RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 TROQ12816 1431 aaPredicted RBP20.95■□□□□ 0.94
CDH16-202ENST00000394055 DENND4BO75064 1496 aaPredicted RBP20.94■□□□□ 0.94
CDH16-202ENST00000394055 ABCC5O15440 1437 aa20.94■□□□□ 0.94
CDH16-202ENST00000394055 FOXD1Q16676 465 aa20.93■□□□□ 0.94
CDH16-202ENST00000394055 ZNF777Q9ULD5 760 aaPredicted RBP20.93■□□□□ 0.94
CDH16-202ENST00000394055 CFDP1Q9UEE9 299 aaPredicted RBP20.92■□□□□ 0.94
CDH16-202ENST00000394055 MPHOSPH9Q99550 1183 aa20.91■□□□□ 0.94
CDH16-202ENST00000394055 KIF14Q15058 1648 aa20.91■□□□□ 0.94
CDH16-202ENST00000394055 DNMT1P26358 1616 aaKnown RBP20.9■□□□□ 0.94
CDH16-202ENST00000394055 KCNH8Q96L42 1107 aa20.9■□□□□ 0.94
CDH16-202ENST00000394055 CAMSAP2Q08AD1 1489 aa20.87■□□□□ 0.93
CDH16-202ENST00000394055 GPATCH8Q9UKJ3 1502 aaKnown RBP20.86■□□□□ 0.93
CDH16-202ENST00000394055 ROCK1Q13464 1354 aa20.86■□□□□ 0.93
CDH16-202ENST00000394055 KDM5BQ9UGL1 1544 aa20.86■□□□□ 0.93
CDH16-202ENST00000394055 PLEKHD1A6NEE1 506 aa20.83■□□□□ 0.93
CDH16-202ENST00000394055 ABCA8O94911 1581 aa20.83■□□□□ 0.92
CDH16-202ENST00000394055 ITSN2Q9NZM3 1697 aa20.82■□□□□ 0.92
CDH16-202ENST00000394055 ATP10BO94823 1461 aa20.81■□□□□ 0.92
CDH16-202ENST00000394055 ADCY10Q96PN6 1610 aa20.8■□□□□ 0.92
CDH16-202ENST00000394055 SLC4A1APQ9BWU0 796 aaKnown RBP20.79■□□□□ 0.92
CDH16-202ENST00000394055 PTPRGP23470 1445 aa20.77■□□□□ 0.92
CDH16-202ENST00000394055 L3MBTL2Q969R5 705 aa20.77■□□□□ 0.92
CDH16-202ENST00000394055 NCOA1Q15788 1441 aa20.75■□□□□ 0.91
CDH16-202ENST00000394055 CHD1O14646 1710 aa20.75■□□□□ 0.91
CDH16-202ENST00000394055 ANKRD30BQ9BXX2 1392 aa20.73■□□□□ 0.91
CDH16-202ENST00000394055 CDC42BPAQ5VT25 1732 aa20.72■□□□□ 0.91
CDH16-202ENST00000394055 ABCC10Q5T3U5 1492 aa20.72■□□□□ 0.91
CDH16-202ENST00000394055 HSPA5P11021 654 aaKnown RBP20.71■□□□□ 0.91
CDH16-202ENST00000394055 BCL11AQ9H165 835 aa20.71■□□□□ 0.91
CDH16-202ENST00000394055 ANP32CO43423 234 aa20.7■□□□□ 0.9
CDH16-202ENST00000394055 ADGBQ8N7X0 1667 aa20.7■□□□□ 0.9
CDH16-202ENST00000394055 CROCC2H7BZ55 1655 aa20.69■□□□□ 0.9
CDH16-202ENST00000394055 ANKRD30AQ9BXX3 1397 aa20.69■□□□□ 0.9
CDH16-202ENST00000394055 PZPP20742 1482 aa20.68■□□□□ 0.9
CDH16-202ENST00000394055 RPRD2Q5VT52 1461 aaKnown RBP20.68■□□□□ 0.9
CDH16-202ENST00000394055 ADGRL2O95490 1459 aa20.67■□□□□ 0.9
CDH16-202ENST00000394055 HNRNPMP52272 730 aaKnown RBP eCLIP20.66■□□□□ 0.9
CDH16-202ENST00000394055 EIF4G2P78344 907 aaKnown RBP eCLIP20.64■□□□□ 0.9
CDH16-202ENST00000394055 NBPF8Q3BBV2 869 aa20.64■□□□□ 0.9
CDH16-202ENST00000394055 C9orf84Q5VXU9 1444 aa20.64■□□□□ 0.89
CDH16-202ENST00000394055 ANKRD50Q9ULJ7 1429 aa20.64■□□□□ 0.89
CDH16-202ENST00000394055 TEX14Q8IWB6 1497 aa20.63■□□□□ 0.89
CDH16-202ENST00000394055 WASHC2AQ641Q2 1341 aa20.62■□□□□ 0.89
CDH16-202ENST00000394055 ERCC6L2Q5T890 1561 aa20.62■□□□□ 0.89
CDH16-202ENST00000394055 PKD2Q13563 968 aa20.62■□□□□ 0.89
CDH16-202ENST00000394055 TSPY4P0CV99 314 aa20.62■□□□□ 0.89
CDH16-202ENST00000394055 TSPY10P0CW01 314 aa20.62■□□□□ 0.89
CDH16-202ENST00000394055 CCER2I3L3R5 266 aa20.58■□□□□ 0.89
CDH16-202ENST00000394055 KIAA1107Q9UPP5 1409 aa20.58■□□□□ 0.88
CDH16-202ENST00000394055 SHROOM2Q13796 1616 aa20.57■□□□□ 0.88
CDH16-202ENST00000394055 NUP155O75694 1391 aa20.57■□□□□ 0.88
CDH16-202ENST00000394055 SHANK2Q9UPX8 1470 aa20.56■□□□□ 0.88
CDH16-202ENST00000394055 ZNF326Q5BKZ1 582 aaKnown RBP20.55■□□□□ 0.88
CDH16-202ENST00000394055 C11orf95C9JLR9 678 aaPredicted RBP20.55■□□□□ 0.88
CDH16-202ENST00000394055 KIF15Q9NS87 1388 aa20.55■□□□□ 0.88
CDH16-202ENST00000394055 SAMD9LQ8IVG5 1584 aa20.54■□□□□ 0.88
CDH16-202ENST00000394055 MBD5Q9P267 1494 aa20.54■□□□□ 0.88
CDH16-202ENST00000394055 CDC42BPBQ9Y5S2 1711 aa20.54■□□□□ 0.88
CDH16-202ENST00000394055 PREX2Q70Z35 1606 aa20.52■□□□□ 0.88
CDH16-202ENST00000394055 SUPT16HQ9Y5B9 1047 aaKnown RBP20.51■□□□□ 0.87
CDH16-202ENST00000394055 TTC37Q6PGP7 1564 aa20.51■□□□□ 0.87
CDH16-202ENST00000394055 CCDC141Q6ZP82 1450 aa20.5■□□□□ 0.87
CDH16-202ENST00000394055 ARHGEF5Q12774 1597 aa20.5■□□□□ 0.87
CDH16-202ENST00000394055 ARHGAP5Q13017 1502 aa20.49■□□□□ 0.87
CDH16-202ENST00000394055 ABCC2Q92887 1545 aa20.49■□□□□ 0.87
CDH16-202ENST00000394055 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.47■□□□□ 0.87
CDH16-202ENST00000394055 SYCP2Q9BX26 1530 aa20.47■□□□□ 0.87
CDH16-202ENST00000394055 CCDC7Q96M83 1385 aa20.47■□□□□ 0.87
CDH16-202ENST00000394055 CNTLNQ9NXG0 1405 aa20.45■□□□□ 0.86
CDH16-202ENST00000394055 PRKCSHP14314 528 aaPredicted RBP20.44■□□□□ 0.86
CDH16-202ENST00000394055 SPATA31E1Q6ZUB1 1445 aa20.43■□□□□ 0.86
CDH16-202ENST00000394055 KIF7Q2M1P5 1343 aa20.42■□□□□ 0.86
CDH16-202ENST00000394055 CLASP1Q7Z460 1538 aa20.41■□□□□ 0.86
CDH16-202ENST00000394055 RSPH4AQ5TD94 716 aa20.4■□□□□ 0.86
CDH16-202ENST00000394055 KDM5DQ9BY66 1539 aa20.4■□□□□ 0.86
CDH16-202ENST00000394055 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.4■□□□□ 0.86
CDH16-202ENST00000394055 KDM2AQ9Y2K7 1162 aa20.4■□□□□ 0.86
CDH16-202ENST00000394055 POLR3GLQ9BT43 218 aa20.39■□□□□ 0.85
CDH16-202ENST00000394055 MYO5CQ9NQX4 1742 aa20.38■□□□□ 0.85
CDH16-202ENST00000394055 USP47Q96K76 1375 aa20.38■□□□□ 0.85
CDH16-202ENST00000394055 ZCCHC11Q5TAX3 1644 aaKnown RBP20.37■□□□□ 0.85
CDH16-202ENST00000394055 CCDC184Q52MB2 194 aa20.36■□□□□ 0.85
CDH16-202ENST00000394055 FAM135AQ9P2D6 1515 aa20.36■□□□□ 0.85
CDH16-202ENST00000394055 HNRNPUQ00839 825 aaKnown RBP eCLIP20.35■□□□□ 0.85
CDH16-202ENST00000394055 ARHGEF12Q9NZN5 1544 aa20.34■□□□□ 0.85
CDH16-202ENST00000394055 DCAF11Q8TEB1 546 aa20.34■□□□□ 0.85
CDH16-202ENST00000394055 CNGB1Q14028 1251 aaPredicted RBP20.34■□□□□ 0.85
CDH16-202ENST00000394055 BCANQ96GW7 911 aa20.34■□□□□ 0.85
CDH16-202ENST00000394055 PRKRIP1Q9H875 184 aaPredicted RBP20.33■□□□□ 0.84
CDH16-202ENST00000394055 FKBP8Q14318 412 aa20.32■□□□□ 0.84
CDH16-202ENST00000394055 PLEKHH2Q8IVE3 1493 aa20.31■□□□□ 0.84
CDH16-202ENST00000394055 CARD11Q9BXL7 1154 aa20.31■□□□□ 0.84
CDH16-202ENST00000394055 MAST1Q9Y2H9 1570 aa20.31■□□□□ 0.84
CDH16-202ENST00000394055 PLCH2O75038 1416 aa20.3■□□□□ 0.84
CDH16-202ENST00000394055 EFCAB2Q5VUJ9 269 aa20.3■□□□□ 0.84
CDH16-202ENST00000394055 BCORL1Q5H9F3 1711 aa20.3■□□□□ 0.84
CDH16-202ENST00000394055 UHRF1BP1LA0JNW5 1464 aa20.29■□□□□ 0.84
CDH16-202ENST00000394055 UHRF1BP1Q6BDS2 1440 aa20.29■□□□□ 0.84
CDH16-202ENST00000394055 RGL3Q3MIN7 710 aa20.28■□□□□ 0.84
CDH16-202ENST00000394055 POLR1AO95602 1720 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms