RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 PRDM2Q13029 1718 aa10.94□□□□□ -0.66
ATXN3-203ENST00000393287 AEBP2Q6ZN18 517 aaPredicted RBP10.94□□□□□ -0.66
ATXN3-203ENST00000393287 CD109Q6YHK3 1445 aa10.94□□□□□ -0.66
ATXN3-203ENST00000393287 DNAJC5Q9H3Z4 198 aa10.94□□□□□ -0.66
ATXN3-203ENST00000393287 EIF3AQ14152 1382 aaKnown RBP10.93□□□□□ -0.66
ATXN3-203ENST00000393287 EHBP1L1Q8N3D4 1523 aa10.93□□□□□ -0.66
ATXN3-203ENST00000393287 AFAP1Q8N556 730 aa10.93□□□□□ -0.66
ATXN3-203ENST00000393287 PKD2Q13563 968 aa10.92□□□□□ -0.66
ATXN3-203ENST00000393287 THOC2Q8NI27 1593 aaKnown RBP10.91□□□□□ -0.66
ATXN3-203ENST00000393287 CFAP53Q96M91 514 aa10.91□□□□□ -0.66
ATXN3-203ENST00000393287 WDR43Q15061 677 aaKnown RBP eCLIP10.91□□□□□ -0.66
ATXN3-203ENST00000393287 POGKQ9P215 609 aa10.91□□□□□ -0.66
ATXN3-203ENST00000393287 EID1Q9Y6B2 187 aa10.91□□□□□ -0.66
ATXN3-203ENST00000393287 NCOA2Q15596 1464 aa10.91□□□□□ -0.66
ATXN3-203ENST00000393287 EPRSP07814 1512 aaKnown RBP10.91□□□□□ -0.66
ATXN3-203ENST00000393287 POGZQ7Z3K3 1410 aa10.9□□□□□ -0.66
ATXN3-203ENST00000393287 LRRC9Q6ZRR7 1453 aa10.9□□□□□ -0.66
ATXN3-203ENST00000393287 FGD6Q6ZV73 1430 aa10.9□□□□□ -0.66
ATXN3-203ENST00000393287 SCAPERQ9BY12 1400 aa10.9□□□□□ -0.66
ATXN3-203ENST00000393287 ARHGAP5Q13017 1502 aa10.9□□□□□ -0.67
ATXN3-203ENST00000393287 MIA2Q96PC5 1412 aa10.89□□□□□ -0.67
ATXN3-203ENST00000393287 CARD11Q9BXL7 1154 aa10.89□□□□□ -0.67
ATXN3-203ENST00000393287 PHLDB1Q86UU1 1377 aa10.89□□□□□ -0.67
ATXN3-203ENST00000393287 ZNF644Q9H582 1327 aaPredicted RBP10.88□□□□□ -0.67
ATXN3-203ENST00000393287 PNNQ9H307 717 aaKnown RBP10.88□□□□□ -0.67
ATXN3-203ENST00000393287 UGGT2Q9NYU1 1516 aa10.88□□□□□ -0.67
ATXN3-203ENST00000393287 RAPGEF3O95398 923 aa10.87□□□□□ -0.67
ATXN3-203ENST00000393287 TARBP1Q13395 1621 aaKnown RBP10.87□□□□□ -0.67
ATXN3-203ENST00000393287 KIF15Q9NS87 1388 aa10.86□□□□□ -0.67
ATXN3-203ENST00000393287 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.86□□□□□ -0.67
ATXN3-203ENST00000393287 STAC3Q96MF2 364 aa10.86□□□□□ -0.67
ATXN3-203ENST00000393287 ABCA5Q8WWZ7 1642 aa10.86□□□□□ -0.67
ATXN3-203ENST00000393287 HAP1P54257 671 aaPredicted RBP10.86□□□□□ -0.67
ATXN3-203ENST00000393287 TMF1P82094 1093 aa10.86□□□□□ -0.67
ATXN3-203ENST00000393287 MPHOSPH9Q99550 1183 aa10.85□□□□□ -0.67
ATXN3-203ENST00000393287 TEX14Q8IWB6 1497 aa10.85□□□□□ -0.67
ATXN3-203ENST00000393287 ASXL2Q76L83 1435 aa10.85□□□□□ -0.67
ATXN3-203ENST00000393287 KNSTRNQ9Y448 316 aa10.85□□□□□ -0.67
ATXN3-203ENST00000393287 TMC1Q8TDI8 760 aa10.84□□□□□ -0.67
ATXN3-203ENST00000393287 ABCC2Q92887 1545 aa10.83□□□□□ -0.68
ATXN3-203ENST00000393287 SCAF1Q9H7N4 1312 aaKnown RBP10.82□□□□□ -0.68
ATXN3-203ENST00000393287 MYT1Q01538 1121 aa10.82□□□□□ -0.68
ATXN3-203ENST00000393287 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.82□□□□□ -0.68
ATXN3-203ENST00000393287 DENND4BO75064 1496 aaPredicted RBP10.81□□□□□ -0.68
ATXN3-203ENST00000393287 NUDCQ9Y266 331 aa10.81□□□□□ -0.68
ATXN3-203ENST00000393287 ANKRD50Q9ULJ7 1429 aa10.81□□□□□ -0.68
ATXN3-203ENST00000393287 DCAF11Q8TEB1 546 aa10.81□□□□□ -0.68
ATXN3-203ENST00000393287 SENP3Q9H4L4 574 aaPredicted RBP10.81□□□□□ -0.68
ATXN3-203ENST00000393287 CDK13Q14004 1512 aaKnown RBP10.8□□□□□ -0.68
ATXN3-203ENST00000393287 CEP170Q5SW79 1584 aa10.8□□□□□ -0.68
ATXN3-203ENST00000393287 RAB3GAP2Q9H2M9 1393 aa10.8□□□□□ -0.68
ATXN3-203ENST00000393287 WDR7Q9Y4E6 1490 aa10.8□□□□□ -0.68
ATXN3-203ENST00000393287 ATP10BO94823 1461 aa10.8□□□□□ -0.68
ATXN3-203ENST00000393287 ADGRL1O94910 1474 aa10.8□□□□□ -0.68
ATXN3-203ENST00000393287 SUPT6HQ7KZ85 1726 aaKnown RBP10.79□□□□□ -0.68
ATXN3-203ENST00000393287 VGFO15240 615 aaPredicted RBP10.79□□□□□ -0.68
ATXN3-203ENST00000393287 NPM2Q86SE8 214 aaKnown RBP10.78□□□□□ -0.68
ATXN3-203ENST00000393287 HDGFL2Q7Z4V5 671 aaPredicted RBP10.78□□□□□ -0.68
ATXN3-203ENST00000393287 PPP6R1Q9UPN7 881 aa10.78□□□□□ -0.68
ATXN3-203ENST00000393287 CCDC144AA2RUR9 1427 aa10.78□□□□□ -0.68
ATXN3-203ENST00000393287 AKNAQ7Z591 1439 aa10.78□□□□□ -0.68
ATXN3-203ENST00000393287 ARHGEF11O15085 1522 aa10.77□□□□□ -0.69
ATXN3-203ENST00000393287 KIAA0556O60303 1618 aa10.77□□□□□ -0.69
ATXN3-203ENST00000393287 MAP3K1Q13233 1512 aa10.77□□□□□ -0.69
ATXN3-203ENST00000393287 KIF14Q15058 1648 aa10.77□□□□□ -0.69
ATXN3-203ENST00000393287 NUP153P49790 1475 aaKnown RBP10.76□□□□□ -0.69
ATXN3-203ENST00000393287 DISP1Q96F81 1524 aa10.76□□□□□ -0.69
ATXN3-203ENST00000393287 PLCH2O75038 1416 aa10.76□□□□□ -0.69
ATXN3-203ENST00000393287 FANCAO15360 1455 aa10.76□□□□□ -0.69
ATXN3-203ENST00000393287 C9orf84Q5VXU9 1444 aa10.76□□□□□ -0.69
ATXN3-203ENST00000393287 DDX10Q13206 875 aaKnown RBP10.76□□□□□ -0.69
ATXN3-203ENST00000393287 SIN3AQ96ST3 1273 aa10.75□□□□□ -0.69
ATXN3-203ENST00000393287 TIAM1Q13009 1591 aa10.75□□□□□ -0.69
ATXN3-203ENST00000393287 ROCK2O75116 1388 aaKnown RBP10.75□□□□□ -0.69
ATXN3-203ENST00000393287 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.75□□□□□ -0.69
ATXN3-203ENST00000393287 THEMISQ8N1K5 641 aaPredicted RBP10.74□□□□□ -0.69
ATXN3-203ENST00000393287 CCDC141Q6ZP82 1450 aa10.73□□□□□ -0.69
ATXN3-203ENST00000393287 MRS2Q9HD23 443 aa10.73□□□□□ -0.69
ATXN3-203ENST00000393287 SLC52A1Q9NWF4 448 aa10.73□□□□□ -0.69
ATXN3-203ENST00000393287 FOXD1Q16676 465 aa10.73□□□□□ -0.69
ATXN3-203ENST00000393287 MAPK8IP3Q9UPT6 1336 aa10.72□□□□□ -0.69
ATXN3-203ENST00000393287 EIF5BO60841 1220 aaKnown RBP10.72□□□□□ -0.69
ATXN3-203ENST00000393287 UHRF1BP1LA0JNW5 1464 aa10.71□□□□□ -0.69
ATXN3-203ENST00000393287 CHMP4BQ9H444 224 aaKnown RBP10.71□□□□□ -0.69
ATXN3-203ENST00000393287 SRPK2P78362 688 aaKnown RBP10.71□□□□□ -0.69
ATXN3-203ENST00000393287 ZBTB7CA1YPR0 619 aa10.7□□□□□ -0.7
ATXN3-203ENST00000393287 RRBP1Q9P2E9 1410 aaKnown RBP10.7□□□□□ -0.7
ATXN3-203ENST00000393287 RAPGEF6Q8TEU7 1601 aa10.7□□□□□ -0.7
ATXN3-203ENST00000393287 PCF11O94913 1555 aaKnown RBP10.7□□□□□ -0.7
ATXN3-203ENST00000393287 CHMP4AQ9BY43 222 aa10.7□□□□□ -0.7
ATXN3-203ENST00000393287 PBRM1Q86U86 1689 aa10.7□□□□□ -0.7
ATXN3-203ENST00000393287 KIAA1107Q9UPP5 1409 aa10.69□□□□□ -0.7
ATXN3-203ENST00000393287 MYH16Q9H6N6 1097 aa10.69□□□□□ -0.7
ATXN3-203ENST00000393287 TERF2IPQ9NYB0 399 aa10.69□□□□□ -0.7
ATXN3-203ENST00000393287 CTTNBP2Q8WZ74 1663 aa10.69□□□□□ -0.7
ATXN3-203ENST00000393287 STK26Q9P289 416 aa10.69□□□□□ -0.7
ATXN3-203ENST00000393287 ROCK1Q13464 1354 aa10.68□□□□□ -0.7
ATXN3-203ENST00000393287 DAPK1P53355 1430 aa10.68□□□□□ -0.7
ATXN3-203ENST00000393287 FAM9BQ8IZU0 186 aa10.68□□□□□ -0.7
ATXN3-203ENST00000393287 DHX29Q7Z478 1369 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms