RNA–Protein interactions for RNA: ENST00000395065.7

NXF3-201, Transcript of nuclear RNA export factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF3, Length 1,938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-201ENST00000395065 C11orf95C9JLR9 678 aaPredicted RBP8.58□□□□□ -1.04
NXF3-201ENST00000395065 HSPA5P11021 654 aaKnown RBP8.58□□□□□ -1.04
NXF3-201ENST00000395065 RTL5Q5HYW3 569 aaPredicted RBP8.58□□□□□ -1.04
NXF3-201ENST00000395065 ZBTB47Q9UFB7 747 aaPredicted RBP8.58□□□□□ -1.04
NXF3-201ENST00000395065 USP35Q9P2H5 1018 aa8.58□□□□□ -1.04
NXF3-201ENST00000395065 GAPVD1Q14C86 1478 aa8.58□□□□□ -1.04
NXF3-201ENST00000395065 SNAPC4Q5SXM2 1469 aa8.58□□□□□ -1.04
NXF3-201ENST00000395065 NCOA1Q15788 1441 aa8.58□□□□□ -1.04
NXF3-201ENST00000395065 FGD6Q6ZV73 1430 aa8.58□□□□□ -1.04
NXF3-201ENST00000395065 TARBP1Q13395 1621 aaKnown RBP8.57□□□□□ -1.04
NXF3-201ENST00000395065 NAIPQ13075 1403 aa8.57□□□□□ -1.04
NXF3-201ENST00000395065 PTPRKQ15262 1439 aa8.57□□□□□ -1.04
NXF3-201ENST00000395065 WASHC2CQ9Y4E1 1318 aa8.57□□□□□ -1.04
NXF3-201ENST00000395065 PBRM1Q86U86 1689 aa8.57□□□□□ -1.04
NXF3-201ENST00000395065 OSCARQ8IYS5 282 aa8.56□□□□□ -1.04
NXF3-201ENST00000395065 EIF4G2P78344 907 aaKnown RBP eCLIP8.56□□□□□ -1.04
NXF3-201ENST00000395065 FMN1Q68DA7 1419 aa8.56□□□□□ -1.04
NXF3-201ENST00000395065 IL27Q8NEV9 243 aa8.56□□□□□ -1.04
NXF3-201ENST00000395065 CCDC7Q96M83 1385 aa8.55□□□□□ -1.04
NXF3-201ENST00000395065 NCBP3Q53F19 620 aaKnown RBP8.54□□□□□ -1.04
NXF3-201ENST00000395065 MRS2Q9HD23 443 aa8.54□□□□□ -1.04
NXF3-201ENST00000395065 POLR1AO95602 1720 aaPredicted RBP8.54□□□□□ -1.04
NXF3-201ENST00000395065 FAM9BQ8IZU0 186 aa8.54□□□□□ -1.04
NXF3-201ENST00000395065 UBE2Q2Q8WVN8 375 aa8.54□□□□□ -1.04
NXF3-201ENST00000395065 NUDCQ9Y266 331 aa8.54□□□□□ -1.04
NXF3-201ENST00000395065 DENND4BO75064 1496 aaPredicted RBP8.54□□□□□ -1.04
NXF3-201ENST00000395065 PPP4R3CPQ6ZMV5 832 aa8.53□□□□□ -1.04
NXF3-201ENST00000395065 CCDC136Q96JN2 1154 aa8.52□□□□□ -1.04
NXF3-201ENST00000395065 ZNF608Q9ULD9 1512 aaPredicted RBP8.52□□□□□ -1.05
NXF3-201ENST00000395065 AKNAQ7Z591 1439 aa8.52□□□□□ -1.05
NXF3-201ENST00000395065 GRIN2BQ13224 1484 aa8.52□□□□□ -1.05
NXF3-201ENST00000395065 SUPT6HQ7KZ85 1726 aaKnown RBP8.51□□□□□ -1.05
NXF3-201ENST00000395065 MTUS2Q5JR59 1369 aa8.51□□□□□ -1.05
NXF3-201ENST00000395065 HECW1Q76N89 1606 aa8.51□□□□□ -1.05
NXF3-201ENST00000395065 SPATA31E1Q6ZUB1 1445 aa8.51□□□□□ -1.05
NXF3-201ENST00000395065 ADAMTS12P58397 1594 aa8.5□□□□□ -1.05
NXF3-201ENST00000395065 EHBP1L1Q8N3D4 1523 aa8.49□□□□□ -1.05
NXF3-201ENST00000395065 MYOM3Q5VTT5 1437 aa8.49□□□□□ -1.05
NXF3-201ENST00000395065 TCERG1O14776 1098 aaKnown RBP8.48□□□□□ -1.05
NXF3-201ENST00000395065 PPM1GO15355 546 aaPredicted RBP8.48□□□□□ -1.05
NXF3-201ENST00000395065 MAGI3Q5TCQ9 1506 aa8.48□□□□□ -1.05
NXF3-201ENST00000395065 IQGAP2Q13576 1575 aa8.48□□□□□ -1.05
NXF3-201ENST00000395065 GCC2Q8IWJ2 1684 aa8.48□□□□□ -1.05
NXF3-201ENST00000395065 MS4A1P11836 297 aa8.47□□□□□ -1.05
NXF3-201ENST00000395065 KIF7Q2M1P5 1343 aa8.47□□□□□ -1.05
NXF3-201ENST00000395065 DHX29Q7Z478 1369 aaKnown RBP8.47□□□□□ -1.05
NXF3-201ENST00000395065 UGGT2Q9NYU1 1516 aa8.47□□□□□ -1.05
NXF3-201ENST00000395065 NEFMP07197 916 aa8.46□□□□□ -1.05
NXF3-201ENST00000395065 L3MBTL2Q969R5 705 aa8.46□□□□□ -1.05
NXF3-201ENST00000395065 ARHGEF11O15085 1522 aa8.46□□□□□ -1.05
NXF3-201ENST00000395065 BACH2Q9BYV9 841 aa8.46□□□□□ -1.06
NXF3-201ENST00000395065 TCOF1Q13428 1488 aaKnown RBP8.45□□□□□ -1.06
NXF3-201ENST00000395065 ZBTB22O15209 634 aa8.44□□□□□ -1.06
NXF3-201ENST00000395065 PDE4AP27815 886 aa8.44□□□□□ -1.06
NXF3-201ENST00000395065 CDK13Q14004 1512 aaKnown RBP8.44□□□□□ -1.06
NXF3-201ENST00000395065 RPRD2Q5VT52 1461 aaKnown RBP8.44□□□□□ -1.06
NXF3-201ENST00000395065 TEX14Q8IWB6 1497 aa8.44□□□□□ -1.06
NXF3-201ENST00000395065 MIA2Q96PC5 1412 aa8.44□□□□□ -1.06
NXF3-201ENST00000395065 NBPF8Q3BBV2 869 aa8.44□□□□□ -1.06
NXF3-201ENST00000395065 PIAS4Q8N2W9 510 aaPredicted RBP8.44□□□□□ -1.06
NXF3-201ENST00000395065 EIF4G3O43432 1585 aaKnown RBP8.43□□□□□ -1.06
NXF3-201ENST00000395065 GSE1Q14687 1217 aa8.43□□□□□ -1.06
NXF3-201ENST00000395065 CYB5RLQ6IPT4 315 aa8.43□□□□□ -1.06
NXF3-201ENST00000395065 PNISRQ8TF01 805 aaKnown RBP8.43□□□□□ -1.06
NXF3-201ENST00000395065 ANKRD30BQ9BXX2 1392 aa8.43□□□□□ -1.06
NXF3-201ENST00000395065 FBLN2P98095 1184 aa8.42□□□□□ -1.06
NXF3-201ENST00000395065 MPHOSPH9Q99550 1183 aa8.42□□□□□ -1.06
NXF3-201ENST00000395065 RIMBP3CA6NJZ7 1639 aa8.42□□□□□ -1.06
NXF3-201ENST00000395065 RIMBP3BA6NNM3 1639 aa8.42□□□□□ -1.06
NXF3-201ENST00000395065 RIMBP3Q9UFD9 1639 aa8.42□□□□□ -1.06
NXF3-201ENST00000395065 EPRSP07814 1512 aaKnown RBP8.42□□□□□ -1.06
NXF3-201ENST00000395065 LRPPRCP42704 1394 aaKnown RBP8.42□□□□□ -1.06
NXF3-201ENST00000395065 ARID4BQ4LE39 1312 aaPredicted RBP8.42□□□□□ -1.06
NXF3-201ENST00000395065 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.42□□□□□ -1.06
NXF3-201ENST00000395065 KDM6BO15054 1643 aa8.41□□□□□ -1.06
NXF3-201ENST00000395065 RRP1P56182 461 aaKnown RBP8.41□□□□□ -1.06
NXF3-201ENST00000395065 LAS1LQ9Y4W2 734 aaKnown RBP8.41□□□□□ -1.06
NXF3-201ENST00000395065 IFT140Q96RY7 1462 aa8.4□□□□□ -1.06
NXF3-201ENST00000395065 KIAA0556O60303 1618 aa8.4□□□□□ -1.06
NXF3-201ENST00000395065 ARID3CA6NKF2 412 aa8.4□□□□□ -1.06
NXF3-201ENST00000395065 NPM3O75607 178 aaKnown RBP8.4□□□□□ -1.06
NXF3-201ENST00000395065 DDRGK1Q96HY6 314 aa8.4□□□□□ -1.06
NXF3-201ENST00000395065 BRPF3Q9ULD4 1205 aa8.4□□□□□ -1.06
NXF3-201ENST00000395065 TRHP20396 242 aaPredicted RBP8.39□□□□□ -1.07
NXF3-201ENST00000395065 NPM2Q86SE8 214 aaKnown RBP8.39□□□□□ -1.07
NXF3-201ENST00000395065 EXOC6Q8TAG9 804 aa8.39□□□□□ -1.07
NXF3-201ENST00000395065 RRP7BPQ9NSQ0 103 aa8.39□□□□□ -1.07
NXF3-201ENST00000395065 BCORL1Q5H9F3 1711 aa8.38□□□□□ -1.07
NXF3-201ENST00000395065 NFKBIBQ15653 356 aa8.38□□□□□ -1.07
NXF3-201ENST00000395065 CHIC2Q9UKJ5 165 aa8.38□□□□□ -1.07
NXF3-201ENST00000395065 DISP1Q96F81 1524 aa8.37□□□□□ -1.07
NXF3-201ENST00000395065 KTN1Q86UP2 1357 aaKnown RBP8.37□□□□□ -1.07
NXF3-201ENST00000395065 MBD5Q9P267 1494 aa8.37□□□□□ -1.07
NXF3-201ENST00000395065 RAPGEF6Q8TEU7 1601 aa8.37□□□□□ -1.07
NXF3-201ENST00000395065 PDE3BQ13370 1112 aa8.37□□□□□ -1.07
NXF3-201ENST00000395065 RSPH6AQ9H0K4 717 aa8.37□□□□□ -1.07
NXF3-201ENST00000395065 BRD4O60885 1362 aaPredicted RBP8.36□□□□□ -1.07
NXF3-201ENST00000395065 ROCK2O75116 1388 aaKnown RBP8.36□□□□□ -1.07
NXF3-201ENST00000395065 GRIN2AQ12879 1464 aa8.36□□□□□ -1.07
NXF3-201ENST00000395065 ROCK1Q13464 1354 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms