RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 IFT140Q96RY7 1462 aa13.81□□□□□ -0.2
PSEN1-204ENST00000394164 CFDP1Q9UEE9 299 aaPredicted RBP13.8□□□□□ -0.2
PSEN1-204ENST00000394164 L3MBTL2Q969R5 705 aa13.8□□□□□ -0.2
PSEN1-204ENST00000394164 SLC4A1APQ9BWU0 796 aaKnown RBP13.8□□□□□ -0.2
PSEN1-204ENST00000394164 PRG4Q92954 1404 aaPredicted RBP13.8□□□□□ -0.2
PSEN1-204ENST00000394164 SALL2Q9Y467 1007 aaPredicted RBP13.79□□□□□ -0.2
PSEN1-204ENST00000394164 FANCIQ9NVI1 1328 aa13.79□□□□□ -0.2
PSEN1-204ENST00000394164 HSPA5P11021 654 aaKnown RBP13.78□□□□□ -0.2
PSEN1-204ENST00000394164 POLR3GLQ9BT43 218 aa13.78□□□□□ -0.2
PSEN1-204ENST00000394164 JPH4Q96JJ6 628 aa13.78□□□□□ -0.2
PSEN1-204ENST00000394164 PLB1Q6P1J6 1458 aa13.78□□□□□ -0.2
PSEN1-204ENST00000394164 DISP1Q96F81 1524 aa13.78□□□□□ -0.2
PSEN1-204ENST00000394164 RTN4Q9NQC3 1192 aaKnown RBP13.77□□□□□ -0.2
PSEN1-204ENST00000394164 WDR62O43379 1518 aa13.77□□□□□ -0.21
PSEN1-204ENST00000394164 GRIN2AQ12879 1464 aa13.76□□□□□ -0.21
PSEN1-204ENST00000394164 KIAA0586Q9BVV6 1533 aa13.76□□□□□ -0.21
PSEN1-204ENST00000394164 EIF4G3O43432 1585 aaKnown RBP13.76□□□□□ -0.21
PSEN1-204ENST00000394164 NUP153P49790 1475 aaKnown RBP13.75□□□□□ -0.21
PSEN1-204ENST00000394164 ARHGEF11O15085 1522 aa13.73□□□□□ -0.21
PSEN1-204ENST00000394164 DENND4BO75064 1496 aaPredicted RBP13.72□□□□□ -0.21
PSEN1-204ENST00000394164 KIAA0556O60303 1618 aa13.72□□□□□ -0.21
PSEN1-204ENST00000394164 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.72□□□□□ -0.21
PSEN1-204ENST00000394164 WASHC2AQ641Q2 1341 aa13.71□□□□□ -0.21
PSEN1-204ENST00000394164 DAPK1P53355 1430 aa13.71□□□□□ -0.21
PSEN1-204ENST00000394164 SENP3-EIF4A1A0A087X0R7 540 aa13.71□□□□□ -0.21
PSEN1-204ENST00000394164 ABCC5O15440 1437 aa13.71□□□□□ -0.21
PSEN1-204ENST00000394164 C11orf95C9JLR9 678 aaPredicted RBP13.71□□□□□ -0.22
PSEN1-204ENST00000394164 EIF4G2P78344 907 aaKnown RBP eCLIP13.71□□□□□ -0.22
PSEN1-204ENST00000394164 NBPF8Q3BBV2 869 aa13.71□□□□□ -0.22
PSEN1-204ENST00000394164 TCOF1Q13428 1488 aaKnown RBP13.7□□□□□ -0.22
PSEN1-204ENST00000394164 HNRNPUQ00839 825 aaKnown RBP eCLIP13.7□□□□□ -0.22
PSEN1-204ENST00000394164 PLEKHD1A6NEE1 506 aa13.69□□□□□ -0.22
PSEN1-204ENST00000394164 PAK3O75914 559 aaPredicted RBP13.69□□□□□ -0.22
PSEN1-204ENST00000394164 MIA2Q96PC5 1412 aa13.69□□□□□ -0.22
PSEN1-204ENST00000394164 HNRNPMP52272 730 aaKnown RBP eCLIP13.67□□□□□ -0.22
PSEN1-204ENST00000394164 CEP170Q5SW79 1584 aa13.67□□□□□ -0.22
PSEN1-204ENST00000394164 RAPGEF6Q8TEU7 1601 aa13.67□□□□□ -0.22
PSEN1-204ENST00000394164 CCDC184Q52MB2 194 aa13.66□□□□□ -0.22
PSEN1-204ENST00000394164 IL27Q8NEV9 243 aa13.66□□□□□ -0.22
PSEN1-204ENST00000394164 PKD2Q13563 968 aa13.66□□□□□ -0.22
PSEN1-204ENST00000394164 B4GALNT3Q6L9W6 998 aa13.66□□□□□ -0.22
PSEN1-204ENST00000394164 KDM2AQ9Y2K7 1162 aa13.66□□□□□ -0.22
PSEN1-204ENST00000394164 KDM5BQ9UGL1 1544 aa13.65□□□□□ -0.22
PSEN1-204ENST00000394164 SYNJ2O15056 1496 aa13.65□□□□□ -0.22
PSEN1-204ENST00000394164 FAM9BQ8IZU0 186 aa13.65□□□□□ -0.22
PSEN1-204ENST00000394164 NOP58Q9Y2X3 529 aaKnown RBP13.64□□□□□ -0.23
PSEN1-204ENST00000394164 CARMIL2Q6F5E8 1435 aa13.64□□□□□ -0.23
PSEN1-204ENST00000394164 MYT1LQ9UL68 1186 aa13.64□□□□□ -0.23
PSEN1-204ENST00000394164 TROQ12816 1431 aaPredicted RBP13.63□□□□□ -0.23
PSEN1-204ENST00000394164 KIF14Q15058 1648 aa13.63□□□□□ -0.23
PSEN1-204ENST00000394164 CCER2I3L3R5 266 aa13.63□□□□□ -0.23
PSEN1-204ENST00000394164 CAMSAP2Q08AD1 1489 aa13.62□□□□□ -0.23
PSEN1-204ENST00000394164 ANKRD30BQ9BXX2 1392 aa13.62□□□□□ -0.23
PSEN1-204ENST00000394164 GCC2Q8IWJ2 1684 aa13.62□□□□□ -0.23
PSEN1-204ENST00000394164 MAGI1Q96QZ7 1491 aaPredicted RBP13.62□□□□□ -0.23
PSEN1-204ENST00000394164 GPATCH8Q9UKJ3 1502 aaKnown RBP13.61□□□□□ -0.23
PSEN1-204ENST00000394164 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.61□□□□□ -0.232e-7■□□□□ 10.6
PSEN1-204ENST00000394164 TSPY4P0CV99 314 aa13.6□□□□□ -0.23
PSEN1-204ENST00000394164 TSPY10P0CW01 314 aa13.6□□□□□ -0.23
PSEN1-204ENST00000394164 AKNAQ7Z591 1439 aa13.58□□□□□ -0.23
PSEN1-204ENST00000394164 NUP155O75694 1391 aa13.58□□□□□ -0.24
PSEN1-204ENST00000394164 RTL5Q5HYW3 569 aaPredicted RBP13.58□□□□□ -0.24
PSEN1-204ENST00000394164 NCOA1Q15788 1441 aa13.58□□□□□ -0.24
PSEN1-204ENST00000394164 ROCK1Q13464 1354 aa13.57□□□□□ -0.24
PSEN1-204ENST00000394164 DNMT1P26358 1616 aaKnown RBP13.57□□□□□ -0.24
PSEN1-204ENST00000394164 MRS2Q9HD23 443 aa13.56□□□□□ -0.24
PSEN1-204ENST00000394164 RGL3Q3MIN7 710 aa13.56□□□□□ -0.24
PSEN1-204ENST00000394164 PPP4R2Q9NY27 417 aa13.55□□□□□ -0.24
PSEN1-204ENST00000394164 KIF7Q2M1P5 1343 aa13.55□□□□□ -0.24
PSEN1-204ENST00000394164 ANKRD30AQ9BXX3 1397 aa13.55□□□□□ -0.24
PSEN1-204ENST00000394164 PTPRGP23470 1445 aa13.55□□□□□ -0.24
PSEN1-204ENST00000394164 ATP10BO94823 1461 aa13.55□□□□□ -0.24
PSEN1-204ENST00000394164 RPRD2Q5VT52 1461 aaKnown RBP13.54□□□□□ -0.24
PSEN1-204ENST00000394164 CCDC7Q96M83 1385 aa13.54□□□□□ -0.24
PSEN1-204ENST00000394164 ANKRD50Q9ULJ7 1429 aa13.53□□□□□ -0.24
PSEN1-204ENST00000394164 PZPP20742 1482 aa13.53□□□□□ -0.24
PSEN1-204ENST00000394164 NUP160Q12769 1436 aa13.53□□□□□ -0.24
PSEN1-204ENST00000394164 DCAF11Q8TEB1 546 aa13.53□□□□□ -0.24
PSEN1-204ENST00000394164 PRKRIP1Q9H875 184 aaPredicted RBP13.52□□□□□ -0.24
PSEN1-204ENST00000394164 TEX14Q8IWB6 1497 aa13.5□□□□□ -0.25
PSEN1-204ENST00000394164 C9orf84Q5VXU9 1444 aa13.5□□□□□ -0.25
PSEN1-204ENST00000394164 CARD11Q9BXL7 1154 aa13.5□□□□□ -0.25
PSEN1-204ENST00000394164 CNTLNQ9NXG0 1405 aa13.49□□□□□ -0.25
PSEN1-204ENST00000394164 KIF15Q9NS87 1388 aa13.48□□□□□ -0.25
PSEN1-204ENST00000394164 KIAA1107Q9UPP5 1409 aa13.48□□□□□ -0.25
PSEN1-204ENST00000394164 NPM2Q86SE8 214 aaKnown RBP13.48□□□□□ -0.25
PSEN1-204ENST00000394164 USP47Q96K76 1375 aa13.47□□□□□ -0.25
PSEN1-204ENST00000394164 EIF5BO60841 1220 aaKnown RBP13.47□□□□□ -0.25
PSEN1-204ENST00000394164 ERICH6BQ5W0A0 696 aa13.47□□□□□ -0.25
PSEN1-204ENST00000394164 ZBTB47Q9UFB7 747 aaPredicted RBP13.47□□□□□ -0.25
PSEN1-204ENST00000394164 LAS1LQ9Y4W2 734 aaKnown RBP13.46□□□□□ -0.25
PSEN1-204ENST00000394164 ANP32AP39687 249 aaKnown RBP13.46□□□□□ -0.26
PSEN1-204ENST00000394164 ST20-MTHFSA0A0A6YYL1 179 aa13.45□□□□□ -0.26
PSEN1-204ENST00000394164 ITSN2Q9NZM3 1697 aa13.45□□□□□ -0.26
PSEN1-204ENST00000394164 CDC42BPAQ5VT25 1732 aa13.43□□□□□ -0.26
PSEN1-204ENST00000394164 ABCA8O94911 1581 aa13.43□□□□□ -0.26
PSEN1-204ENST00000394164 ABCC10Q5T3U5 1492 aa13.43□□□□□ -0.26
PSEN1-204ENST00000394164 IPO9Q96P70 1041 aaKnown RBP13.42□□□□□ -0.26
PSEN1-204ENST00000394164 ERCC6L2Q5T890 1561 aa13.42□□□□□ -0.26
PSEN1-204ENST00000394164 SPATA31E1Q6ZUB1 1445 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms