RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 PTPRTO14522 1441 aa18.6■□□□□ 0.57
VTI1BP2-201ENST00000394154 UHRF1BP1Q6BDS2 1440 aa18.59■□□□□ 0.57
VTI1BP2-201ENST00000394154 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.58■□□□□ 0.56
VTI1BP2-201ENST00000394154 HNRNPUL2Q1KMD3 747 aaKnown RBP18.58■□□□□ 0.56
VTI1BP2-201ENST00000394154 LTBP4Q8N2S1 1624 aa18.56■□□□□ 0.56
VTI1BP2-201ENST00000394154 HECW1Q76N89 1606 aa18.56■□□□□ 0.56
VTI1BP2-201ENST00000394154 P3H3Q8IVL6 736 aa18.55■□□□□ 0.56
VTI1BP2-201ENST00000394154 SETD1BQ9UPS6 1966 aaKnown RBP18.54■□□□□ 0.56
VTI1BP2-201ENST00000394154 CEBPAP49715 358 aaPredicted RBP18.53■□□□□ 0.56
VTI1BP2-201ENST00000394154 C9orf84Q5VXU9 1444 aa18.51■□□□□ 0.55
VTI1BP2-201ENST00000394154 ATP10AO60312 1499 aa18.51■□□□□ 0.55
VTI1BP2-201ENST00000394154 NUP153P49790 1475 aaKnown RBP18.51■□□□□ 0.55
VTI1BP2-201ENST00000394154 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.5■□□□□ 0.55
VTI1BP2-201ENST00000394154 PRXQ9BXM0 1461 aa18.5■□□□□ 0.55
VTI1BP2-201ENST00000394154 SAMD9Q5K651 1589 aa18.5■□□□□ 0.55
VTI1BP2-201ENST00000394154 FOXD1Q16676 465 aa18.49■□□□□ 0.55
VTI1BP2-201ENST00000394154 PLEKHD1A6NEE1 506 aa18.48■□□□□ 0.55
VTI1BP2-201ENST00000394154 SCAPERQ9BY12 1400 aa18.45■□□□□ 0.54
VTI1BP2-201ENST00000394154 NCOA1Q15788 1441 aa18.42■□□□□ 0.54
VTI1BP2-201ENST00000394154 UBAP1LF5GYI3 381 aa18.41■□□□□ 0.54
VTI1BP2-201ENST00000394154 C3P01024 1663 aa18.41■□□□□ 0.54
VTI1BP2-201ENST00000394154 MED1Q15648 1581 aaPredicted RBP18.38■□□□□ 0.53
VTI1BP2-201ENST00000394154 PLCH2O75038 1416 aa18.38■□□□□ 0.53
VTI1BP2-201ENST00000394154 TRAPPC8Q9Y2L5 1435 aa18.37■□□□□ 0.53
VTI1BP2-201ENST00000394154 REREQ9P2R6 1566 aa18.34■□□□□ 0.53
VTI1BP2-201ENST00000394154 ZNF518AQ6AHZ1 1483 aa18.33■□□□□ 0.53
VTI1BP2-201ENST00000394154 CAMSAP1Q5T5Y3 1602 aa18.32■□□□□ 0.52
VTI1BP2-201ENST00000394154 ZNF335Q9H4Z2 1342 aaPredicted RBP18.31■□□□□ 0.52
VTI1BP2-201ENST00000394154 KDM5CP41229 1560 aa18.31■□□□□ 0.52
VTI1BP2-201ENST00000394154 ESF1Q9H501 851 aaKnown RBP18.31■□□□□ 0.52
VTI1BP2-201ENST00000394154 DIP2CQ9Y2E4 1556 aa18.3■□□□□ 0.52
VTI1BP2-201ENST00000394154 MYO5CQ9NQX4 1742 aa18.3■□□□□ 0.52
VTI1BP2-201ENST00000394154 EFCAB2Q5VUJ9 269 aa18.3■□□□□ 0.52
VTI1BP2-201ENST00000394154 AGLP35573 1532 aa18.28■□□□□ 0.52
VTI1BP2-201ENST00000394154 CNTLNQ9NXG0 1405 aa18.27■□□□□ 0.52
VTI1BP2-201ENST00000394154 NPATQ14207 1427 aa18.25■□□□□ 0.51
VTI1BP2-201ENST00000394154 HSPA1LP34931 641 aa18.25■□□□□ 0.51
VTI1BP2-201ENST00000394154 MYT1LQ9UL68 1186 aa18.25■□□□□ 0.51
VTI1BP2-201ENST00000394154 CDK13Q14004 1512 aaKnown RBP18.24■□□□□ 0.51
VTI1BP2-201ENST00000394154 ABCA6Q8N139 1617 aa18.24■□□□□ 0.51
VTI1BP2-201ENST00000394154 NCKAP5LQ9HCH0 1330 aa18.23■□□□□ 0.51
VTI1BP2-201ENST00000394154 AFAP1Q8N556 730 aa18.23■□□□□ 0.51
VTI1BP2-201ENST00000394154 MROH2AA6NES4 1674 aa18.22■□□□□ 0.51
VTI1BP2-201ENST00000394154 PLA2R1Q13018 1463 aa18.21■□□□□ 0.51
VTI1BP2-201ENST00000394154 MLH3Q9UHC1 1453 aa18.21■□□□□ 0.51
VTI1BP2-201ENST00000394154 PKD2Q13563 968 aa18.21■□□□□ 0.51
VTI1BP2-201ENST00000394154 SCAF1Q9H7N4 1312 aaKnown RBP18.21■□□□□ 0.51
VTI1BP2-201ENST00000394154 ARHGAP5Q13017 1502 aa18.19■□□□□ 0.5
VTI1BP2-201ENST00000394154 ZNF142P52746 1687 aaPredicted RBP18.19■□□□□ 0.5
VTI1BP2-201ENST00000394154 RANGAP1P46060 587 aaPredicted RBP18.19■□□□□ 0.5
VTI1BP2-201ENST00000394154 SUPT6HQ7KZ85 1726 aaKnown RBP18.18■□□□□ 0.5
VTI1BP2-201ENST00000394154 TOM1O60784 492 aa18.17■□□□□ 0.5
VTI1BP2-201ENST00000394154 PIP4K2BP78356 416 aa18.17■□□□□ 0.5
VTI1BP2-201ENST00000394154 TCOF1Q13428 1488 aaKnown RBP18.17■□□□□ 0.5
VTI1BP2-201ENST00000394154 KIF14Q15058 1648 aa18.16■□□□□ 0.5
VTI1BP2-201ENST00000394154 MYO3AQ8NEV4 1616 aa18.15■□□□□ 0.5
VTI1BP2-201ENST00000394154 PPP6R1Q9UPN7 881 aa18.14■□□□□ 0.49
VTI1BP2-201ENST00000394154 ZMYM3Q14202 1370 aa18.13■□□□□ 0.49
VTI1BP2-201ENST00000394154 CPS1P31327 1500 aa18.13■□□□□ 0.49
VTI1BP2-201ENST00000394154 CEP170BQ9Y4F5 1589 aaPredicted RBP18.13■□□□□ 0.49
VTI1BP2-201ENST00000394154 CSRNP3Q8WYN3 585 aa18.12■□□□□ 0.49
VTI1BP2-201ENST00000394154 CDK11AQ9UQ88 783 aaPredicted RBP18.11■□□□□ 0.49
VTI1BP2-201ENST00000394154 KIDINS220Q9ULH0 1771 aa18.09■□□□□ 0.49
VTI1BP2-201ENST00000394154 ABCC1P33527 1531 aa18.08■□□□□ 0.49
VTI1BP2-201ENST00000394154 CDC42BPBQ9Y5S2 1711 aa18.07■□□□□ 0.48
VTI1BP2-201ENST00000394154 ITSN2Q9NZM3 1697 aa18.07■□□□□ 0.48
VTI1BP2-201ENST00000394154 CLIP1P30622 1438 aa18.06■□□□□ 0.48
VTI1BP2-201ENST00000394154 TROQ12816 1431 aaPredicted RBP18.06■□□□□ 0.48
VTI1BP2-201ENST00000394154 PTPRKQ15262 1439 aa18.06■□□□□ 0.48
VTI1BP2-201ENST00000394154 CLTCQ00610 1675 aaKnown RBP18.05■□□□□ 0.48
VTI1BP2-201ENST00000394154 SHANK2Q9UPX8 1470 aa18.04■□□□□ 0.48
VTI1BP2-201ENST00000394154 PREX2Q70Z35 1606 aa18.03■□□□□ 0.48
VTI1BP2-201ENST00000394154 POLR1AO95602 1720 aaPredicted RBP18.03■□□□□ 0.48
VTI1BP2-201ENST00000394154 ATP1B4Q9UN42 357 aaPredicted RBP18.02■□□□□ 0.48
VTI1BP2-201ENST00000394154 FMN1Q68DA7 1419 aa18■□□□□ 0.47
VTI1BP2-201ENST00000394154 ALKQ9UM73 1620 aa18■□□□□ 0.47
VTI1BP2-201ENST00000394154 A2ML1A8K2U0 1454 aa18■□□□□ 0.47
VTI1BP2-201ENST00000394154 DNMT1P26358 1616 aaKnown RBP17.99■□□□□ 0.47
VTI1BP2-201ENST00000394154 NEURL4Q96JN8 1562 aa17.98■□□□□ 0.47
VTI1BP2-201ENST00000394154 SAMD9LQ8IVG5 1584 aa17.97■□□□□ 0.47
VTI1BP2-201ENST00000394154 RGS17Q9UGC6 210 aaPredicted RBP17.95■□□□□ 0.46
VTI1BP2-201ENST00000394154 EEA1Q15075 1411 aa17.95■□□□□ 0.46
VTI1BP2-201ENST00000394154 PLXNC1O60486 1568 aa17.95■□□□□ 0.46
VTI1BP2-201ENST00000394154 VWDEQ8N2E2 1590 aa17.95■□□□□ 0.46
VTI1BP2-201ENST00000394154 SPAG9O60271 1321 aaKnown RBP17.91■□□□□ 0.46
VTI1BP2-201ENST00000394154 A2MP01023 1474 aa17.9■□□□□ 0.46
VTI1BP2-201ENST00000394154 ATP7AQ04656 1500 aa17.9■□□□□ 0.46
VTI1BP2-201ENST00000394154 RNF17Q9BXT8 1623 aaKnown RBP17.9■□□□□ 0.46
VTI1BP2-201ENST00000394154 CDC42BPAQ5VT25 1732 aa17.89■□□□□ 0.46
VTI1BP2-201ENST00000394154 LRRIQ1Q96JM4 1722 aa17.89■□□□□ 0.46
VTI1BP2-201ENST00000394154 GGT6Q6P531 493 aa17.89■□□□□ 0.45
VTI1BP2-201ENST00000394154 SYCP2Q9BX26 1530 aa17.88■□□□□ 0.45
VTI1BP2-201ENST00000394154 ANKLE2Q86XL3 938 aa17.87■□□□□ 0.45
VTI1BP2-201ENST00000394154 INO80Q9ULG1 1556 aaPredicted RBP17.87■□□□□ 0.45
VTI1BP2-201ENST00000394154 SYNMO15061 1565 aa17.86■□□□□ 0.45
VTI1BP2-201ENST00000394154 DEPDC5O75140 1603 aa17.86■□□□□ 0.45
VTI1BP2-201ENST00000394154 MED14O60244 1454 aa17.85■□□□□ 0.45
VTI1BP2-201ENST00000394154 NPHP4O75161 1426 aaPredicted RBP17.85■□□□□ 0.45
VTI1BP2-201ENST00000394154 ARHGAP35Q9NRY4 1499 aa17.84■□□□□ 0.45
VTI1BP2-201ENST00000394154 TNRQ92752 1358 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms