RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 RPRD2Q5VT52 1461 aaKnown RBP30.9■■■□□ 2.54
RARA-202ENST00000394081 MPHOSPH9Q99550 1183 aa30.89■■■□□ 2.54
RARA-202ENST00000394081 ANP32AP39687 249 aaKnown RBP30.87■■■□□ 2.53
RARA-202ENST00000394081 IPO9Q96P70 1041 aaKnown RBP30.87■■■□□ 2.53
RARA-202ENST00000394081 TEX14Q8IWB6 1497 aa30.86■■■□□ 2.53
RARA-202ENST00000394081 KDM6BO15054 1643 aa30.86■■■□□ 2.53
RARA-202ENST00000394081 RRP7BPQ9NSQ0 103 aa30.86■■■□□ 2.53
RARA-202ENST00000394081 NUDCQ9Y266 331 aa30.85■■■□□ 2.53
RARA-202ENST00000394081 MAGI3Q5TCQ9 1506 aa30.84■■■□□ 2.53
RARA-202ENST00000394081 KIF7Q2M1P5 1343 aa30.84■■■□□ 2.53
RARA-202ENST00000394081 PAK3O75914 559 aaPredicted RBP30.83■■■□□ 2.53
RARA-202ENST00000394081 ANKRD30BQ9BXX2 1392 aa30.83■■■□□ 2.53
RARA-202ENST00000394081 ROCK1Q13464 1354 aa30.79■■■□□ 2.52
RARA-202ENST00000394081 CCDC136Q96JN2 1154 aa30.77■■■□□ 2.52
RARA-202ENST00000394081 NBR1Q14596 966 aa30.74■■■□□ 2.51
RARA-202ENST00000394081 NBPF8Q3BBV2 869 aa30.73■■■□□ 2.51
RARA-202ENST00000394081 RTL5Q5HYW3 569 aaPredicted RBP30.73■■■□□ 2.51
RARA-202ENST00000394081 DHX29Q7Z478 1369 aaKnown RBP30.73■■■□□ 2.51
RARA-202ENST00000394081 ARID4BQ4LE39 1312 aaPredicted RBP30.72■■■□□ 2.51
RARA-202ENST00000394081 ZBTB47Q9UFB7 747 aaPredicted RBP30.72■■■□□ 2.51
RARA-202ENST00000394081 CHIC2Q9UKJ5 165 aa30.72■■■□□ 2.51
RARA-202ENST00000394081 NESP48681 1621 aa30.65■■■□□ 2.5
RARA-202ENST00000394081 EPRSP07814 1512 aaKnown RBP30.65■■■□□ 2.5
RARA-202ENST00000394081 GAPVD1Q14C86 1478 aa30.62■■■□□ 2.49
RARA-202ENST00000394081 MBD5Q9P267 1494 aa30.61■■■□□ 2.49
RARA-202ENST00000394081 DNMT1P26358 1616 aaKnown RBP30.61■■■□□ 2.49
RARA-202ENST00000394081 DAPK1P53355 1430 aa30.6■■■□□ 2.49
RARA-202ENST00000394081 ROCK2O75116 1388 aaKnown RBP30.59■■■□□ 2.49
RARA-202ENST00000394081 LAMC3Q9Y6N6 1575 aa30.58■■■□□ 2.49
RARA-202ENST00000394081 USP35Q9P2H5 1018 aa30.57■■■□□ 2.48
RARA-202ENST00000394081 FOXD1Q16676 465 aa30.54■■■□□ 2.48
RARA-202ENST00000394081 KIF14Q15058 1648 aa30.54■■■□□ 2.48
RARA-202ENST00000394081 TCERG1O14776 1098 aaKnown RBP30.53■■■□□ 2.48
RARA-202ENST00000394081 PNISRQ8TF01 805 aaKnown RBP30.53■■■□□ 2.48
RARA-202ENST00000394081 KTN1Q86UP2 1357 aaKnown RBP30.53■■■□□ 2.48
RARA-202ENST00000394081 BCORL1Q5H9F3 1711 aa30.53■■■□□ 2.48
RARA-202ENST00000394081 WDR62O43379 1518 aa30.52■■■□□ 2.48
RARA-202ENST00000394081 URB2Q14146 1524 aaKnown RBP30.51■■■□□ 2.48
RARA-202ENST00000394081 LRPPRCP42704 1394 aaKnown RBP30.51■■■□□ 2.47
RARA-202ENST00000394081 USP47Q96K76 1375 aa30.5■■■□□ 2.47
RARA-202ENST00000394081 ABCC5O15440 1437 aa30.5■■■□□ 2.47
RARA-202ENST00000394081 KDM5CP41229 1560 aa30.5■■■□□ 2.47
RARA-202ENST00000394081 SLC4A1APQ9BWU0 796 aaKnown RBP30.48■■■□□ 2.47
RARA-202ENST00000394081 TDRD9Q8NDG6 1382 aaKnown RBP30.47■■■□□ 2.47
RARA-202ENST00000394081 MS4A1P11836 297 aa30.45■■■□□ 2.47
RARA-202ENST00000394081 PRKCSHP14314 528 aaPredicted RBP30.45■■■□□ 2.46
RARA-202ENST00000394081 PZPP20742 1482 aa30.45■■■□□ 2.46
RARA-202ENST00000394081 CDK13Q14004 1512 aaKnown RBP30.44■■■□□ 2.46
RARA-202ENST00000394081 IQGAP2Q13576 1575 aa30.44■■■□□ 2.46
RARA-202ENST00000394081 BRD4O60885 1362 aaPredicted RBP30.44■■■□□ 2.46
RARA-202ENST00000394081 KIF15Q9NS87 1388 aa30.42■■■□□ 2.46
RARA-202ENST00000394081 TMC1Q8TDI8 760 aa30.42■■■□□ 2.46
RARA-202ENST00000394081 UHRF1BP1Q6BDS2 1440 aa30.41■■■□□ 2.46
RARA-202ENST00000394081 RRP1P56182 461 aaKnown RBP30.4■■■□□ 2.46
RARA-202ENST00000394081 KIAA1107Q9UPP5 1409 aa30.38■■■□□ 2.45
RARA-202ENST00000394081 RALGAPBQ86X10 1494 aa30.37■■■□□ 2.45
RARA-202ENST00000394081 PPM1GO15355 546 aaPredicted RBP30.36■■■□□ 2.45
RARA-202ENST00000394081 ADGBQ8N7X0 1667 aa30.34■■■□□ 2.45
RARA-202ENST00000394081 PDE3BQ13370 1112 aa30.34■■■□□ 2.45
RARA-202ENST00000394081 RALBP1Q15311 655 aa30.34■■■□□ 2.45
RARA-202ENST00000394081 BACH2Q9BYV9 841 aa30.33■■■□□ 2.45
RARA-202ENST00000394081 PDE4AP27815 886 aa30.33■■■□□ 2.45
RARA-202ENST00000394081 MYBBP1AQ9BQG0 1328 aaKnown RBP30.32■■■□□ 2.44
RARA-202ENST00000394081 WASHC2CQ9Y4E1 1318 aa30.32■■■□□ 2.44
RARA-202ENST00000394081 ARHGEF12Q9NZN5 1544 aa30.31■■■□□ 2.44
RARA-202ENST00000394081 ADGRL2O95490 1459 aa30.29■■■□□ 2.44
RARA-202ENST00000394081 E9PCH4 1651 aa30.28■■■□□ 2.44
RARA-202ENST00000394081 TARBP1Q13395 1621 aaKnown RBP30.28■■■□□ 2.44
RARA-202ENST00000394081 RCAN3Q9UKA8 241 aa30.27■■■□□ 2.44
RARA-202ENST00000394081 NEFMP07197 916 aa30.26■■■□□ 2.43
RARA-202ENST00000394081 EXOC6Q8TAG9 804 aa30.25■■■□□ 2.43
RARA-202ENST00000394081 INSRP06213 1382 aa30.25■■■□□ 2.43
RARA-202ENST00000394081 PBRM1Q86U86 1689 aa30.24■■■□□ 2.43
RARA-202ENST00000394081 ZMYM4Q5VZL5 1548 aa30.24■■■□□ 2.43
RARA-202ENST00000394081 DDRGK1Q96HY6 314 aa30.23■■■□□ 2.43
RARA-202ENST00000394081 ERCC6Q03468 1493 aa30.23■■■□□ 2.43
RARA-202ENST00000394081 ANO8Q9HCE9 1232 aaPredicted RBP30.22■■■□□ 2.43
RARA-202ENST00000394081 ADAMTS12P58397 1594 aa30.21■■■□□ 2.43
RARA-202ENST00000394081 ITSN2Q9NZM3 1697 aa30.21■■■□□ 2.43
RARA-202ENST00000394081 CROCC2H7BZ55 1655 aa30.2■■■□□ 2.42
RARA-202ENST00000394081 IL27Q8NEV9 243 aa30.19■■■□□ 2.42
RARA-202ENST00000394081 POLR3GLQ9BT43 218 aa30.19■■■□□ 2.42
RARA-202ENST00000394081 NPM2Q86SE8 214 aaKnown RBP30.19■■■□□ 2.42
RARA-202ENST00000394081 CAMSAP2Q08AD1 1489 aa30.17■■■□□ 2.42
RARA-202ENST00000394081 PDS5BQ9NTI5 1447 aa30.17■■■□□ 2.42
RARA-202ENST00000394081 ZNF644Q9H582 1327 aaPredicted RBP30.15■■■□□ 2.42
RARA-202ENST00000394081 NLRP13Q86W25 1043 aa30.14■■■□□ 2.42
RARA-202ENST00000394081 NUP153P49790 1475 aaKnown RBP30.14■■■□□ 2.42
RARA-202ENST00000394081 SALL2Q9Y467 1007 aaPredicted RBP30.13■■■□□ 2.41
RARA-202ENST00000394081 CARD11Q9BXL7 1154 aa30.12■■■□□ 2.41
RARA-202ENST00000394081 LAS1LQ9Y4W2 734 aaKnown RBP30.12■■■□□ 2.41
RARA-202ENST00000394081 PARD3Q8TEW0 1356 aa30.12■■■□□ 2.41
RARA-202ENST00000394081 RAPGEF6Q8TEU7 1601 aa30.11■■■□□ 2.41
RARA-202ENST00000394081 PKD2Q13563 968 aa30.11■■■□□ 2.41
RARA-202ENST00000394081 KIAA0556O60303 1618 aa30.1■■■□□ 2.41
RARA-202ENST00000394081 CNGB1Q14028 1251 aaPredicted RBP30.1■■■□□ 2.41
RARA-202ENST00000394081 ANKRD30AQ9BXX3 1397 aa30.09■■■□□ 2.41
RARA-202ENST00000394081 ZNF326Q5BKZ1 582 aaKnown RBP30.09■■■□□ 2.41
RARA-202ENST00000394081 KDM5DQ9BY66 1539 aa30.09■■■□□ 2.41
RARA-202ENST00000394081 TROQ12816 1431 aaPredicted RBP30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms