN2-203ENST00000395260 CD109Q6YHK3 1445 aa24.84■■□□□ 1.57
RTKN2-203ENST00000395260 NBPF8Q3BBV2 869 aa24.83■■□□□ 1.57
RTKN2-203ENST00000395260 DDX10Q13206 875 aaKnown RBP24.82■■□□□ 1.56
RTKN2-203ENST00000395260 CFAP74Q9C0B2 1584 aa24.82■■□□□ 1.56
RTKN2-203ENST00000395260 EIF4G2P78344 907 aaKnown RBP eCLIP24.79■■□□□ 1.56
RTKN2-203ENST00000395260 HSPA5P11021 654 aaKnown RBP24.79■■□□□ 1.56
RTKN2-203ENST00000395260 RIMBP3CA6NJZ7 1639 aa24.78■■□□□ 1.56
RTKN2-203ENST00000395260 RIMBP3BA6NNM3 1639 aa24.78■■□□□ 1.56
RTKN2-203ENST00000395260 RIMBP3Q9UFD9 1639 aa24.78■■□□□ 1.56
RTKN2-203ENST00000395260 CYB5RLQ6IPT4 315 aa24.77■■□□□ 1.56
RTKN2-203ENST00000395260 MYT1LQ9UL68 1186 aa24.77■■□□□ 1.56
RTKN2-203ENST00000395260 CENPBP07199 599 aaPredicted RBP24.76■■□□□ 1.55
RTKN2-203ENST00000395260 ZNF518AQ6AHZ1 1483 aa24.75■■□□□ 1.55
RTKN2-203ENST00000395260 CCDC144AA2RUR9 1427 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms