RNA–Protein interactions for RNA: ENST00000394053.6

MTHFD2-201, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD2, Length 4,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-201ENST00000394053 CCDC136Q96JN2 1154 aa14.18□□□□□ -0.14
MTHFD2-201ENST00000394053 PPM1GO15355 546 aaPredicted RBP14.17□□□□□ -0.14
MTHFD2-201ENST00000394053 LRRC9Q6ZRR7 1453 aa14.17□□□□□ -0.14
MTHFD2-201ENST00000394053 IFT140Q96RY7 1462 aa14.17□□□□□ -0.14
MTHFD2-201ENST00000394053 SAFB2Q14151 953 aaKnown RBP eCLIP14.17□□□□□ -0.14
MTHFD2-201ENST00000394053 CASKIN1Q8WXD9 1431 aa14.16□□□□□ -0.14
MTHFD2-201ENST00000394053 TNNT2P45379 298 aaPredicted RBP14.16□□□□□ -0.14
MTHFD2-201ENST00000394053 DNMBPQ6XZF7 1577 aa14.16□□□□□ -0.14
MTHFD2-201ENST00000394053 FGD6Q6ZV73 1430 aa14.16□□□□□ -0.14
MTHFD2-201ENST00000394053 RTL5Q5HYW3 569 aaPredicted RBP14.15□□□□□ -0.14
MTHFD2-201ENST00000394053 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.15□□□□□ -0.14
MTHFD2-201ENST00000394053 CFAP53Q96M91 514 aa14.15□□□□□ -0.14
MTHFD2-201ENST00000394053 MYOM3Q5VTT5 1437 aa14.14□□□□□ -0.15
MTHFD2-201ENST00000394053 WASHC2CQ9Y4E1 1318 aa14.14□□□□□ -0.15
MTHFD2-201ENST00000394053 STK26Q9P289 416 aa14.13□□□□□ -0.15
MTHFD2-201ENST00000394053 ZBTB7CA1YPR0 619 aa14.13□□□□□ -0.15
MTHFD2-201ENST00000394053 ROCK2O75116 1388 aaKnown RBP14.12□□□□□ -0.15
MTHFD2-201ENST00000394053 NEUROD2Q15784 382 aa14.11□□□□□ -0.15
MTHFD2-201ENST00000394053 LAMC3Q9Y6N6 1575 aa14.11□□□□□ -0.15
MTHFD2-201ENST00000394053 HDGFP51858 240 aaKnown RBP14.11□□□□□ -0.15
MTHFD2-201ENST00000394053 NPM2Q86SE8 214 aaKnown RBP14.11□□□□□ -0.15
MTHFD2-201ENST00000394053 SUPT16HQ9Y5B9 1047 aaKnown RBP14.11□□□□□ -0.15
MTHFD2-201ENST00000394053 SRPK2P78362 688 aaKnown RBP14.1□□□□□ -0.15
MTHFD2-201ENST00000394053 PRG4Q92954 1404 aaPredicted RBP14.1□□□□□ -0.15
MTHFD2-201ENST00000394053 ABCA10Q8WWZ4 1543 aa14.09□□□□□ -0.15
MTHFD2-201ENST00000394053 NCOA2Q15596 1464 aa14.09□□□□□ -0.15
MTHFD2-201ENST00000394053 SNAPC4Q5SXM2 1469 aa14.09□□□□□ -0.15
MTHFD2-201ENST00000394053 PRDM2Q13029 1718 aa14.08□□□□□ -0.15
MTHFD2-201ENST00000394053 ANP32AP39687 249 aaKnown RBP14.07□□□□□ -0.16
MTHFD2-201ENST00000394053 NUTM2DQ5VT03 806 aaPredicted RBP14.07□□□□□ -0.16
MTHFD2-201ENST00000394053 FYCO1Q9BQS8 1478 aa14.07□□□□□ -0.16
MTHFD2-201ENST00000394053 CCER2I3L3R5 266 aa14.06□□□□□ -0.16
MTHFD2-201ENST00000394053 MYT1Q01538 1121 aa14.06□□□□□ -0.16
MTHFD2-201ENST00000394053 LMOD2Q6P5Q4 547 aa14.04□□□□□ -0.16
MTHFD2-201ENST00000394053 NUDCQ9Y266 331 aa14.04□□□□□ -0.16
MTHFD2-201ENST00000394053 CCDC144AA2RUR9 1427 aa14.04□□□□□ -0.16
MTHFD2-201ENST00000394053 EFCAB5A4FU69 1503 aa14.03□□□□□ -0.16
MTHFD2-201ENST00000394053 U2SURPO15042 1029 aaKnown RBP14.03□□□□□ -0.16
MTHFD2-201ENST00000394053 AFAP1Q8N556 730 aa14.02□□□□□ -0.16
MTHFD2-201ENST00000394053 KIF15Q9NS87 1388 aa14.02□□□□□ -0.16
MTHFD2-201ENST00000394053 ST20-MTHFSA0A0A6YYL1 179 aa14.02□□□□□ -0.16
MTHFD2-201ENST00000394053 URB2Q14146 1524 aaKnown RBP14.02□□□□□ -0.17
MTHFD2-201ENST00000394053 MORC1Q86VD1 984 aa14.01□□□□□ -0.17
MTHFD2-201ENST00000394053 FAM69CQ0P6D2 419 aa14.01□□□□□ -0.17
MTHFD2-201ENST00000394053 RRBP1Q9P2E9 1410 aaKnown RBP14□□□□□ -0.17
MTHFD2-201ENST00000394053 MAPK8IP3Q9UPT6 1336 aa14□□□□□ -0.17
MTHFD2-201ENST00000394053 SYNJ2O15056 1496 aa14□□□□□ -0.17
MTHFD2-201ENST00000394053 KIAA0586Q9BVV6 1533 aa13.99□□□□□ -0.17
MTHFD2-201ENST00000394053 SOX12O15370 315 aa13.99□□□□□ -0.17
MTHFD2-201ENST00000394053 UACAQ9BZF9 1416 aa13.98□□□□□ -0.17
MTHFD2-201ENST00000394053 ANKRD50Q9ULJ7 1429 aa13.98□□□□□ -0.17
MTHFD2-201ENST00000394053 TRAK1Q9UPV9 953 aa13.98□□□□□ -0.17
MTHFD2-201ENST00000394053 KTN1Q86UP2 1357 aaKnown RBP13.97□□□□□ -0.17
MTHFD2-201ENST00000394053 HAP1P54257 671 aaPredicted RBP13.97□□□□□ -0.17
MTHFD2-201ENST00000394053 LAS1LQ9Y4W2 734 aaKnown RBP13.97□□□□□ -0.17
MTHFD2-201ENST00000394053 A0A0G2JS52 829 aa13.96□□□□□ -0.18
MTHFD2-201ENST00000394053 UPF2Q9HAU5 1272 aaKnown RBP13.95□□□□□ -0.18
MTHFD2-201ENST00000394053 TROQ12816 1431 aaPredicted RBP13.94□□□□□ -0.18
MTHFD2-201ENST00000394053 ZNF608Q9ULD9 1512 aaPredicted RBP13.94□□□□□ -0.18
MTHFD2-201ENST00000394053 TIAM1Q13009 1591 aa13.94□□□□□ -0.18
MTHFD2-201ENST00000394053 RALBP1Q15311 655 aa13.94□□□□□ -0.18
MTHFD2-201ENST00000394053 HDGFL2Q7Z4V5 671 aaPredicted RBP13.93□□□□□ -0.18
MTHFD2-201ENST00000394053 EIF3AQ14152 1382 aaKnown RBP13.92□□□□□ -0.18
MTHFD2-201ENST00000394053 FRAT1Q92837 279 aaPredicted RBP13.91□□□□□ -0.18
MTHFD2-201ENST00000394053 VGFO15240 615 aaPredicted RBP13.91□□□□□ -0.18
MTHFD2-201ENST00000394053 ARHGAP5Q13017 1502 aa13.9□□□□□ -0.18
MTHFD2-201ENST00000394053 USP47Q96K76 1375 aa13.9□□□□□ -0.18
MTHFD2-201ENST00000394053 IQGAP2Q13576 1575 aa13.9□□□□□ -0.18
MTHFD2-201ENST00000394053 MIA2Q96PC5 1412 aa13.9□□□□□ -0.18
MTHFD2-201ENST00000394053 BIVM-ERCC5R4GMW8 1640 aa13.9□□□□□ -0.18
MTHFD2-201ENST00000394053 EID1Q9Y6B2 187 aa13.9□□□□□ -0.19
MTHFD2-201ENST00000394053 EPRSP07814 1512 aaKnown RBP13.89□□□□□ -0.19
MTHFD2-201ENST00000394053 MYH16Q9H6N6 1097 aa13.89□□□□□ -0.19
MTHFD2-201ENST00000394053 CDK13Q14004 1512 aaKnown RBP13.89□□□□□ -0.19
MTHFD2-201ENST00000394053 EHBP1L1Q8N3D4 1523 aa13.89□□□□□ -0.19
MTHFD2-201ENST00000394053 FTSJ3Q8IY81 847 aaKnown RBP13.88□□□□□ -0.19
MTHFD2-201ENST00000394053 GRIN2AQ12879 1464 aa13.88□□□□□ -0.19
MTHFD2-201ENST00000394053 U2AF1L5P0DN76 240 aaPredicted RBP13.88□□□□□ -0.19
MTHFD2-201ENST00000394053 U2AF1Q01081 240 aaKnown RBP eCLIP13.88□□□□□ -0.19
MTHFD2-201ENST00000394053 PANK3Q9H999 370 aa13.88□□□□□ -0.19
MTHFD2-201ENST00000394053 NLRP13Q86W25 1043 aa13.87□□□□□ -0.19
MTHFD2-201ENST00000394053 HSP90AA1P07900 732 aaKnown RBP13.87□□□□□ -0.19
MTHFD2-201ENST00000394053 PNNQ9H307 717 aaKnown RBP13.87□□□□□ -0.19
MTHFD2-201ENST00000394053 CUL7Q14999 1698 aa13.87□□□□□ -0.19
MTHFD2-201ENST00000394053 PPP4R2Q9NY27 417 aa13.87□□□□□ -0.19
MTHFD2-201ENST00000394053 NUTM2FA1L443 756 aa13.86□□□□□ -0.19
MTHFD2-201ENST00000394053 PLB1Q6P1J6 1458 aa13.86□□□□□ -0.19
MTHFD2-201ENST00000394053 TERF2IPQ9NYB0 399 aa13.86□□□□□ -0.19
MTHFD2-201ENST00000394053 HECW1Q76N89 1606 aa13.86□□□□□ -0.19
MTHFD2-201ENST00000394053 MAGI1Q96QZ7 1491 aaPredicted RBP13.85□□□□□ -0.19
MTHFD2-201ENST00000394053 B4GALNT3Q6L9W6 998 aa13.85□□□□□ -0.19
MTHFD2-201ENST00000394053 PRKRIP1Q9H875 184 aaPredicted RBP13.85□□□□□ -0.19
MTHFD2-201ENST00000394053 PAK3O75914 559 aaPredicted RBP13.85□□□□□ -0.19
MTHFD2-201ENST00000394053 HFM1A2PYH4 1435 aa13.84□□□□□ -0.19
MTHFD2-201ENST00000394053 C9orf84Q5VXU9 1444 aa13.84□□□□□ -0.19
MTHFD2-201ENST00000394053 PCF11O94913 1555 aaKnown RBP13.83□□□□□ -0.2
MTHFD2-201ENST00000394053 SCAPERQ9BY12 1400 aa13.82□□□□□ -0.2
MTHFD2-201ENST00000394053 RAPGEF3O95398 923 aa13.81□□□□□ -0.2
MTHFD2-201ENST00000394053 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.8□□□□□ -0.2
MTHFD2-201ENST00000394053 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.8□□□□□ -0.21e-6■■■■□ 19.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms