RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 JPH4Q96JJ6 628 aa11.95□□□□□ -0.5
CDH11-202ENST00000394156 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.95□□□□□ -0.5
CDH11-202ENST00000394156 MYH16Q9H6N6 1097 aa11.95□□□□□ -0.5
CDH11-202ENST00000394156 CADPSQ9ULU8 1353 aa11.95□□□□□ -0.5
CDH11-202ENST00000394156 MAPK8IP3Q9UPT6 1336 aa11.94□□□□□ -0.5
CDH11-202ENST00000394156 AQRO60306 1485 aaKnown RBP eCLIP11.94□□□□□ -0.5
CDH11-202ENST00000394156 ZNF330Q9Y3S2 320 aaPredicted RBP11.94□□□□□ -0.5
CDH11-202ENST00000394156 TRAK1Q9UPV9 953 aa11.93□□□□□ -0.5
CDH11-202ENST00000394156 L3MBTL2Q969R5 705 aa11.93□□□□□ -0.5
CDH11-202ENST00000394156 RTN4Q9NQC3 1192 aaKnown RBP11.93□□□□□ -0.5
CDH11-202ENST00000394156 CFAP53Q96M91 514 aa11.93□□□□□ -0.5
CDH11-202ENST00000394156 DNAJC5BQ9UF47 199 aa11.93□□□□□ -0.5
CDH11-202ENST00000394156 TMF1P82094 1093 aa11.93□□□□□ -0.5
CDH11-202ENST00000394156 MORC1Q86VD1 984 aa11.93□□□□□ -0.5
CDH11-202ENST00000394156 LTV1Q96GA3 475 aaPredicted RBP11.93□□□□□ -0.5
CDH11-202ENST00000394156 RRP7AQ9Y3A4 280 aaKnown RBP11.92□□□□□ -0.5
CDH11-202ENST00000394156 NCLP19338 710 aaKnown RBP11.92□□□□□ -0.5
CDH11-202ENST00000394156 FGD5Q6ZNL6 1462 aa11.9□□□□□ -0.5
CDH11-202ENST00000394156 KANK1Q14678 1352 aa11.9□□□□□ -0.5
CDH11-202ENST00000394156 NPHP1O15259 732 aa11.9□□□□□ -0.51
CDH11-202ENST00000394156 CARMIL2Q6F5E8 1435 aa11.88□□□□□ -0.51
CDH11-202ENST00000394156 WASHC2CQ9Y4E1 1318 aa11.86□□□□□ -0.51
CDH11-202ENST00000394156 NAP1L2Q9ULW6 460 aaPredicted RBP11.86□□□□□ -0.51
CDH11-202ENST00000394156 ZNF428Q96B54 188 aa11.85□□□□□ -0.51
CDH11-202ENST00000394156 PLIN1O60240 522 aa11.85□□□□□ -0.51
CDH11-202ENST00000394156 OS9Q13438 667 aaPredicted RBP11.85□□□□□ -0.51
CDH11-202ENST00000394156 U2AF1L5P0DN76 240 aaPredicted RBP11.84□□□□□ -0.51
CDH11-202ENST00000394156 U2AF1Q01081 240 aaKnown RBP eCLIP11.84□□□□□ -0.51
CDH11-202ENST00000394156 CLUAP1Q96AJ1 413 aa11.84□□□□□ -0.51
CDH11-202ENST00000394156 SYNJ1O43426 1573 aa11.84□□□□□ -0.51
CDH11-202ENST00000394156 BCL2L13Q9BXK5 485 aa11.83□□□□□ -0.52
CDH11-202ENST00000394156 CDCA8Q53HL2 280 aa11.83□□□□□ -0.52
CDH11-202ENST00000394156 SPAG9O60271 1321 aaKnown RBP11.83□□□□□ -0.52
CDH11-202ENST00000394156 CCDC9Q9Y3X0 531 aaKnown RBP11.83□□□□□ -0.52
CDH11-202ENST00000394156 FMN1Q68DA7 1419 aa11.83□□□□□ -0.52
CDH11-202ENST00000394156 ST20-MTHFSA0A0A6YYL1 179 aa11.82□□□□□ -0.52
CDH11-202ENST00000394156 CC2D2AQ9P2K1 1620 aa11.82□□□□□ -0.52
CDH11-202ENST00000394156 NUDCQ9Y266 331 aa11.82□□□□□ -0.52
CDH11-202ENST00000394156 ELL2O00472 640 aaPredicted RBP11.81□□□□□ -0.52
CDH11-202ENST00000394156 EFCAB2Q5VUJ9 269 aa11.81□□□□□ -0.52
CDH11-202ENST00000394156 TCERG1O14776 1098 aaKnown RBP11.8□□□□□ -0.52
CDH11-202ENST00000394156 NECTIN2Q92692 538 aa11.8□□□□□ -0.52
CDH11-202ENST00000394156 GAPVD1Q14C86 1478 aa11.8□□□□□ -0.52
CDH11-202ENST00000394156 CSB-PGBD3P0DP91 1061 aa11.8□□□□□ -0.52
CDH11-202ENST00000394156 ANKRD30AQ9BXX3 1397 aa11.79□□□□□ -0.52
CDH11-202ENST00000394156 NUTM2GQ5VZR2 741 aa11.79□□□□□ -0.52
CDH11-202ENST00000394156 ANP32BQ92688 251 aaKnown RBP11.79□□□□□ -0.52
CDH11-202ENST00000394156 MINK1Q8N4C8 1332 aaPredicted RBP11.79□□□□□ -0.52
CDH11-202ENST00000394156 PANK3Q9H999 370 aa11.78□□□□□ -0.52
CDH11-202ENST00000394156 DHX57Q6P158 1386 aaKnown RBP11.78□□□□□ -0.52
CDH11-202ENST00000394156 FOXD4L1Q9NU39 408 aa11.77□□□□□ -0.53
CDH11-202ENST00000394156 PPP4R2Q9NY27 417 aa11.77□□□□□ -0.53
CDH11-202ENST00000394156 UNC13AQ9UPW8 1703 aa11.77□□□□□ -0.53
CDH11-202ENST00000394156 KTN1Q86UP2 1357 aaKnown RBP11.77□□□□□ -0.53
CDH11-202ENST00000394156 ITPRIPQ8IWB1 547 aa11.77□□□□□ -0.53
CDH11-202ENST00000394156 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.77□□□□□ -0.53
CDH11-202ENST00000394156 PLCB2Q00722 1185 aa11.76□□□□□ -0.53
CDH11-202ENST00000394156 SLC4A10Q6U841 1118 aa11.76□□□□□ -0.53
CDH11-202ENST00000394156 IGF1RP08069 1367 aa11.76□□□□□ -0.53
CDH11-202ENST00000394156 NGEFQ8N5V2 710 aa11.75□□□□□ -0.53
CDH11-202ENST00000394156 TMEM132EQ6IEE7 984 aa11.75□□□□□ -0.53
CDH11-202ENST00000394156 CCDC18Q5T9S5 1454 aa11.75□□□□□ -0.53
CDH11-202ENST00000394156 RTF1Q92541 710 aaKnown RBP11.75□□□□□ -0.53
CDH11-202ENST00000394156 HDGFL2Q7Z4V5 671 aaPredicted RBP11.74□□□□□ -0.53
CDH11-202ENST00000394156 FAM69CQ0P6D2 419 aa11.74□□□□□ -0.53
CDH11-202ENST00000394156 NGDNQ8NEJ9 315 aaKnown RBP11.74□□□□□ -0.53
CDH11-202ENST00000394156 NOL8Q76FK4 1167 aaKnown RBP11.74□□□□□ -0.53
CDH11-202ENST00000394156 KIF21BO75037 1637 aa11.74□□□□□ -0.53
CDH11-202ENST00000394156 PHLDB1Q86UU1 1377 aa11.73□□□□□ -0.53
CDH11-202ENST00000394156 PTPRGP23470 1445 aa11.73□□□□□ -0.53
CDH11-202ENST00000394156 CHMP3Q9Y3E7 222 aa11.73□□□□□ -0.53
CDH11-202ENST00000394156 RCAN3Q9UKA8 241 aa11.72□□□□□ -0.53
CDH11-202ENST00000394156 HSP90AB1P08238 724 aaKnown RBP11.71□□□□□ -0.53
CDH11-202ENST00000394156 KCNJ4P48050 445 aa11.71□□□□□ -0.54
CDH11-202ENST00000394156 AFAP1Q8N556 730 aa11.7□□□□□ -0.54
CDH11-202ENST00000394156 RBM19Q9Y4C8 960 aaKnown RBP11.7□□□□□ -0.54
CDH11-202ENST00000394156 SLC4A3P48751 1232 aa11.7□□□□□ -0.54
CDH11-202ENST00000394156 BECN1Q14457 450 aa11.69□□□□□ -0.54
CDH11-202ENST00000394156 GZF1Q9H116 711 aaPredicted RBP11.69□□□□□ -0.54
CDH11-202ENST00000394156 FOXD4L5Q5VV16 416 aaPredicted RBP11.69□□□□□ -0.54
CDH11-202ENST00000394156 FOXD4L4Q8WXT5 416 aaPredicted RBP11.69□□□□□ -0.54
CDH11-202ENST00000394156 ANP32EQ9BTT0 268 aa11.68□□□□□ -0.54
CDH11-202ENST00000394156 SLKQ9H2G2 1235 aaPredicted RBP11.68□□□□□ -0.54
CDH11-202ENST00000394156 SMC4Q9NTJ3 1288 aa11.68□□□□□ -0.54
CDH11-202ENST00000394156 ISY1Q9ULR0 285 aaKnown RBP11.68□□□□□ -0.54
CDH11-202ENST00000394156 AMPHP49418 695 aa11.67□□□□□ -0.54
CDH11-202ENST00000394156 OSCARQ8IYS5 282 aa11.67□□□□□ -0.54
CDH11-202ENST00000394156 CASC1Q6TDU7 716 aa11.67□□□□□ -0.54
CDH11-202ENST00000394156 CABP2Q9NPB3 220 aa11.67□□□□□ -0.54
CDH11-202ENST00000394156 FGD1P98174 961 aa11.67□□□□□ -0.54
CDH11-202ENST00000394156 GOLGA2Q08379 1002 aa11.67□□□□□ -0.54
CDH11-202ENST00000394156 NOP58Q9Y2X3 529 aaKnown RBP11.67□□□□□ -0.54
CDH11-202ENST00000394156 CCDC144AA2RUR9 1427 aa11.67□□□□□ -0.54
CDH11-202ENST00000394156 CUX1P39880 1505 aa11.67□□□□□ -0.54
CDH11-202ENST00000394156 HMOX1P09601 288 aa11.67□□□□□ -0.54
CDH11-202ENST00000394156 ARAP1Q96P48 1450 aa11.66□□□□□ -0.54
CDH11-202ENST00000394156 MFAP1P55081 439 aaKnown RBP11.65□□□□□ -0.54
CDH11-202ENST00000394156 DDRGK1Q96HY6 314 aa11.65□□□□□ -0.54
CDH11-202ENST00000394156 CFTRP13569 1480 aa11.65□□□□□ -0.54
CDH11-202ENST00000394156 ARHGAP5Q13017 1502 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms