RNA–Protein interactions for RNA: ENST00000393324.7

ME3-202, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-202ENST00000393324 ABCC5O15440 1437 aa29.65■■■□□ 2.34
ME3-202ENST00000393324 ZNF777Q9ULD5 760 aaPredicted RBP29.61■■■□□ 2.33
ME3-202ENST00000393324 ROCK1Q13464 1354 aa29.58■■■□□ 2.33
ME3-202ENST00000393324 ZNF316A6NFI3 1004 aaPredicted RBP29.58■■■□□ 2.33
ME3-202ENST00000393324 UHRF1BP1LA0JNW5 1464 aa29.56■■■□□ 2.32
ME3-202ENST00000393324 KDM6BO15054 1643 aa29.52■■■□□ 2.32
ME3-202ENST00000393324 SIN3AQ96ST3 1273 aa29.52■■■□□ 2.32
ME3-202ENST00000393324 OSCARQ8IYS5 282 aa29.51■■■□□ 2.31
ME3-202ENST00000393324 ZCCHC11Q5TAX3 1644 aaKnown RBP29.5■■■□□ 2.31
ME3-202ENST00000393324 KDM5BQ9UGL1 1544 aa29.48■■■□□ 2.31
ME3-202ENST00000393324 NEUROD1Q13562 356 aa29.48■■■□□ 2.31
ME3-202ENST00000393324 CROCC2H7BZ55 1655 aa29.47■■■□□ 2.31
ME3-202ENST00000393324 PREX2Q70Z35 1606 aa29.45■■■□□ 2.31
ME3-202ENST00000393324 CDC42BPBQ9Y5S2 1711 aa29.45■■■□□ 2.31
ME3-202ENST00000393324 ADGBQ8N7X0 1667 aa29.45■■■□□ 2.3
ME3-202ENST00000393324 TRIM52Q96A61 297 aa29.44■■■□□ 2.3
ME3-202ENST00000393324 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.44■■■□□ 2.3
ME3-202ENST00000393324 TTC37Q6PGP7 1564 aa29.43■■■□□ 2.3
ME3-202ENST00000393324 DIEXFQ68CQ4 756 aaKnown RBP29.42■■■□□ 2.3
ME3-202ENST00000393324 NCOA1Q15788 1441 aa29.41■■■□□ 2.3
ME3-202ENST00000393324 ADGRL2O95490 1459 aa29.4■■■□□ 2.3
ME3-202ENST00000393324 KCNH8Q96L42 1107 aa29.4■■■□□ 2.3
ME3-202ENST00000393324 ACIN1Q9UKV3 1341 aaKnown RBP29.39■■■□□ 2.3
ME3-202ENST00000393324 TIMELESSQ9UNS1 1208 aa29.39■■■□□ 2.29
ME3-202ENST00000393324 SAMD9LQ8IVG5 1584 aa29.36■■■□□ 2.29
ME3-202ENST00000393324 ANKRD30AQ9BXX3 1397 aa29.36■■■□□ 2.29
ME3-202ENST00000393324 SHANK2Q9UPX8 1470 aa29.35■■■□□ 2.29
ME3-202ENST00000393324 MYO5CQ9NQX4 1742 aa29.35■■■□□ 2.29
ME3-202ENST00000393324 HNRNPMP52272 730 aaKnown RBP eCLIP29.35■■■□□ 2.29
ME3-202ENST00000393324 ARHGEF5Q12774 1597 aa29.34■■■□□ 2.29
ME3-202ENST00000393324 ARHGAP5Q13017 1502 aa29.33■■■□□ 2.29
ME3-202ENST00000393324 MBD5Q9P267 1494 aa29.33■■■□□ 2.29
ME3-202ENST00000393324 DENND4BO75064 1496 aaPredicted RBP29.32■■■□□ 2.28
ME3-202ENST00000393324 C9orf84Q5VXU9 1444 aa29.32■■■□□ 2.28
ME3-202ENST00000393324 MPHOSPH9Q99550 1183 aa29.32■■■□□ 2.28
ME3-202ENST00000393324 TSPY4P0CV99 314 aa29.32■■■□□ 2.28
ME3-202ENST00000393324 TSPY10P0CW01 314 aa29.32■■■□□ 2.28
ME3-202ENST00000393324 PELP1Q8IZL8 1130 aaKnown RBP29.29■■■□□ 2.28
ME3-202ENST00000393324 RSPH4AQ5TD94 716 aa29.26■■■□□ 2.28
ME3-202ENST00000393324 CCDC141Q6ZP82 1450 aa29.26■■■□□ 2.28
ME3-202ENST00000393324 TONSLQ96HA7 1378 aa29.24■■■□□ 2.27
ME3-202ENST00000393324 PLCH2O75038 1416 aa29.24■■■□□ 2.27
ME3-202ENST00000393324 SYCP2Q9BX26 1530 aa29.23■■■□□ 2.27
ME3-202ENST00000393324 ANKRD50Q9ULJ7 1429 aa29.23■■■□□ 2.27
ME3-202ENST00000393324 WDR7Q9Y4E6 1490 aa29.21■■■□□ 2.27
ME3-202ENST00000393324 PPP1R15AO75807 674 aaPredicted RBP29.21■■■□□ 2.27
ME3-202ENST00000393324 PLEKHH2Q8IVE3 1493 aa29.2■■■□□ 2.26
ME3-202ENST00000393324 KIAA1107Q9UPP5 1409 aa29.19■■■□□ 2.26
ME3-202ENST00000393324 SLC4A1APQ9BWU0 796 aaKnown RBP29.18■■■□□ 2.26
ME3-202ENST00000393324 FOXD1Q16676 465 aa29.17■■■□□ 2.26
ME3-202ENST00000393324 EFCAB2Q5VUJ9 269 aa29.17■■■□□ 2.26
ME3-202ENST00000393324 KIF15Q9NS87 1388 aa29.16■■■□□ 2.26
ME3-202ENST00000393324 PZPP20742 1482 aa29.15■■■□□ 2.26
ME3-202ENST00000393324 MAST1Q9Y2H9 1570 aa29.11■■■□□ 2.25
ME3-202ENST00000393324 ASXL2Q76L83 1435 aa29.11■■■□□ 2.25
ME3-202ENST00000393324 ARHGEF12Q9NZN5 1544 aa29.1■■■□□ 2.25
ME3-202ENST00000393324 ANKRD30BQ9BXX2 1392 aa29.1■■■□□ 2.25
ME3-202ENST00000393324 ARAP3Q8WWN8 1544 aa29.1■■■□□ 2.25
ME3-202ENST00000393324 NPM1P06748 294 aaKnown RBP eCLIP29.09■■■□□ 2.25
ME3-202ENST00000393324 ABCC1P33527 1531 aa29.07■■■□□ 2.24
ME3-202ENST00000393324 ABCA9Q8IUA7 1624 aa29.06■■■□□ 2.24
ME3-202ENST00000393324 NUP155O75694 1391 aa29.03■■■□□ 2.24
ME3-202ENST00000393324 PLXNC1O60486 1568 aa29.01■■■□□ 2.23
ME3-202ENST00000393324 SCAF1Q9H7N4 1312 aaKnown RBP29■■■□□ 2.23
ME3-202ENST00000393324 RPRD2Q5VT52 1461 aaKnown RBP29■■■□□ 2.23
ME3-202ENST00000393324 KDM5DQ9BY66 1539 aa28.99■■■□□ 2.23
ME3-202ENST00000393324 PKD2Q13563 968 aa28.99■■■□□ 2.23
ME3-202ENST00000393324 TRAPPC8Q9Y2L5 1435 aa28.98■■■□□ 2.23
ME3-202ENST00000393324 FANCAO15360 1455 aa28.97■■■□□ 2.23
ME3-202ENST00000393324 L3MBTL2Q969R5 705 aa28.93■■■□□ 2.22
ME3-202ENST00000393324 DUOX2Q9NRD8 1548 aa28.91■■■□□ 2.22
ME3-202ENST00000393324 MIER1Q8N108 512 aa28.9■■■□□ 2.22
ME3-202ENST00000393324 AFAP1Q8N556 730 aa28.9■■■□□ 2.22
ME3-202ENST00000393324 SPAG9O60271 1321 aaKnown RBP28.88■■■□□ 2.21
ME3-202ENST00000393324 TEX14Q8IWB6 1497 aa28.86■■■□□ 2.21
ME3-202ENST00000393324 UNC13BO14795 1591 aa28.86■■■□□ 2.21
ME3-202ENST00000393324 FAM135AQ9P2D6 1515 aa28.86■■■□□ 2.21
ME3-202ENST00000393324 RTEL1-TNFRSF6BF6WH68 1400 aa28.86■■■□□ 2.21
ME3-202ENST00000393324 ADGRL1O94910 1474 aa28.85■■■□□ 2.21
ME3-202ENST00000393324 ERBINQ96RT1 1412 aa28.85■■■□□ 2.21
ME3-202ENST00000393324 ZFYVE16Q7Z3T8 1539 aa28.83■■■□□ 2.21
ME3-202ENST00000393324 SCAPERQ9BY12 1400 aa28.82■■■□□ 2.2
ME3-202ENST00000393324 HIRIP3Q9BW71 556 aaPredicted RBP28.82■■■□□ 2.2
ME3-202ENST00000393324 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.81■■■□□ 2.2
ME3-202ENST00000393324 CYB5RLQ6IPT4 315 aa28.8■■■□□ 2.2
ME3-202ENST00000393324 CD109Q6YHK3 1445 aa28.8■■■□□ 2.2
ME3-202ENST00000393324 RIMBP3CA6NJZ7 1639 aa28.78■■■□□ 2.2
ME3-202ENST00000393324 RIMBP3BA6NNM3 1639 aa28.78■■■□□ 2.2
ME3-202ENST00000393324 RIMBP3Q9UFD9 1639 aa28.78■■■□□ 2.2
ME3-202ENST00000393324 IQGAP3Q86VI3 1631 aa28.76■■■□□ 2.19
ME3-202ENST00000393324 INO80Q9ULG1 1556 aaPredicted RBP28.76■■■□□ 2.19
ME3-202ENST00000393324 ATP7AQ04656 1500 aa28.76■■■□□ 2.19
ME3-202ENST00000393324 MAGI2Q86UL8 1455 aa28.74■■■□□ 2.19
ME3-202ENST00000393324 NBPF8Q3BBV2 869 aa28.72■■■□□ 2.19
ME3-202ENST00000393324 CFAP74Q9C0B2 1584 aa28.72■■■□□ 2.19
ME3-202ENST00000393324 MYT1LQ9UL68 1186 aa28.7■■■□□ 2.19
ME3-202ENST00000393324 DDX10Q13206 875 aaKnown RBP28.67■■■□□ 2.18
ME3-202ENST00000393324 ZNF518AQ6AHZ1 1483 aa28.67■■■□□ 2.18
ME3-202ENST00000393324 HSPA5P11021 654 aaKnown RBP28.64■■■□□ 2.18
ME3-202ENST00000393324 EIF4G2P78344 907 aaKnown RBP eCLIP28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms