RNA–Protein interactions for RNA: ENST00000394023.7

SMARCC2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-203ENST00000394023 PRG4Q92954 1404 aaPredicted RBP25.68■■□□□ 1.7
SMARCC2-203ENST00000394023 IQGAP2Q13576 1575 aa25.67■■□□□ 1.7
SMARCC2-203ENST00000394023 ANKRD30AQ9BXX3 1397 aa25.66■■□□□ 1.7
SMARCC2-203ENST00000394023 SUPT6HQ7KZ85 1726 aaKnown RBP25.64■■□□□ 1.69
SMARCC2-203ENST00000394023 KIF21AQ7Z4S6 1674 aa25.61■■□□□ 1.69
SMARCC2-203ENST00000394023 CTTNBP2Q8WZ74 1663 aa25.59■■□□□ 1.69
SMARCC2-203ENST00000394023 KIAA0586Q9BVV6 1533 aa25.59■■□□□ 1.69
SMARCC2-203ENST00000394023 PTPRGP23470 1445 aa25.58■■□□□ 1.69
SMARCC2-203ENST00000394023 HECW1Q76N89 1606 aa25.58■■□□□ 1.69
SMARCC2-203ENST00000394023 WASHC2AQ641Q2 1341 aa25.58■■□□□ 1.68
SMARCC2-203ENST00000394023 CHGAP10645 457 aaKnown RBP25.57■■□□□ 1.68
SMARCC2-203ENST00000394023 PTPN23Q9H3S7 1636 aa25.55■■□□□ 1.68
SMARCC2-203ENST00000394023 NBPF8Q3BBV2 869 aa25.55■■□□□ 1.68
SMARCC2-203ENST00000394023 CFAP43Q8NDM7 1665 aa25.54■■□□□ 1.68
SMARCC2-203ENST00000394023 MIA2Q96PC5 1412 aa25.54■■□□□ 1.68
SMARCC2-203ENST00000394023 PLB1Q6P1J6 1458 aa25.53■■□□□ 1.68
SMARCC2-203ENST00000394023 GRIN2AQ12879 1464 aa25.49■■□□□ 1.67
SMARCC2-203ENST00000394023 THOC2Q8NI27 1593 aaKnown RBP25.49■■□□□ 1.67
SMARCC2-203ENST00000394023 DAPK1P53355 1430 aa25.48■■□□□ 1.67
SMARCC2-203ENST00000394023 ABCA5Q8WWZ7 1642 aa25.48■■□□□ 1.67
SMARCC2-203ENST00000394023 TROQ12816 1431 aaPredicted RBP25.47■■□□□ 1.67
SMARCC2-203ENST00000394023 NPM1P06748 294 aaKnown RBP eCLIP25.46■■□□□ 1.67
SMARCC2-203ENST00000394023 SENP3Q9H4L4 574 aaPredicted RBP25.46■■□□□ 1.67
SMARCC2-203ENST00000394023 PRKRIP1Q9H875 184 aaPredicted RBP25.45■■□□□ 1.66
SMARCC2-203ENST00000394023 ABCC5O15440 1437 aa25.42■■□□□ 1.66
SMARCC2-203ENST00000394023 UGGT2Q9NYU1 1516 aa25.42■■□□□ 1.66
SMARCC2-203ENST00000394023 ANKRD50Q9ULJ7 1429 aa25.41■■□□□ 1.66
SMARCC2-203ENST00000394023 ST20-MTHFSA0A0A6YYL1 179 aa25.41■■□□□ 1.66
SMARCC2-203ENST00000394023 C11orf95C9JLR9 678 aaPredicted RBP25.4■■□□□ 1.66
SMARCC2-203ENST00000394023 KIF7Q2M1P5 1343 aa25.4■■□□□ 1.66
SMARCC2-203ENST00000394023 CCDC184Q52MB2 194 aa25.38■■□□□ 1.65
SMARCC2-203ENST00000394023 CCDC7Q96M83 1385 aa25.37■■□□□ 1.65
SMARCC2-203ENST00000394023 CC2D1BQ5T0F9 858 aaKnown RBP25.37■■□□□ 1.65
SMARCC2-203ENST00000394023 MYT1Q01538 1121 aa25.37■■□□□ 1.65
SMARCC2-203ENST00000394023 TSHZ2Q9NRE2 1034 aa25.37■■□□□ 1.65
SMARCC2-203ENST00000394023 KIF15Q9NS87 1388 aa25.37■■□□□ 1.65
SMARCC2-203ENST00000394023 USP47Q96K76 1375 aa25.36■■□□□ 1.65
SMARCC2-203ENST00000394023 EFCAB2Q5VUJ9 269 aa25.36■■□□□ 1.65
SMARCC2-203ENST00000394023 ADAMTS12P58397 1594 aa25.35■■□□□ 1.65
SMARCC2-203ENST00000394023 MAGI3Q5TCQ9 1506 aa25.35■■□□□ 1.65
SMARCC2-203ENST00000394023 ROCK2O75116 1388 aaKnown RBP25.35■■□□□ 1.65
SMARCC2-203ENST00000394023 SYNJ2O15056 1496 aa25.35■■□□□ 1.65
SMARCC2-203ENST00000394023 SAMD9Q5K651 1589 aa25.34■■□□□ 1.65
SMARCC2-203ENST00000394023 NUP153P49790 1475 aaKnown RBP25.33■■□□□ 1.65
SMARCC2-203ENST00000394023 TARBP1Q13395 1621 aaKnown RBP25.33■■□□□ 1.65
SMARCC2-203ENST00000394023 B4GALNT3Q6L9W6 998 aa25.33■■□□□ 1.65
SMARCC2-203ENST00000394023 ANKRD30BQ9BXX2 1392 aa25.31■■□□□ 1.64
SMARCC2-203ENST00000394023 CCDC136Q96JN2 1154 aa25.3■■□□□ 1.64
SMARCC2-203ENST00000394023 RSPH4AQ5TD94 716 aa25.29■■□□□ 1.64
SMARCC2-203ENST00000394023 ROCK1Q13464 1354 aa25.28■■□□□ 1.64
SMARCC2-203ENST00000394023 MAGI1Q96QZ7 1491 aaPredicted RBP25.28■■□□□ 1.64
SMARCC2-203ENST00000394023 ARHGEF11O15085 1522 aa25.27■■□□□ 1.64
SMARCC2-203ENST00000394023 CAMSAP2Q08AD1 1489 aa25.26■■□□□ 1.63
SMARCC2-203ENST00000394023 WDR62O43379 1518 aa25.25■■□□□ 1.63
SMARCC2-203ENST00000394023 C9orf84Q5VXU9 1444 aa25.25■■□□□ 1.63
SMARCC2-203ENST00000394023 CNTLNQ9NXG0 1405 aa25.24■■□□□ 1.63
SMARCC2-203ENST00000394023 NCOA1Q15788 1441 aa25.24■■□□□ 1.63
SMARCC2-203ENST00000394023 DISP1Q96F81 1524 aa25.23■■□□□ 1.63
SMARCC2-203ENST00000394023 PBRM1Q86U86 1689 aa25.23■■□□□ 1.63
SMARCC2-203ENST00000394023 AKNAQ7Z591 1439 aa25.22■■□□□ 1.63
SMARCC2-203ENST00000394023 KIAA1107Q9UPP5 1409 aa25.21■■□□□ 1.63
SMARCC2-203ENST00000394023 CCDC144AA2RUR9 1427 aa25.21■■□□□ 1.63
SMARCC2-203ENST00000394023 SPAG9O60271 1321 aaKnown RBP25.21■■□□□ 1.63
SMARCC2-203ENST00000394023 PPP4R2Q9NY27 417 aa25.2■■□□□ 1.62
SMARCC2-203ENST00000394023 KIF3BO15066 747 aa25.2■■□□□ 1.62
SMARCC2-203ENST00000394023 GPATCH8Q9UKJ3 1502 aaKnown RBP25.19■■□□□ 1.62
SMARCC2-203ENST00000394023 KIAA0556O60303 1618 aa25.18■■□□□ 1.62
SMARCC2-203ENST00000394023 TCOF1Q13428 1488 aaKnown RBP25.18■■□□□ 1.62
SMARCC2-203ENST00000394023 KNSTRNQ9Y448 316 aa25.17■■□□□ 1.62
SMARCC2-203ENST00000394023 RAPGEF6Q8TEU7 1601 aa25.17■■□□□ 1.62
SMARCC2-203ENST00000394023 TMF1P82094 1093 aa25.17■■□□□ 1.62
SMARCC2-203ENST00000394023 AFAP1Q8N556 730 aa25.17■■□□□ 1.62
SMARCC2-203ENST00000394023 WDR43Q15061 677 aaKnown RBP eCLIP25.16■■□□□ 1.629e-6■■■□□ 15.6
SMARCC2-203ENST00000394023 EIF4G3O43432 1585 aaKnown RBP25.16■■□□□ 1.62
SMARCC2-203ENST00000394023 RBM19Q9Y4C8 960 aaKnown RBP25.15■■□□□ 1.62
SMARCC2-203ENST00000394023 NBPF1Q3BBV0 1214 aa25.15■■□□□ 1.62
SMARCC2-203ENST00000394023 GGT6Q6P531 493 aa25.13■■□□□ 1.61
SMARCC2-203ENST00000394023 RPRD2Q5VT52 1461 aaKnown RBP25.12■■□□□ 1.61
SMARCC2-203ENST00000394023 ARHGAP5Q13017 1502 aa25.1■■□□□ 1.61
SMARCC2-203ENST00000394023 ATP10BO94823 1461 aa25.1■■□□□ 1.61
SMARCC2-203ENST00000394023 NPM2Q86SE8 214 aaKnown RBP25.09■■□□□ 1.61
SMARCC2-203ENST00000394023 KTN1Q86UP2 1357 aaKnown RBP25.06■■□□□ 1.6
SMARCC2-203ENST00000394023 ZBED9Q6R2W3 1325 aa25.05■■□□□ 1.6
SMARCC2-203ENST00000394023 KDM6BO15054 1643 aa25.05■■□□□ 1.6
SMARCC2-203ENST00000394023 PANK3Q9H999 370 aa25.05■■□□□ 1.6
SMARCC2-203ENST00000394023 RALBP1Q15311 655 aa25.04■■□□□ 1.6
SMARCC2-203ENST00000394023 TNNT2P45379 298 aaPredicted RBP25.03■■□□□ 1.6
SMARCC2-203ENST00000394023 KANK1Q14678 1352 aa25.02■■□□□ 1.6
SMARCC2-203ENST00000394023 STAG3Q9UJ98 1225 aa25.02■■□□□ 1.6
SMARCC2-203ENST00000394023 NUDCQ9Y266 331 aa25■■□□□ 1.59
SMARCC2-203ENST00000394023 CDCA8Q53HL2 280 aa25■■□□□ 1.59
SMARCC2-203ENST00000394023 NLRP13Q86W25 1043 aa24.98■■□□□ 1.59
SMARCC2-203ENST00000394023 CANXP27824 592 aaKnown RBP24.98■■□□□ 1.59
SMARCC2-203ENST00000394023 MYBBP1AQ9BQG0 1328 aaKnown RBP24.97■■□□□ 1.59
SMARCC2-203ENST00000394023 KIF14Q15058 1648 aa24.96■■□□□ 1.59
SMARCC2-203ENST00000394023 NUTM2DQ5VT03 806 aaPredicted RBP24.96■■□□□ 1.59
SMARCC2-203ENST00000394023 CEP170Q5SW79 1584 aa24.96■■□□□ 1.59
SMARCC2-203ENST00000394023 NUP160Q12769 1436 aa24.93■■□□□ 1.58
SMARCC2-203ENST00000394023 SAFB2Q14151 953 aaKnown RBP eCLIP24.93■■□□□ 1.58
SMARCC2-203ENST00000394023 DAXXQ9UER7 740 aaPredicted RBP24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms