RNA–Protein interactions for RNA: ENST00000394348.2

MITF-205, Transcript of melanogenesis associated transcription factor, human

TSL 1 (best) BASIC

Gene MITF, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MITF-205	ENST00000394348	CHD1	O14646	1710 aa		13.61	□□□□□ -0.23
MITF-205	ENST00000394348	CDK11A	Q9UQ88	783 aa	Predicted RBP	13.6	□□□□□ -0.23
MITF-205	ENST00000394348	TRO	Q12816	1431 aa	Predicted RBP	13.59	□□□□□ -0.23
MITF-205	ENST00000394348	MAPKBP1	O60336	1514 aa		13.58	□□□□□ -0.24
MITF-205	ENST00000394348	GCC2	Q8IWJ2	1684 aa		13.57	□□□□□ -0.24
MITF-205	ENST00000394348	ITSN2	Q9NZM3	1697 aa		13.57	□□□□□ -0.24
MITF-205	ENST00000394348	ACIN1	Q9UKV3	1341 aa	Known RBP	13.57	□□□□□ -0.24
MITF-205	ENST00000394348	FBLN2	P98095	1184 aa		13.56	□□□□□ -0.24
MITF-205	ENST00000394348	PLB1	Q6P1J6	1458 aa		13.55	□□□□□ -0.24
MITF-205	ENST00000394348	ITGAE	P38570	1179 aa		13.55	□□□□□ -0.24
MITF-205	ENST00000394348	PTPRK	Q15262	1439 aa		13.54	□□□□□ -0.24
MITF-205	ENST00000394348	NAIP	Q13075	1403 aa		13.53	□□□□□ -0.24
MITF-205	ENST00000394348	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.52	□□□□□ -0.25
MITF-205	ENST00000394348	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.52	□□□□□ -0.25
MITF-205	ENST00000394348	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.52	□□□□□ -0.25
MITF-205	ENST00000394348	PRG4	Q92954	1404 aa	Predicted RBP	13.52	□□□□□ -0.25
MITF-205	ENST00000394348	UACA	Q9BZF9	1416 aa		13.52	□□□□□ -0.25
MITF-205	ENST00000394348	DNMT1	P26358	1616 aa	Known RBP	13.52	□□□□□ -0.25
MITF-205	ENST00000394348	ROCK1	Q13464	1354 aa		13.51	□□□□□ -0.25
MITF-205	ENST00000394348	TIMELESS	Q9UNS1	1208 aa		13.51	□□□□□ -0.25
MITF-205	ENST00000394348	CLASP1	Q7Z460	1538 aa		13.5	□□□□□ -0.25
MITF-205	ENST00000394348	KIF14	Q15058	1648 aa		13.5	□□□□□ -0.25
MITF-205	ENST00000394348	PTPRG	P23470	1445 aa		13.48	□□□□□ -0.25
MITF-205	ENST00000394348	ATP10B	O94823	1461 aa		13.48	□□□□□ -0.25
MITF-205	ENST00000394348	CAPN15	O75808	1086 aa		13.47	□□□□□ -0.25
MITF-205	ENST00000394348	DAPK1	P53355	1430 aa		13.47	□□□□□ -0.25
MITF-205	ENST00000394348	GPATCH8	Q9UKJ3	1502 aa	Known RBP	13.46	□□□□□ -0.25
MITF-205	ENST00000394348	ABCC10	Q5T3U5	1492 aa		13.45	□□□□□ -0.26
MITF-205	ENST00000394348	CROCC2	H7BZ55	1655 aa		13.44	□□□□□ -0.26
MITF-205	ENST00000394348	ADGB	Q8N7X0	1667 aa		13.44	□□□□□ -0.26
MITF-205	ENST00000394348	ABCC2	Q92887	1545 aa		13.44	□□□□□ -0.26
MITF-205	ENST00000394348	ADGRL2	O95490	1459 aa		13.43	□□□□□ -0.26
MITF-205	ENST00000394348	CAMSAP2	Q08AD1	1489 aa		13.43	□□□□□ -0.26
MITF-205	ENST00000394348	ABCC5	O15440	1437 aa		13.43	□□□□□ -0.26
MITF-205	ENST00000394348	DIEXF	Q68CQ4	756 aa	Known RBP	13.43	□□□□□ -0.26
MITF-205	ENST00000394348	CDC42BPA	Q5VT25	1732 aa		13.42	□□□□□ -0.26
MITF-205	ENST00000394348	UHRF1BP1L	A0JNW5	1464 aa		13.42	□□□□□ -0.26
MITF-205	ENST00000394348	SHANK2	Q9UPX8	1470 aa		13.42	□□□□□ -0.26
MITF-205	ENST00000394348	PLEKHD1	A6NEE1	506 aa		13.41	□□□□□ -0.26
MITF-205	ENST00000394348	ARHGEF5	Q12774	1597 aa		13.39	□□□□□ -0.27
MITF-205	ENST00000394348	ARID3C	A6NKF2	412 aa		13.38	□□□□□ -0.27
MITF-205	ENST00000394348	PREX2	Q70Z35	1606 aa		13.38	□□□□□ -0.27
MITF-205	ENST00000394348	TRH	P20396	242 aa	Predicted RBP	13.37	□□□□□ -0.27
MITF-205	ENST00000394348	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.37	□□□□□ -0.27
MITF-205	ENST00000394348	ERCC6L2	Q5T890	1561 aa		13.34	□□□□□ -0.27
MITF-205	ENST00000394348	KDM6B	O15054	1643 aa		13.34	□□□□□ -0.27
MITF-205	ENST00000394348	KDM5B	Q9UGL1	1544 aa		13.34	□□□□□ -0.27
MITF-205	ENST00000394348	NCOA1	Q15788	1441 aa		13.33	□□□□□ -0.28
MITF-205	ENST00000394348	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.33	□□□□□ -0.28
MITF-205	ENST00000394348	RRP7BP	Q9NSQ0	103 aa		13.32	□□□□□ -0.28
MITF-205	ENST00000394348	ANKRD30A	Q9BXX3	1397 aa		13.32	□□□□□ -0.28
MITF-205	ENST00000394348	DENND4B	O75064	1496 aa	Predicted RBP	13.31	□□□□□ -0.28
MITF-205	ENST00000394348	PLEKHH2	Q8IVE3	1493 aa		13.31	□□□□□ -0.28
MITF-205	ENST00000394348	CDC42BPB	Q9Y5S2	1711 aa		13.3	□□□□□ -0.28
MITF-205	ENST00000394348	MAST1	Q9Y2H9	1570 aa		13.3	□□□□□ -0.28
MITF-205	ENST00000394348	RSPH4A	Q5TD94	716 aa		13.3	□□□□□ -0.28
MITF-205	ENST00000394348	CHIC2	Q9UKJ5	165 aa		13.3	□□□□□ -0.28
MITF-205	ENST00000394348	ZCCHC11	Q5TAX3	1644 aa	Known RBP	13.3	□□□□□ -0.28
MITF-205	ENST00000394348	ZNF644	Q9H582	1327 aa	Predicted RBP	13.3	□□□□□ -0.28
MITF-205	ENST00000394348	MYO5C	Q9NQX4	1742 aa		13.3	□□□□□ -0.28
MITF-205	ENST00000394348	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.29	□□□□□ -0.28
MITF-205	ENST00000394348	TONSL	Q96HA7	1378 aa		13.29	□□□□□ -0.28
MITF-205	ENST00000394348	CCDC141	Q6ZP82	1450 aa		13.29	□□□□□ -0.28
MITF-205	ENST00000394348	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	13.29	□□□□□ -0.28
MITF-205	ENST00000394348	ARAP3	Q8WWN8	1544 aa		13.29	□□□□□ -0.28
MITF-205	ENST00000394348	KDM5D	Q9BY66	1539 aa		13.29	□□□□□ -0.28
MITF-205	ENST00000394348	SAMD9L	Q8IVG5	1584 aa		13.28	□□□□□ -0.28
MITF-205	ENST00000394348	PPP1R15A	O75807	674 aa	Predicted RBP	13.28	□□□□□ -0.28
MITF-205	ENST00000394348	DSG3	P32926	999 aa		13.28	□□□□□ -0.28
MITF-205	ENST00000394348	SIN3A	Q96ST3	1273 aa		13.28	□□□□□ -0.28
MITF-205	ENST00000394348	C9orf84	Q5VXU9	1444 aa		13.28	□□□□□ -0.28
MITF-205	ENST00000394348	KIAA1107	Q9UPP5	1409 aa		13.28	□□□□□ -0.28
MITF-205	ENST00000394348	MBD5	Q9P267	1494 aa		13.28	□□□□□ -0.28
MITF-205	ENST00000394348	TTC37	Q6PGP7	1564 aa		13.28	□□□□□ -0.28
MITF-205	ENST00000394348	MPHOSPH9	Q99550	1183 aa		13.25	□□□□□ -0.29
MITF-205	ENST00000394348	PZP	P20742	1482 aa		13.24	□□□□□ -0.29
MITF-205	ENST00000394348	ANKRD50	Q9ULJ7	1429 aa		13.24	□□□□□ -0.29
MITF-205	ENST00000394348	NEUROD1	Q13562	356 aa		13.24	□□□□□ -0.29
MITF-205	ENST00000394348	PLXNC1	O60486	1568 aa		13.24	□□□□□ -0.29
MITF-205	ENST00000394348	ARHGAP5	Q13017	1502 aa		13.23	□□□□□ -0.29
MITF-205	ENST00000394348	ANKRD30B	Q9BXX2	1392 aa		13.23	□□□□□ -0.29
MITF-205	ENST00000394348	ABCB7	O75027	752 aa		13.23	□□□□□ -0.29
MITF-205	ENST00000394348	TRIM52	Q96A61	297 aa		13.23	□□□□□ -0.29
MITF-205	ENST00000394348	RPRD2	Q5VT52	1461 aa	Known RBP	13.23	□□□□□ -0.29
MITF-205	ENST00000394348	ATXN8OS	P0DMR3	200 aa		13.22	□□□□□ -0.29
MITF-205	ENST00000394348	PLCH2	O75038	1416 aa		13.22	□□□□□ -0.29
MITF-205	ENST00000394348	TSPY4	P0CV99	314 aa		13.21	□□□□□ -0.29
MITF-205	ENST00000394348	TSPY10	P0CW01	314 aa		13.21	□□□□□ -0.29
MITF-205	ENST00000394348	ZNF777	Q9ULD5	760 aa	Predicted RBP	13.21	□□□□□ -0.29
MITF-205	ENST00000394348	SYCP2	Q9BX26	1530 aa		13.2	□□□□□ -0.3
MITF-205	ENST00000394348	KIF15	Q9NS87	1388 aa		13.19	□□□□□ -0.3
MITF-205	ENST00000394348	ABCC1	P33527	1531 aa		13.18	□□□□□ -0.3
MITF-205	ENST00000394348	WDR7	Q9Y4E6	1490 aa		13.18	□□□□□ -0.3
MITF-205	ENST00000394348	TEX14	Q8IWB6	1497 aa		13.17	□□□□□ -0.3
MITF-205	ENST00000394348	UNC13B	O14795	1591 aa		13.17	□□□□□ -0.3
MITF-205	ENST00000394348	ABCA9	Q8IUA7	1624 aa		13.16	□□□□□ -0.3
MITF-205	ENST00000394348	DUOX2	Q9NRD8	1548 aa		13.14	□□□□□ -0.31
MITF-205	ENST00000394348	CENPB	P07199	599 aa	Predicted RBP	13.14	□□□□□ -0.31
MITF-205	ENST00000394348	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.13	□□□□□ -0.31
MITF-205	ENST00000394348	EFCAB2	Q5VUJ9	269 aa		13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms