RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 B4GALNT3Q6L9W6 998 aa15.16■□□□□ 0.02
LAMB1-203ENST00000393560 CNKSR2Q8WXI2 1034 aa15.16■□□□□ 0.02
LAMB1-203ENST00000393560 PPP4R2Q9NY27 417 aa15.16■□□□□ 0.02
LAMB1-203ENST00000393560 PRXQ9BXM0 1461 aa15.16■□□□□ 0.02
LAMB1-203ENST00000393560 RAD54L2Q9Y4B4 1467 aa15.16■□□□□ 0.02
LAMB1-203ENST00000393560 BCCIPQ9P287 314 aaKnown RBP eCLIP15.16■□□□□ 0.02
LAMB1-203ENST00000393560 CHRM1P11229 460 aaPredicted RBP15.15■□□□□ 0.02
LAMB1-203ENST00000393560 CNPY4Q8N129 248 aa15.14■□□□□ 0.01
LAMB1-203ENST00000393560 IGF1RP08069 1367 aa15.13■□□□□ 0.01
LAMB1-203ENST00000393560 TMEM51Q9NW97 253 aa15.12■□□□□ 0.01
LAMB1-203ENST00000393560 TOPBP1Q92547 1522 aa15.12■□□□□ 0.01
LAMB1-203ENST00000393560 KCNG1Q9UIX4 513 aa15.1■□□□□ 0.01
LAMB1-203ENST00000393560 LAMC3Q9Y6N6 1575 aa15.09■□□□□ 0.01
LAMB1-203ENST00000393560 POLA1P09884 1462 aaPredicted RBP15.09■□□□□ 0.01
LAMB1-203ENST00000393560 DNMBPQ6XZF7 1577 aa15.08■□□□□ 0
LAMB1-203ENST00000393560 DDRGK1Q96HY6 314 aa15.08■□□□□ 0
LAMB1-203ENST00000393560 URB2Q14146 1524 aaKnown RBP15.07■□□□□ 0
LAMB1-203ENST00000393560 PDS5BQ9NTI5 1447 aa15.07■□□□□ 0
LAMB1-203ENST00000393560 RNF216Q9NWF9 866 aaPredicted RBP15.07■□□□□ 0
LAMB1-203ENST00000393560 ERICH3Q5RHP9 1530 aa15.07■□□□□ 0
LAMB1-203ENST00000393560 CARMIL1Q5VZK9 1371 aa15.07■□□□□ 0
LAMB1-203ENST00000393560 NCLP19338 710 aaKnown RBP15.07■□□□□ 0
LAMB1-203ENST00000393560 NFKBIBQ15653 356 aa15.06■□□□□ 0
LAMB1-203ENST00000393560 HIRIP3Q9BW71 556 aaPredicted RBP15.04■□□□□ -0
LAMB1-203ENST00000393560 VPS8Q8N3P4 1428 aa15.04■□□□□ -0
LAMB1-203ENST00000393560 CDK11BP21127 795 aaKnown RBP15.04■□□□□ -0
LAMB1-203ENST00000393560 WWC1Q8IX03 1113 aa15.04■□□□□ -0
LAMB1-203ENST00000393560 PRDM10Q9NQV6 1147 aa15.04■□□□□ -0
LAMB1-203ENST00000393560 TDRD9Q8NDG6 1382 aaKnown RBP15.04■□□□□ -0
LAMB1-203ENST00000393560 TPRNQ4KMQ1 711 aa15.03■□□□□ -0
LAMB1-203ENST00000393560 HSP90B1P14625 803 aaKnown RBP15.02■□□□□ -0
LAMB1-203ENST00000393560 CLCN1P35523 988 aa15.01□□□□□ -0.01
LAMB1-203ENST00000393560 KIF21AQ7Z4S6 1674 aa15.01□□□□□ -0.01
LAMB1-203ENST00000393560 P3H3Q8IVL6 736 aa15□□□□□ -0.01
LAMB1-203ENST00000393560 MAPK8IP2Q13387 824 aaPredicted RBP14.98□□□□□ -0.01
LAMB1-203ENST00000393560 KANK4Q5T7N3 995 aaPredicted RBP14.98□□□□□ -0.01
LAMB1-203ENST00000393560 ARAP1Q96P48 1450 aa14.98□□□□□ -0.01
LAMB1-203ENST00000393560 ABCA10Q8WWZ4 1543 aa14.98□□□□□ -0.01
LAMB1-203ENST00000393560 SMAP1Q8IYB5 467 aaPredicted RBP14.98□□□□□ -0.01
LAMB1-203ENST00000393560 RGS22Q8NE09 1264 aa14.98□□□□□ -0.01
LAMB1-203ENST00000393560 PPP4R3BQ5MIZ7 849 aa14.97□□□□□ -0.01
LAMB1-203ENST00000393560 ANP32BQ92688 251 aaKnown RBP14.96□□□□□ -0.01
LAMB1-203ENST00000393560 POLR3GLQ9BT43 218 aa14.95□□□□□ -0.02
LAMB1-203ENST00000393560 E9PSI1 815 aa14.93□□□□□ -0.02
LAMB1-203ENST00000393560 ARHGAP35Q9NRY4 1499 aa14.93□□□□□ -0.02
LAMB1-203ENST00000393560 TPM2P07951 284 aa14.93□□□□□ -0.02
LAMB1-203ENST00000393560 IRX3P78415 501 aaPredicted RBP14.93□□□□□ -0.02
LAMB1-203ENST00000393560 ATP1B4Q9UN42 357 aaPredicted RBP14.92□□□□□ -0.02
LAMB1-203ENST00000393560 ARID3AQ99856 593 aa14.9□□□□□ -0.02
LAMB1-203ENST00000393560 TMED8Q6PL24 325 aaPredicted RBP14.88□□□□□ -0.03
LAMB1-203ENST00000393560 GAPVD1Q14C86 1478 aa14.88□□□□□ -0.03
LAMB1-203ENST00000393560 KCNA4P22459 653 aa14.87□□□□□ -0.03
LAMB1-203ENST00000393560 FBXO3Q9UK99 471 aa14.87□□□□□ -0.03
LAMB1-203ENST00000393560 DDX10Q13206 875 aaKnown RBP14.86□□□□□ -0.03
LAMB1-203ENST00000393560 AQRO60306 1485 aaKnown RBP eCLIP14.86□□□□□ -0.031e-10■■■■■ 44
LAMB1-203ENST00000393560 PATL2C9JE40 543 aaKnown RBP14.86□□□□□ -0.03
LAMB1-203ENST00000393560 DMTNQ08495 405 aa14.85□□□□□ -0.03
LAMB1-203ENST00000393560 CERS3Q8IU89 383 aa14.85□□□□□ -0.03
LAMB1-203ENST00000393560 DNTTIP2Q5QJE6 756 aaKnown RBP14.85□□□□□ -0.03
LAMB1-203ENST00000393560 MRC2Q9UBG0 1479 aa14.84□□□□□ -0.03
LAMB1-203ENST00000393560 FRAT2O75474 233 aaPredicted RBP14.84□□□□□ -0.03
LAMB1-203ENST00000393560 UTP14CQ5TAP6 766 aaKnown RBP14.84□□□□□ -0.03
LAMB1-203ENST00000393560 ZBTB22O15209 634 aa14.84□□□□□ -0.03
LAMB1-203ENST00000393560 SLC52A1Q9NWF4 448 aa14.84□□□□□ -0.03
LAMB1-203ENST00000393560 ERCC6Q03468 1493 aa14.84□□□□□ -0.03
LAMB1-203ENST00000393560 HNRNPUQ00839 825 aaKnown RBP eCLIP14.84□□□□□ -0.03
LAMB1-203ENST00000393560 DHX57Q6P158 1386 aaKnown RBP14.83□□□□□ -0.04
LAMB1-203ENST00000393560 WDR97A6NE52 1622 aa14.82□□□□□ -0.04
LAMB1-203ENST00000393560 MYCNP04198 464 aaPredicted RBP14.82□□□□□ -0.04
LAMB1-203ENST00000393560 TNNT2P45379 298 aaPredicted RBP14.82□□□□□ -0.04
LAMB1-203ENST00000393560 SIN3AQ96ST3 1273 aa14.82□□□□□ -0.04
LAMB1-203ENST00000393560 HDAC5Q9UQL6 1122 aa14.82□□□□□ -0.04
LAMB1-203ENST00000393560 FAM193AP78312 1265 aa14.81□□□□□ -0.04
LAMB1-203ENST00000393560 FAM13BQ9NYF5 915 aa14.81□□□□□ -0.04
LAMB1-203ENST00000393560 FHOD3Q2V2M9 1422 aa14.81□□□□□ -0.04
LAMB1-203ENST00000393560 ABCA5Q8WWZ7 1642 aa14.81□□□□□ -0.04
LAMB1-203ENST00000393560 TARBP1Q13395 1621 aaKnown RBP14.8□□□□□ -0.04
LAMB1-203ENST00000393560 L1TD1Q5T7N2 865 aaKnown RBP14.8□□□□□ -0.04
LAMB1-203ENST00000393560 CFAP44Q96MT7 982 aa14.79□□□□□ -0.04
LAMB1-203ENST00000393560 SLC4A3P48751 1232 aa14.79□□□□□ -0.04
LAMB1-203ENST00000393560 CUL7Q14999 1698 aa14.79□□□□□ -0.04
LAMB1-203ENST00000393560 CCER2I3L3R5 266 aa14.78□□□□□ -0.04
LAMB1-203ENST00000393560 APPP05067 770 aa14.78□□□□□ -0.04
LAMB1-203ENST00000393560 AEBP1Q8IUX7 1158 aa14.78□□□□□ -0.04
LAMB1-203ENST00000393560 MAP7D2Q96T17 732 aa14.78□□□□□ -0.04
LAMB1-203ENST00000393560 ZNF608Q9ULD9 1512 aaPredicted RBP14.78□□□□□ -0.04
LAMB1-203ENST00000393560 KIAA1211Q6ZU35 1233 aa14.77□□□□□ -0.05
LAMB1-203ENST00000393560 POGKQ9P215 609 aa14.76□□□□□ -0.05
LAMB1-203ENST00000393560 FAM43BQ6ZT52 329 aaPredicted RBP14.75□□□□□ -0.05
LAMB1-203ENST00000393560 VGFO15240 615 aaPredicted RBP14.75□□□□□ -0.05
LAMB1-203ENST00000393560 ZSCAN20P17040 1043 aaPredicted RBP14.74□□□□□ -0.05
LAMB1-203ENST00000393560 CLGNO14967 610 aa14.74□□□□□ -0.05
LAMB1-203ENST00000393560 SOX12O15370 315 aa14.74□□□□□ -0.05
LAMB1-203ENST00000393560 CCDC9Q9Y3X0 531 aaKnown RBP14.74□□□□□ -0.05
LAMB1-203ENST00000393560 NGEFQ8N5V2 710 aa14.73□□□□□ -0.05
LAMB1-203ENST00000393560 RIPK4P57078 832 aa14.73□□□□□ -0.05
LAMB1-203ENST00000393560 ANP32CO43423 234 aa14.72□□□□□ -0.05
LAMB1-203ENST00000393560 FAM50AQ14320 339 aaKnown RBP14.72□□□□□ -0.05
LAMB1-203ENST00000393560 CHMP4CQ96CF2 233 aa14.72□□□□□ -0.05
LAMB1-203ENST00000393560 ESPNB1AK53 854 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms