RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 KDM5BQ9UGL1 1544 aa27.56■■■□□ 2
RCCD1-201ENST00000394258 JPH4Q96JJ6 628 aa27.55■■■□□ 2
RCCD1-201ENST00000394258 AKNAQ7Z591 1439 aa27.55■■■□□ 2
RCCD1-201ENST00000394258 CEP170Q5SW79 1584 aa27.55■■■□□ 2
RCCD1-201ENST00000394258 ABCC5O15440 1437 aa27.55■■■□□ 2
RCCD1-201ENST00000394258 MAGI1Q96QZ7 1491 aaPredicted RBP27.54■■■□□ 2
RCCD1-201ENST00000394258 CFDP1Q9UEE9 299 aaPredicted RBP27.53■■■□□ 2
RCCD1-201ENST00000394258 SYNJ2O15056 1496 aa27.53■■■□□ 2
RCCD1-201ENST00000394258 L3MBTL2Q969R5 705 aa27.52■■■□□ 2
RCCD1-201ENST00000394258 HSPA5P11021 654 aaKnown RBP27.49■■□□□ 1.99
RCCD1-201ENST00000394258 SLC4A1APQ9BWU0 796 aaKnown RBP27.48■■□□□ 1.99
RCCD1-201ENST00000394258 TROQ12816 1431 aaPredicted RBP27.46■■□□□ 1.99
RCCD1-201ENST00000394258 BCANQ96GW7 911 aa27.46■■□□□ 1.99
RCCD1-201ENST00000394258 ROCK1Q13464 1354 aa27.45■■□□□ 1.98
RCCD1-201ENST00000394258 CCER2I3L3R5 266 aa27.44■■□□□ 1.98
RCCD1-201ENST00000394258 DNMT1P26358 1616 aaKnown RBP27.44■■□□□ 1.98
RCCD1-201ENST00000394258 CARMIL2Q6F5E8 1435 aa27.43■■□□□ 1.98
RCCD1-201ENST00000394258 EIF4G2P78344 907 aaKnown RBP eCLIP27.4■■□□□ 1.98
RCCD1-201ENST00000394258 WASHC2AQ641Q2 1341 aa27.4■■□□□ 1.98
RCCD1-201ENST00000394258 CAMSAP2Q08AD1 1489 aa27.39■■□□□ 1.97
RCCD1-201ENST00000394258 ANKRD30BQ9BXX2 1392 aa27.38■■□□□ 1.97
RCCD1-201ENST00000394258 KIF14Q15058 1648 aa27.38■■□□□ 1.97
RCCD1-201ENST00000394258 FKBP8Q14318 412 aa27.38■■□□□ 1.97
RCCD1-201ENST00000394258 GPATCH8Q9UKJ3 1502 aaKnown RBP27.38■■□□□ 1.97
RCCD1-201ENST00000394258 NUP160Q12769 1436 aa27.37■■□□□ 1.97
RCCD1-201ENST00000394258 PLEKHD1A6NEE1 506 aa27.36■■□□□ 1.97
RCCD1-201ENST00000394258 NBPF8Q3BBV2 869 aa27.35■■□□□ 1.97
RCCD1-201ENST00000394258 TSHZ2Q9NRE2 1034 aa27.33■■□□□ 1.96
RCCD1-201ENST00000394258 NCOA1Q15788 1441 aa27.31■■□□□ 1.96
RCCD1-201ENST00000394258 C11orf95C9JLR9 678 aaPredicted RBP27.3■■□□□ 1.96
RCCD1-201ENST00000394258 RPRD2Q5VT52 1461 aaKnown RBP27.29■■□□□ 1.96
RCCD1-201ENST00000394258 ITSN2Q9NZM3 1697 aa27.25■■□□□ 1.95
RCCD1-201ENST00000394258 ATP10BO94823 1461 aa27.24■■□□□ 1.95
RCCD1-201ENST00000394258 ZNF326Q5BKZ1 582 aaKnown RBP27.24■■□□□ 1.95
RCCD1-201ENST00000394258 PZPP20742 1482 aa27.23■■□□□ 1.95
RCCD1-201ENST00000394258 PKD2Q13563 968 aa27.23■■□□□ 1.95
RCCD1-201ENST00000394258 ANKRD30AQ9BXX3 1397 aa27.21■■□□□ 1.95
RCCD1-201ENST00000394258 TEX14Q8IWB6 1497 aa27.21■■□□□ 1.95
RCCD1-201ENST00000394258 ANP32EQ9BTT0 268 aa27.2■■□□□ 1.94
RCCD1-201ENST00000394258 ADCY10Q96PN6 1610 aa27.18■■□□□ 1.94
RCCD1-201ENST00000394258 HNRNPMP52272 730 aaKnown RBP eCLIP27.18■■□□□ 1.945e-9■■■■□ 22.9
RCCD1-201ENST00000394258 ABCA8O94911 1581 aa27.18■■□□□ 1.94
RCCD1-201ENST00000394258 HNRNPUQ00839 825 aaKnown RBP eCLIP27.17■■□□□ 1.94
RCCD1-201ENST00000394258 ANKRD50Q9ULJ7 1429 aa27.16■■□□□ 1.94
RCCD1-201ENST00000394258 PTPRGP23470 1445 aa27.15■■□□□ 1.94
RCCD1-201ENST00000394258 CCDC7Q96M83 1385 aa27.15■■□□□ 1.94
RCCD1-201ENST00000394258 TSPY4P0CV99 314 aa27.14■■□□□ 1.94
RCCD1-201ENST00000394258 TSPY10P0CW01 314 aa27.14■■□□□ 1.94
RCCD1-201ENST00000394258 CCDC184Q52MB2 194 aa27.14■■□□□ 1.94
RCCD1-201ENST00000394258 NEFLP07196 543 aa27.13■■□□□ 1.93
RCCD1-201ENST00000394258 ADGBQ8N7X0 1667 aa27.13■■□□□ 1.93
RCCD1-201ENST00000394258 CDC42BPAQ5VT25 1732 aa27.12■■□□□ 1.93
RCCD1-201ENST00000394258 ADGRL2O95490 1459 aa27.12■■□□□ 1.93
RCCD1-201ENST00000394258 ABCC10Q5T3U5 1492 aa27.12■■□□□ 1.93
RCCD1-201ENST00000394258 KIAA1107Q9UPP5 1409 aa27.12■■□□□ 1.93
RCCD1-201ENST00000394258 NUP155O75694 1391 aa27.11■■□□□ 1.93
RCCD1-201ENST00000394258 CNTLNQ9NXG0 1405 aa27.11■■□□□ 1.93
RCCD1-201ENST00000394258 C9orf84Q5VXU9 1444 aa27.1■■□□□ 1.93
RCCD1-201ENST00000394258 CNGB1Q14028 1251 aaPredicted RBP27.1■■□□□ 1.93
RCCD1-201ENST00000394258 POLR3GLQ9BT43 218 aa27.09■■□□□ 1.93
RCCD1-201ENST00000394258 CROCC2H7BZ55 1655 aa27.09■■□□□ 1.93
RCCD1-201ENST00000394258 KIF7Q2M1P5 1343 aa27.08■■□□□ 1.93
RCCD1-201ENST00000394258 BCL11AQ9H165 835 aa27.05■■□□□ 1.92
RCCD1-201ENST00000394258 PRKRIP1Q9H875 184 aaPredicted RBP27.05■■□□□ 1.92
RCCD1-201ENST00000394258 SPATA31E1Q6ZUB1 1445 aa27.04■■□□□ 1.92
RCCD1-201ENST00000394258 FAM9BQ8IZU0 186 aa27.03■■□□□ 1.92
RCCD1-201ENST00000394258 KDM2AQ9Y2K7 1162 aa27.01■■□□□ 1.91
RCCD1-201ENST00000394258 KIF15Q9NS87 1388 aa27.01■■□□□ 1.91
RCCD1-201ENST00000394258 IRX6P78412 446 aaPredicted RBP27■■□□□ 1.91
RCCD1-201ENST00000394258 MRS2Q9HD23 443 aa26.99■■□□□ 1.91
RCCD1-201ENST00000394258 USP47Q96K76 1375 aa26.96■■□□□ 1.91
RCCD1-201ENST00000394258 SHANK2Q9UPX8 1470 aa26.95■■□□□ 1.9
RCCD1-201ENST00000394258 CHD1O14646 1710 aa26.94■■□□□ 1.9
RCCD1-201ENST00000394258 MBD5Q9P267 1494 aa26.93■■□□□ 1.9
RCCD1-201ENST00000394258 DCAF11Q8TEB1 546 aa26.9■■□□□ 1.9
RCCD1-201ENST00000394258 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.9■■□□□ 1.99e-7■■□□□ 14.1
RCCD1-201ENST00000394258 CARD11Q9BXL7 1154 aa26.89■■□□□ 1.89
RCCD1-201ENST00000394258 SAMD9LQ8IVG5 1584 aa26.88■■□□□ 1.89
RCCD1-201ENST00000394258 CDC42BPBQ9Y5S2 1711 aa26.87■■□□□ 1.89
RCCD1-201ENST00000394258 CCDC141Q6ZP82 1450 aa26.86■■□□□ 1.89
RCCD1-201ENST00000394258 ERCC6L2Q5T890 1561 aa26.86■■□□□ 1.89
RCCD1-201ENST00000394258 BCORL1Q5H9F3 1711 aa26.83■■□□□ 1.89
RCCD1-201ENST00000394258 ARHGEF5Q12774 1597 aa26.83■■□□□ 1.89
RCCD1-201ENST00000394258 ARHGAP5Q13017 1502 aa26.83■■□□□ 1.89
RCCD1-201ENST00000394258 RGL3Q3MIN7 710 aa26.82■■□□□ 1.88
RCCD1-201ENST00000394258 SYCP2Q9BX26 1530 aa26.81■■□□□ 1.88
RCCD1-201ENST00000394258 PREX2Q70Z35 1606 aa26.81■■□□□ 1.88
RCCD1-201ENST00000394258 RSPH4AQ5TD94 716 aa26.81■■□□□ 1.88
RCCD1-201ENST00000394258 TTC37Q6PGP7 1564 aa26.8■■□□□ 1.88
RCCD1-201ENST00000394258 ST20-MTHFSA0A0A6YYL1 179 aa26.79■■□□□ 1.88
RCCD1-201ENST00000394258 POLR1AO95602 1720 aaPredicted RBP26.79■■□□□ 1.88
RCCD1-201ENST00000394258 KDM5DQ9BY66 1539 aa26.77■■□□□ 1.88
RCCD1-201ENST00000394258 DHX29Q7Z478 1369 aaKnown RBP26.77■■□□□ 1.88
RCCD1-201ENST00000394258 RBM19Q9Y4C8 960 aaKnown RBP26.77■■□□□ 1.88
RCCD1-201ENST00000394258 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.77■■□□□ 1.881e-6■■■■■ 42.9
RCCD1-201ENST00000394258 KDM5CP41229 1560 aa26.77■■□□□ 1.88
RCCD1-201ENST00000394258 SENP3-EIF4A1A0A087X0R7 540 aa26.76■■□□□ 1.87
RCCD1-201ENST00000394258 UHRF1BP1Q6BDS2 1440 aa26.76■■□□□ 1.87
RCCD1-201ENST00000394258 FAM135AQ9P2D6 1515 aa26.76■■□□□ 1.87
RCCD1-201ENST00000394258 RALGAPBQ86X10 1494 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms