RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 UHRF1BP1LA0JNW5 1464 aa28.01■■■□□ 2.07
CLDND1-203ENST00000394181 DNMT1P26358 1616 aaKnown RBP28■■■□□ 2.07
CLDND1-203ENST00000394181 KCNH8Q96L42 1107 aa27.99■■■□□ 2.07
CLDND1-203ENST00000394181 KDM5BQ9UGL1 1544 aa27.97■■■□□ 2.07
CLDND1-203ENST00000394181 ZCCHC11Q5TAX3 1644 aaKnown RBP27.96■■■□□ 2.07
CLDND1-203ENST00000394181 KDM6BO15054 1643 aa27.96■■■□□ 2.07
CLDND1-203ENST00000394181 AKNAQ7Z591 1439 aa27.93■■■□□ 2.06
CLDND1-203ENST00000394181 SIN3AQ96ST3 1273 aa27.93■■■□□ 2.06
CLDND1-203ENST00000394181 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.91■■■□□ 2.06
CLDND1-203ENST00000394181 ROCK1Q13464 1354 aa27.9■■■□□ 2.06
CLDND1-203ENST00000394181 TTC37Q6PGP7 1564 aa27.9■■■□□ 2.06
CLDND1-203ENST00000394181 GCC2Q8IWJ2 1684 aa27.9■■■□□ 2.06
CLDND1-203ENST00000394181 HNRNPMP52272 730 aaKnown RBP eCLIP27.88■■■□□ 2.05
CLDND1-203ENST00000394181 NEUROD1Q13562 356 aa27.86■■■□□ 2.05
CLDND1-203ENST00000394181 CDC42BPBQ9Y5S2 1711 aa27.86■■■□□ 2.05
CLDND1-203ENST00000394181 TRIM52Q96A61 297 aa27.83■■■□□ 2.05
CLDND1-203ENST00000394181 PREX2Q70Z35 1606 aa27.83■■■□□ 2.05
CLDND1-203ENST00000394181 NCOA1Q15788 1441 aa27.82■■■□□ 2.04
CLDND1-203ENST00000394181 SAMD9LQ8IVG5 1584 aa27.8■■■□□ 2.04
CLDND1-203ENST00000394181 MBD5Q9P267 1494 aa27.79■■■□□ 2.04
CLDND1-203ENST00000394181 CROCC2H7BZ55 1655 aa27.78■■■□□ 2.04
CLDND1-203ENST00000394181 ARHGAP5Q13017 1502 aa27.77■■■□□ 2.04
CLDND1-203ENST00000394181 DENND4BO75064 1496 aaPredicted RBP27.76■■■□□ 2.03
CLDND1-203ENST00000394181 ZNF316A6NFI3 1004 aaPredicted RBP27.75■■■□□ 2.03
CLDND1-203ENST00000394181 ADGRL2O95490 1459 aa27.75■■■□□ 2.03
CLDND1-203ENST00000394181 C9orf84Q5VXU9 1444 aa27.74■■■□□ 2.03
CLDND1-203ENST00000394181 ANKRD30AQ9BXX3 1397 aa27.72■■■□□ 2.03
CLDND1-203ENST00000394181 TSPY4P0CV99 314 aa27.72■■■□□ 2.03
CLDND1-203ENST00000394181 TSPY10P0CW01 314 aa27.72■■■□□ 2.03
CLDND1-203ENST00000394181 MPHOSPH9Q99550 1183 aa27.72■■■□□ 2.03
CLDND1-203ENST00000394181 PLCH2O75038 1416 aa27.71■■■□□ 2.03
CLDND1-203ENST00000394181 ADGBQ8N7X0 1667 aa27.71■■■□□ 2.03
CLDND1-203ENST00000394181 MYO5CQ9NQX4 1742 aa27.71■■■□□ 2.03
CLDND1-203ENST00000394181 WDR7Q9Y4E6 1490 aa27.71■■■□□ 2.03
CLDND1-203ENST00000394181 ARHGEF5Q12774 1597 aa27.69■■■□□ 2.02
CLDND1-203ENST00000394181 SYCP2Q9BX26 1530 aa27.69■■■□□ 2.02
CLDND1-203ENST00000394181 SHANK2Q9UPX8 1470 aa27.69■■■□□ 2.02
CLDND1-203ENST00000394181 FOXD1Q16676 465 aa27.69■■■□□ 2.02
CLDND1-203ENST00000394181 ASXL2Q76L83 1435 aa27.67■■■□□ 2.02
CLDND1-203ENST00000394181 CCDC141Q6ZP82 1450 aa27.66■■■□□ 2.02
CLDND1-203ENST00000394181 ARHGEF12Q9NZN5 1544 aa27.65■■■□□ 2.02
CLDND1-203ENST00000394181 EFCAB2Q5VUJ9 269 aa27.64■■■□□ 2.02
CLDND1-203ENST00000394181 ANKRD50Q9ULJ7 1429 aa27.63■■■□□ 2.01
CLDND1-203ENST00000394181 NPM1P06748 294 aaKnown RBP eCLIP27.62■■■□□ 2.01
CLDND1-203ENST00000394181 RSPH4AQ5TD94 716 aa27.62■■■□□ 2.01
CLDND1-203ENST00000394181 KIAA1107Q9UPP5 1409 aa27.6■■■□□ 2.01
CLDND1-203ENST00000394181 KIF15Q9NS87 1388 aa27.6■■■□□ 2.01
CLDND1-203ENST00000394181 SLC4A1APQ9BWU0 796 aaKnown RBP27.59■■■□□ 2.01
CLDND1-203ENST00000394181 DIEXFQ68CQ4 756 aaKnown RBP27.58■■■□□ 2.01
CLDND1-203ENST00000394181 TIMELESSQ9UNS1 1208 aa27.57■■■□□ 2
CLDND1-203ENST00000394181 PLEKHH2Q8IVE3 1493 aa27.56■■■□□ 2
CLDND1-203ENST00000394181 PZPP20742 1482 aa27.56■■■□□ 2
CLDND1-203ENST00000394181 CYB5RLQ6IPT4 315 aa27.54■■■□□ 2
CLDND1-203ENST00000394181 PPP1R15AO75807 674 aaPredicted RBP27.53■■■□□ 2
CLDND1-203ENST00000394181 TRAPPC8Q9Y2L5 1435 aa27.53■■■□□ 2
CLDND1-203ENST00000394181 ABCA9Q8IUA7 1624 aa27.52■■■□□ 2
CLDND1-203ENST00000394181 ACIN1Q9UKV3 1341 aaKnown RBP27.52■■■□□ 2
CLDND1-203ENST00000394181 TONSLQ96HA7 1378 aa27.52■■■□□ 2
CLDND1-203ENST00000394181 ABCC1P33527 1531 aa27.51■■■□□ 2
CLDND1-203ENST00000394181 ANKRD30BQ9BXX2 1392 aa27.49■■□□□ 1.99
CLDND1-203ENST00000394181 AFAP1Q8N556 730 aa27.49■■□□□ 1.99
CLDND1-203ENST00000394181 ARAP3Q8WWN8 1544 aa27.48■■□□□ 1.99
CLDND1-203ENST00000394181 MAST1Q9Y2H9 1570 aa27.48■■□□□ 1.99
CLDND1-203ENST00000394181 FANCAO15360 1455 aa27.47■■□□□ 1.99
CLDND1-203ENST00000394181 NUP155O75694 1391 aa27.47■■□□□ 1.99
CLDND1-203ENST00000394181 PKD2Q13563 968 aa27.44■■□□□ 1.98
CLDND1-203ENST00000394181 RIMBP3CA6NJZ7 1639 aa27.44■■□□□ 1.98
CLDND1-203ENST00000394181 RIMBP3BA6NNM3 1639 aa27.44■■□□□ 1.98
CLDND1-203ENST00000394181 RIMBP3Q9UFD9 1639 aa27.44■■□□□ 1.98
CLDND1-203ENST00000394181 SPAG9O60271 1321 aaKnown RBP27.38■■□□□ 1.97
CLDND1-203ENST00000394181 PLXNC1O60486 1568 aa27.37■■□□□ 1.97
CLDND1-203ENST00000394181 SCAPERQ9BY12 1400 aa27.36■■□□□ 1.97
CLDND1-203ENST00000394181 CD109Q6YHK3 1445 aa27.36■■□□□ 1.97
CLDND1-203ENST00000394181 ADGRL1O94910 1474 aa27.35■■□□□ 1.97
CLDND1-203ENST00000394181 L3MBTL2Q969R5 705 aa27.35■■□□□ 1.97
CLDND1-203ENST00000394181 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.34■■□□□ 1.97
CLDND1-203ENST00000394181 RPRD2Q5VT52 1461 aaKnown RBP27.34■■□□□ 1.97
CLDND1-203ENST00000394181 KDM5DQ9BY66 1539 aa27.33■■□□□ 1.97
CLDND1-203ENST00000394181 DUOX2Q9NRD8 1548 aa27.31■■□□□ 1.96
CLDND1-203ENST00000394181 HIRIP3Q9BW71 556 aaPredicted RBP27.29■■□□□ 1.96
CLDND1-203ENST00000394181 ZFYVE16Q7Z3T8 1539 aa27.29■■□□□ 1.96
CLDND1-203ENST00000394181 RTEL1-TNFRSF6BF6WH68 1400 aa27.28■■□□□ 1.96
CLDND1-203ENST00000394181 FAM135AQ9P2D6 1515 aa27.27■■□□□ 1.96
CLDND1-203ENST00000394181 ERBINQ96RT1 1412 aa27.25■■□□□ 1.95
CLDND1-203ENST00000394181 MYT1LQ9UL68 1186 aa27.24■■□□□ 1.95
CLDND1-203ENST00000394181 UNC13BO14795 1591 aa27.23■■□□□ 1.95
CLDND1-203ENST00000394181 TEX14Q8IWB6 1497 aa27.23■■□□□ 1.95
CLDND1-203ENST00000394181 ATP7AQ04656 1500 aa27.22■■□□□ 1.95
CLDND1-203ENST00000394181 INO80Q9ULG1 1556 aaPredicted RBP27.2■■□□□ 1.94
CLDND1-203ENST00000394181 MIER1Q8N108 512 aa27.19■■□□□ 1.94
CLDND1-203ENST00000394181 NBPF8Q3BBV2 869 aa27.18■■□□□ 1.94
CLDND1-203ENST00000394181 MAGI2Q86UL8 1455 aa27.15■■□□□ 1.94
CLDND1-203ENST00000394181 ZNF518AQ6AHZ1 1483 aa27.14■■□□□ 1.94
CLDND1-203ENST00000394181 IQGAP3Q86VI3 1631 aa27.13■■□□□ 1.93
CLDND1-203ENST00000394181 RAPGEF3O95398 923 aa27.12■■□□□ 1.93
CLDND1-203ENST00000394181 POGZQ7Z3K3 1410 aa27.12■■□□□ 1.93
CLDND1-203ENST00000394181 FAM69CQ0P6D2 419 aa27.12■■□□□ 1.93
CLDND1-203ENST00000394181 PLA2R1Q13018 1463 aa27.11■■□□□ 1.93
CLDND1-203ENST00000394181 KIDINS220Q9ULH0 1771 aa27.11■■□□□ 1.93
CLDND1-203ENST00000394181 CFAP74Q9C0B2 1584 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms