RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 SIGLEC1Q9BZZ2 1709 aa35.06■■■■□ 3.2
TRAF4-203ENST00000394925 MAGI2Q86UL8 1455 aa35.06■■■■□ 3.2
TRAF4-203ENST00000394925 FMN1Q68DA7 1419 aa35.04■■■■□ 3.2
TRAF4-203ENST00000394925 MLECQ14165 292 aa35.03■■■■□ 3.2
TRAF4-203ENST00000394925 ARHGAP35Q9NRY4 1499 aa35■■■■□ 3.19
TRAF4-203ENST00000394925 HSPA2P54652 639 aa34.98■■■■□ 3.19
TRAF4-203ENST00000394925 EFCAB2Q5VUJ9 269 aa34.97■■■■□ 3.19
TRAF4-203ENST00000394925 CDK11AQ9UQ88 783 aaPredicted RBP34.97■■■■□ 3.19
TRAF4-203ENST00000394925 MYO5CQ9NQX4 1742 aa34.97■■■■□ 3.19
TRAF4-203ENST00000394925 FER1L4A9Z1Z3 1794 aa34.92■■■■□ 3.18
TRAF4-203ENST00000394925 KIF14Q15058 1648 aa34.91■■■■□ 3.18
TRAF4-203ENST00000394925 ATP10AO60312 1499 aa34.9■■■■□ 3.18
TRAF4-203ENST00000394925 CHIC1Q5VXU3 224 aa34.86■■■■□ 3.17
TRAF4-203ENST00000394925 TROQ12816 1431 aaPredicted RBP34.86■■■■□ 3.17
TRAF4-203ENST00000394925 C9orf84Q5VXU9 1444 aa34.86■■■■□ 3.17
TRAF4-203ENST00000394925 ARHGAP5Q13017 1502 aa34.83■■■■□ 3.17
TRAF4-203ENST00000394925 ARHGEF12Q9NZN5 1544 aa34.82■■■■□ 3.16
TRAF4-203ENST00000394925 CLIP1P30622 1438 aa34.81■■■■□ 3.16
TRAF4-203ENST00000394925 LRRIQ1Q96JM4 1722 aa34.81■■■■□ 3.16
TRAF4-203ENST00000394925 ZNF518AQ6AHZ1 1483 aa34.8■■■■□ 3.16
TRAF4-203ENST00000394925 AFAP1Q8N556 730 aa34.8■■■■□ 3.16
TRAF4-203ENST00000394925 MYT1LQ9UL68 1186 aa34.78■■■■□ 3.16
TRAF4-203ENST00000394925 CEBPAP49715 358 aaPredicted RBP34.74■■■■□ 3.15
TRAF4-203ENST00000394925 KDM5CP41229 1560 aa34.74■■■■□ 3.15
TRAF4-203ENST00000394925 CDC42BPBQ9Y5S2 1711 aa34.7■■■■□ 3.15
TRAF4-203ENST00000394925 PREX1Q8TCU6 1659 aa34.67■■■■□ 3.14
TRAF4-203ENST00000394925 DIP2CQ9Y2E4 1556 aa34.66■■■■□ 3.14
TRAF4-203ENST00000394925 CERKQ8TCT0 537 aa34.64■■■■□ 3.14
TRAF4-203ENST00000394925 CASKIN1Q8WXD9 1431 aa34.63■■■■□ 3.13
TRAF4-203ENST00000394925 PREX2Q70Z35 1606 aa34.62■■■■□ 3.13
TRAF4-203ENST00000394925 CCDC18Q5T9S5 1454 aa34.61■■■■□ 3.13
TRAF4-203ENST00000394925 MLH3Q9UHC1 1453 aa34.6■■■■□ 3.13
TRAF4-203ENST00000394925 ABCA6Q8N139 1617 aa34.6■■■■□ 3.13
TRAF4-203ENST00000394925 TRAPPC8Q9Y2L5 1435 aa34.59■■■■□ 3.13
TRAF4-203ENST00000394925 REREQ9P2R6 1566 aa34.58■■■■□ 3.13
TRAF4-203ENST00000394925 ABCC1P33527 1531 aa34.57■■■■□ 3.12
TRAF4-203ENST00000394925 SETD1BQ9UPS6 1966 aaKnown RBP34.56■■■■□ 3.12
TRAF4-203ENST00000394925 ITSN2Q9NZM3 1697 aa34.54■■■■□ 3.12
TRAF4-203ENST00000394925 UHRF1BP1Q6BDS2 1440 aa34.54■■■■□ 3.12
TRAF4-203ENST00000394925 ESF1Q9H501 851 aaKnown RBP34.51■■■■□ 3.12
TRAF4-203ENST00000394925 CDC42BPAQ5VT25 1732 aa34.5■■■■□ 3.11
TRAF4-203ENST00000394925 STRCQ7RTU9 1775 aa34.49■■■■□ 3.11
TRAF4-203ENST00000394925 AGLP35573 1532 aa34.49■■■■□ 3.11
TRAF4-203ENST00000394925 C3P01024 1663 aa34.48■■■■□ 3.11
TRAF4-203ENST00000394925 DMRT2Q9Y5R5 561 aa34.48■■■■□ 3.11
TRAF4-203ENST00000394925 KIDINS220Q9ULH0 1771 aa34.47■■■■□ 3.11
TRAF4-203ENST00000394925 ZNF777Q9ULD5 760 aaPredicted RBP34.46■■■■□ 3.11
TRAF4-203ENST00000394925 FYCO1Q9BQS8 1478 aa34.46■■■■□ 3.11
TRAF4-203ENST00000394925 SAMD9LQ8IVG5 1584 aa34.38■■■■□ 3.09
TRAF4-203ENST00000394925 GPATCH8Q9UKJ3 1502 aaKnown RBP34.35■■■■□ 3.09
TRAF4-203ENST00000394925 SYCP2Q9BX26 1530 aa34.35■■■■□ 3.09
TRAF4-203ENST00000394925 HNRNPMP52272 730 aaKnown RBP eCLIP34.34■■■■□ 3.09
TRAF4-203ENST00000394925 CNTLNQ9NXG0 1405 aa34.34■■■■□ 3.09
TRAF4-203ENST00000394925 SPAG9O60271 1321 aaKnown RBP34.33■■■■□ 3.09
TRAF4-203ENST00000394925 PTPRTO14522 1441 aa34.3■■■■□ 3.08
TRAF4-203ENST00000394925 CFDP1Q9UEE9 299 aaPredicted RBP34.27■■■■□ 3.08
TRAF4-203ENST00000394925 SUPT6HQ7KZ85 1726 aaKnown RBP34.27■■■■□ 3.08
TRAF4-203ENST00000394925 CCNB3Q8WWL7 1395 aa34.23■■■■□ 3.07
TRAF4-203ENST00000394925 ATP7AQ04656 1500 aa34.23■■■■□ 3.07
TRAF4-203ENST00000394925 KIAA1107Q9UPP5 1409 aa34.22■■■■□ 3.07
TRAF4-203ENST00000394925 MROH2AA6NES4 1674 aa34.22■■■■□ 3.07
TRAF4-203ENST00000394925 ZMYM3Q14202 1370 aa34.22■■■■□ 3.07
TRAF4-203ENST00000394925 NCOA1Q15788 1441 aa34.21■■■■□ 3.07
TRAF4-203ENST00000394925 PLEKHH2Q8IVE3 1493 aa34.2■■■■□ 3.07
TRAF4-203ENST00000394925 MTUS2Q5JR59 1369 aa34.2■■■■□ 3.07
TRAF4-203ENST00000394925 NPATQ14207 1427 aa34.19■■■■□ 3.06
TRAF4-203ENST00000394925 INO80Q9ULG1 1556 aaPredicted RBP34.17■■■■□ 3.06
TRAF4-203ENST00000394925 A2MP01023 1474 aa34.16■■■■□ 3.06
TRAF4-203ENST00000394925 CLTCQ00610 1675 aaKnown RBP34.15■■■■□ 3.06
TRAF4-203ENST00000394925 CAMSAP1Q5T5Y3 1602 aa34.14■■■■□ 3.06
TRAF4-203ENST00000394925 PLXNC1O60486 1568 aa34.14■■■■□ 3.06
TRAF4-203ENST00000394925 GGT6Q6P531 493 aa34.13■■■■□ 3.05
TRAF4-203ENST00000394925 LTBP4Q8N2S1 1624 aa34.12■■■■□ 3.05
TRAF4-203ENST00000394925 ZNF644Q9H582 1327 aaPredicted RBP34.09■■■■□ 3.05
TRAF4-203ENST00000394925 NCKAP5LQ9HCH0 1330 aa34.06■■■■□ 3.04
TRAF4-203ENST00000394925 DISP3Q9P2K9 1392 aa34.06■■■■□ 3.04
TRAF4-203ENST00000394925 TIAM1Q13009 1591 aa34.06■■■■□ 3.04
TRAF4-203ENST00000394925 ADGBQ8N7X0 1667 aa34.03■■■■□ 3.04
TRAF4-203ENST00000394925 MYO3AQ8NEV4 1616 aa34.03■■■■□ 3.04
TRAF4-203ENST00000394925 PTPRKQ15262 1439 aa34.03■■■■□ 3.04
TRAF4-203ENST00000394925 EHBP1L1Q8N3D4 1523 aa34.01■■■■□ 3.04
TRAF4-203ENST00000394925 IQSEC2Q5JU85 1478 aa34■■■■□ 3.03
TRAF4-203ENST00000394925 MBD5Q9P267 1494 aa34■■■■□ 3.03
TRAF4-203ENST00000394925 ZNF142P52746 1687 aaPredicted RBP33.99■■■■□ 3.03
TRAF4-203ENST00000394925 PPP6R1Q9UPN7 881 aa33.98■■■■□ 3.03
TRAF4-203ENST00000394925 CEP170BQ9Y4F5 1589 aaPredicted RBP33.98■■■■□ 3.03
TRAF4-203ENST00000394925 CEP162Q5TB80 1403 aa33.96■■■■□ 3.03
TRAF4-203ENST00000394925 PKD2Q13563 968 aa33.95■■■■□ 3.03
TRAF4-203ENST00000394925 ILDR2Q71H61 639 aa33.95■■■■□ 3.03
TRAF4-203ENST00000394925 ZNF335Q9H4Z2 1342 aaPredicted RBP33.95■■■■□ 3.03
TRAF4-203ENST00000394925 PLA2R1Q13018 1463 aa33.95■■■■□ 3.02
TRAF4-203ENST00000394925 RTEL1-TNFRSF6BF6WH68 1400 aa33.93■■■■□ 3.02
TRAF4-203ENST00000394925 DHX29Q7Z478 1369 aaKnown RBP33.9■■■■□ 3.02
TRAF4-203ENST00000394925 TCOF1Q13428 1488 aaKnown RBP33.89■■■■□ 3.02
TRAF4-203ENST00000394925 KIF3BO15066 747 aa33.85■■■■□ 3.01
TRAF4-203ENST00000394925 SPATA31D1Q6ZQQ2 1576 aa33.84■■■■□ 3.01
TRAF4-203ENST00000394925 A2ML1A8K2U0 1454 aa33.83■■■■□ 3.01
TRAF4-203ENST00000394925 CCDC141Q6ZP82 1450 aa33.83■■■■□ 3.01
TRAF4-203ENST00000394925 NCOA2Q15596 1464 aa33.82■■■■□ 3.01
TRAF4-203ENST00000394925 UBAP1LF5GYI3 381 aa33.82■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms