RNA–Protein interactions for RNA: ENST00000393794.4

POLR2J-202, Transcript of RNA polymerase II subunit J, humanhuman

TSL 1 (best) BASIC

Gene POLR2J, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J-202ENST00000393794 FER1L4A9Z1Z3 1794 aa33.26■■■□□ 2.92
POLR2J-202ENST00000393794 ATP10AO60312 1499 aa33.26■■■□□ 2.92
POLR2J-202ENST00000393794 MLECQ14165 292 aa33.21■■■□□ 2.91
POLR2J-202ENST00000393794 EFCAB2Q5VUJ9 269 aa33.2■■■□□ 2.91
POLR2J-202ENST00000393794 C9orf84Q5VXU9 1444 aa33.19■■■□□ 2.9
POLR2J-202ENST00000393794 CERKQ8TCT0 537 aa33.19■■■□□ 2.9
POLR2J-202ENST00000393794 PLPPR3Q6T4P5 718 aa33.18■■■□□ 2.9
POLR2J-202ENST00000393794 FMN1Q68DA7 1419 aa33.18■■■□□ 2.9
POLR2J-202ENST00000393794 MYO5CQ9NQX4 1742 aa33.17■■■□□ 2.9
POLR2J-202ENST00000393794 ARHGAP35Q9NRY4 1499 aa33.15■■■□□ 2.9
POLR2J-202ENST00000393794 KDM5CP41229 1560 aa33.13■■■□□ 2.89
POLR2J-202ENST00000393794 PREX1Q8TCU6 1659 aa33.11■■■□□ 2.89
POLR2J-202ENST00000393794 KIF14Q15058 1648 aa33.11■■■□□ 2.89
POLR2J-202ENST00000393794 CDK11AQ9UQ88 783 aaPredicted RBP33.1■■■□□ 2.89
POLR2J-202ENST00000393794 ZNF518AQ6AHZ1 1483 aa33.1■■■□□ 2.89
POLR2J-202ENST00000393794 TROQ12816 1431 aaPredicted RBP33.09■■■□□ 2.89
POLR2J-202ENST00000393794 SETD1BQ9UPS6 1966 aaKnown RBP33.08■■■□□ 2.89
POLR2J-202ENST00000393794 CEBPAP49715 358 aaPredicted RBP33.07■■■□□ 2.88
POLR2J-202ENST00000393794 AFAP1Q8N556 730 aa33.07■■■□□ 2.88
POLR2J-202ENST00000393794 REREQ9P2R6 1566 aa33.04■■■□□ 2.88
POLR2J-202ENST00000393794 STRCQ7RTU9 1775 aa33.04■■■□□ 2.88
POLR2J-202ENST00000393794 UBTFP17480 764 aaKnown RBP33.01■■■□□ 2.87
POLR2J-202ENST00000393794 DIP2CQ9Y2E4 1556 aa33■■■□□ 2.87
POLR2J-202ENST00000393794 LRRIQ1Q96JM4 1722 aa33■■■□□ 2.87
POLR2J-202ENST00000393794 ATP1B4Q9UN42 357 aaPredicted RBP33■■■□□ 2.87
POLR2J-202ENST00000393794 MLH3Q9UHC1 1453 aa32.99■■■□□ 2.87
POLR2J-202ENST00000393794 ARHGAP5Q13017 1502 aa32.99■■■□□ 2.87
POLR2J-202ENST00000393794 CDC42BPBQ9Y5S2 1711 aa32.97■■■□□ 2.87
POLR2J-202ENST00000393794 DMRT2Q9Y5R5 561 aa32.95■■■□□ 2.87
POLR2J-202ENST00000393794 CLIP1P30622 1438 aa32.94■■■□□ 2.86
POLR2J-202ENST00000393794 AGLP35573 1532 aa32.93■■■□□ 2.86
POLR2J-202ENST00000393794 UHRF1BP1Q6BDS2 1440 aa32.93■■■□□ 2.86
POLR2J-202ENST00000393794 ABCA6Q8N139 1617 aa32.92■■■□□ 2.86
POLR2J-202ENST00000393794 TRAPPC8Q9Y2L5 1435 aa32.89■■■□□ 2.86
POLR2J-202ENST00000393794 C3P01024 1663 aa32.87■■■□□ 2.85
POLR2J-202ENST00000393794 ABCC1P33527 1531 aa32.87■■■□□ 2.85
POLR2J-202ENST00000393794 PTPRTO14522 1441 aa32.86■■■□□ 2.85
POLR2J-202ENST00000393794 EHMT2Q96KQ7 1210 aa32.86■■■□□ 2.85
POLR2J-202ENST00000393794 PREX2Q70Z35 1606 aa32.86■■■□□ 2.85
POLR2J-202ENST00000393794 CASKIN1Q8WXD9 1431 aa32.81■■■□□ 2.84
POLR2J-202ENST00000393794 ITSN2Q9NZM3 1697 aa32.81■■■□□ 2.84
POLR2J-202ENST00000393794 KIDINS220Q9ULH0 1771 aa32.81■■■□□ 2.84
POLR2J-202ENST00000393794 MYT1LQ9UL68 1186 aa32.77■■■□□ 2.84
POLR2J-202ENST00000393794 CCDC18Q5T9S5 1454 aa32.77■■■□□ 2.84
POLR2J-202ENST00000393794 CHIC1Q5VXU3 224 aa32.75■■■□□ 2.83
POLR2J-202ENST00000393794 CDC42BPAQ5VT25 1732 aa32.74■■■□□ 2.83
POLR2J-202ENST00000393794 LTBP4Q8N2S1 1624 aa32.74■■■□□ 2.83
POLR2J-202ENST00000393794 CNTLNQ9NXG0 1405 aa32.74■■■□□ 2.83
POLR2J-202ENST00000393794 NCOA1Q15788 1441 aa32.7■■■□□ 2.83
POLR2J-202ENST00000393794 ILDR2Q71H61 639 aa32.69■■■□□ 2.82
POLR2J-202ENST00000393794 SAMD9LQ8IVG5 1584 aa32.68■■■□□ 2.82
POLR2J-202ENST00000393794 NPATQ14207 1427 aa32.66■■■□□ 2.82
POLR2J-202ENST00000393794 IQSEC2Q5JU85 1478 aa32.66■■■□□ 2.82
POLR2J-202ENST00000393794 ESF1Q9H501 851 aaKnown RBP32.65■■■□□ 2.82
POLR2J-202ENST00000393794 MROH2AA6NES4 1674 aa32.65■■■□□ 2.82
POLR2J-202ENST00000393794 DISP3Q9P2K9 1392 aa32.63■■■□□ 2.81
POLR2J-202ENST00000393794 GPATCH8Q9UKJ3 1502 aaKnown RBP32.62■■■□□ 2.81
POLR2J-202ENST00000393794 FYCO1Q9BQS8 1478 aa32.61■■■□□ 2.81
POLR2J-202ENST00000393794 ZMYM3Q14202 1370 aa32.6■■■□□ 2.81
POLR2J-202ENST00000393794 KIAA1107Q9UPP5 1409 aa32.57■■■□□ 2.8
POLR2J-202ENST00000393794 SYCP2Q9BX26 1530 aa32.56■■■□□ 2.8
POLR2J-202ENST00000393794 SOCS7O14512 581 aa32.56■■■□□ 2.8
POLR2J-202ENST00000393794 CAMSAP1Q5T5Y3 1602 aa32.55■■■□□ 2.8
POLR2J-202ENST00000393794 SPAG9O60271 1321 aaKnown RBP32.54■■■□□ 2.8
POLR2J-202ENST00000393794 PLXNC1O60486 1568 aa32.54■■■□□ 2.8
POLR2J-202ENST00000393794 HNRNPMP52272 730 aaKnown RBP eCLIP32.53■■■□□ 2.8
POLR2J-202ENST00000393794 ZNF777Q9ULD5 760 aaPredicted RBP32.5■■■□□ 2.79
POLR2J-202ENST00000393794 ATP7AQ04656 1500 aa32.5■■■□□ 2.79
POLR2J-202ENST00000393794 INO80Q9ULG1 1556 aaPredicted RBP32.49■■■□□ 2.79
POLR2J-202ENST00000393794 SUPT6HQ7KZ85 1726 aaKnown RBP32.49■■■□□ 2.79
POLR2J-202ENST00000393794 PLEKHH2Q8IVE3 1493 aa32.47■■■□□ 2.79
POLR2J-202ENST00000393794 PTPRKQ15262 1439 aa32.46■■■□□ 2.79
POLR2J-202ENST00000393794 A2MP01023 1474 aa32.46■■■□□ 2.79
POLR2J-202ENST00000393794 PLA2R1Q13018 1463 aa32.46■■■□□ 2.79
POLR2J-202ENST00000393794 ZNF142P52746 1687 aaPredicted RBP32.46■■■□□ 2.79
POLR2J-202ENST00000393794 SPATA31D1Q6ZQQ2 1576 aa32.45■■■□□ 2.79
POLR2J-202ENST00000393794 CLTCQ00610 1675 aaKnown RBP32.44■■■□□ 2.78
POLR2J-202ENST00000393794 NCKAP5LQ9HCH0 1330 aa32.44■■■□□ 2.78
POLR2J-202ENST00000393794 TCOF1Q13428 1488 aaKnown RBP32.43■■■□□ 2.78
POLR2J-202ENST00000393794 CFDP1Q9UEE9 299 aaPredicted RBP32.42■■■□□ 2.78
POLR2J-202ENST00000393794 MYO3AQ8NEV4 1616 aa32.41■■■□□ 2.78
POLR2J-202ENST00000393794 PPP6R1Q9UPN7 881 aa32.41■■■□□ 2.78
POLR2J-202ENST00000393794 PKD2Q13563 968 aa32.4■■■□□ 2.78
POLR2J-202ENST00000393794 ZNF335Q9H4Z2 1342 aaPredicted RBP32.39■■■□□ 2.78
POLR2J-202ENST00000393794 CEP170BQ9Y4F5 1589 aaPredicted RBP32.37■■■□□ 2.77
POLR2J-202ENST00000393794 CCNB3Q8WWL7 1395 aa32.36■■■□□ 2.77
POLR2J-202ENST00000393794 MBD5Q9P267 1494 aa32.35■■■□□ 2.77
POLR2J-202ENST00000393794 GGT6Q6P531 493 aa32.33■■■□□ 2.77
POLR2J-202ENST00000393794 ADGBQ8N7X0 1667 aa32.32■■■□□ 2.76
POLR2J-202ENST00000393794 ZNF644Q9H582 1327 aaPredicted RBP32.28■■■□□ 2.76
POLR2J-202ENST00000393794 RTEL1-TNFRSF6BF6WH68 1400 aa32.28■■■□□ 2.76
POLR2J-202ENST00000393794 MTUS2Q5JR59 1369 aa32.26■■■□□ 2.75
POLR2J-202ENST00000393794 TIAM1Q13009 1591 aa32.26■■■□□ 2.75
POLR2J-202ENST00000393794 A2ML1A8K2U0 1454 aa32.25■■■□□ 2.75
POLR2J-202ENST00000393794 UBAP1LF5GYI3 381 aa32.25■■■□□ 2.75
POLR2J-202ENST00000393794 DNMT1P26358 1616 aaKnown RBP32.24■■■□□ 2.75
POLR2J-202ENST00000393794 DHX29Q7Z478 1369 aaKnown RBP32.23■■■□□ 2.75
POLR2J-202ENST00000393794 CEP162Q5TB80 1403 aa32.18■■■□□ 2.74
POLR2J-202ENST00000393794 EHBP1L1Q8N3D4 1523 aa32.16■■■□□ 2.74
POLR2J-202ENST00000393794 NEURL4Q96JN8 1562 aa32.15■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms