RNA–Protein interactions for RNA: ENST00000393272.7

NPHP1-203, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 2,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-203ENST00000393272 SKAP1Q86WV1 359 aa9.52□□□□□ -0.88
NPHP1-203ENST00000393272 ATAD2BQ9ULI0 1458 aa9.52□□□□□ -0.88
NPHP1-203ENST00000393272 VSIG10Q8N0Z9 540 aa9.52□□□□□ -0.89
NPHP1-203ENST00000393272 DENND4BO75064 1496 aaPredicted RBP9.51□□□□□ -0.89
NPHP1-203ENST00000393272 FMN1Q68DA7 1419 aa9.51□□□□□ -0.89
NPHP1-203ENST00000393272 FRAT2O75474 233 aaPredicted RBP9.51□□□□□ -0.89
NPHP1-203ENST00000393272 P3H3Q8IVL6 736 aa9.5□□□□□ -0.89
NPHP1-203ENST00000393272 DHX29Q7Z478 1369 aaKnown RBP9.5□□□□□ -0.89
NPHP1-203ENST00000393272 L3MBTL2Q969R5 705 aa9.49□□□□□ -0.89
NPHP1-203ENST00000393272 RRAGDQ9NQL2 400 aaPredicted RBP9.49□□□□□ -0.89
NPHP1-203ENST00000393272 HECW1Q76N89 1606 aa9.49□□□□□ -0.89
NPHP1-203ENST00000393272 FYCO1Q9BQS8 1478 aa9.48□□□□□ -0.89
NPHP1-203ENST00000393272 DAXXQ9UER7 740 aaPredicted RBP9.48□□□□□ -0.89
NPHP1-203ENST00000393272 SPATA31E1Q6ZUB1 1445 aa9.48□□□□□ -0.89
NPHP1-203ENST00000393272 PNISRQ8TF01 805 aaKnown RBP9.47□□□□□ -0.89
NPHP1-203ENST00000393272 RCAN3Q9UKA8 241 aa9.47□□□□□ -0.89
NPHP1-203ENST00000393272 FHOD3Q2V2M9 1422 aa9.47□□□□□ -0.89
NPHP1-203ENST00000393272 NBPF8Q3BBV2 869 aa9.46□□□□□ -0.89
NPHP1-203ENST00000393272 PABPN1Q86U42 306 aaKnown RBP eCLIP9.46□□□□□ -0.89
NPHP1-203ENST00000393272 IGF1RP08069 1367 aa9.46□□□□□ -0.9
NPHP1-203ENST00000393272 BICRAQ9NZM4 1560 aa9.45□□□□□ -0.9
NPHP1-203ENST00000393272 CASKIN1Q8WXD9 1431 aa9.44□□□□□ -0.9
NPHP1-203ENST00000393272 TMC1Q8TDI8 760 aa9.44□□□□□ -0.9
NPHP1-203ENST00000393272 KDM6BO15054 1643 aa9.43□□□□□ -0.9
NPHP1-203ENST00000393272 FOXD1Q16676 465 aa9.43□□□□□ -0.9
NPHP1-203ENST00000393272 RRP7BPQ9NSQ0 103 aa9.43□□□□□ -0.9
NPHP1-203ENST00000393272 POGKQ9P215 609 aa9.43□□□□□ -0.9
NPHP1-203ENST00000393272 CARMIL1Q5VZK9 1371 aa9.43□□□□□ -0.9
NPHP1-203ENST00000393272 GCC2Q8IWJ2 1684 aa9.43□□□□□ -0.9
NPHP1-203ENST00000393272 POLR3GLQ9BT43 218 aa9.43□□□□□ -0.9
NPHP1-203ENST00000393272 TEX14Q8IWB6 1497 aa9.42□□□□□ -0.9
NPHP1-203ENST00000393272 LRPPRCP42704 1394 aaKnown RBP9.42□□□□□ -0.9
NPHP1-203ENST00000393272 BCORL1Q5H9F3 1711 aa9.42□□□□□ -0.9
NPHP1-203ENST00000393272 HSP90AA2PQ14568 343 aaPredicted RBP9.42□□□□□ -0.9
NPHP1-203ENST00000393272 FGD5Q6ZNL6 1462 aa9.42□□□□□ -0.9
NPHP1-203ENST00000393272 MTUS2Q5JR59 1369 aa9.42□□□□□ -0.9
NPHP1-203ENST00000393272 NAP1L5Q96NT1 182 aaPredicted RBP9.42□□□□□ -0.9
NPHP1-203ENST00000393272 PLIN1O60240 522 aa9.41□□□□□ -0.9
NPHP1-203ENST00000393272 MYOM3Q5VTT5 1437 aa9.41□□□□□ -0.9
NPHP1-203ENST00000393272 RRP9O43818 475 aaKnown RBP9.41□□□□□ -0.9
NPHP1-203ENST00000393272 PLEKHG5O94827 1062 aa9.4□□□□□ -0.9
NPHP1-203ENST00000393272 CRBNQ96SW2 442 aa9.4□□□□□ -0.9
NPHP1-203ENST00000393272 MPHOSPH9Q99550 1183 aa9.4□□□□□ -0.9
NPHP1-203ENST00000393272 PODXL2Q9NZ53 605 aa9.4□□□□□ -0.9
NPHP1-203ENST00000393272 CHIC2Q9UKJ5 165 aa9.4□□□□□ -0.9
NPHP1-203ENST00000393272 MIA2Q96PC5 1412 aa9.4□□□□□ -0.91
NPHP1-203ENST00000393272 RPRD2Q5VT52 1461 aaKnown RBP9.4□□□□□ -0.91
NPHP1-203ENST00000393272 C8orf34Q49A92 452 aa9.4□□□□□ -0.91
NPHP1-203ENST00000393272 HSP90AA1P07900 732 aaKnown RBP9.39□□□□□ -0.91
NPHP1-203ENST00000393272 PNNQ9H307 717 aaKnown RBP9.39□□□□□ -0.91
NPHP1-203ENST00000393272 LRRIQ1Q96JM4 1722 aa9.38□□□□□ -0.91
NPHP1-203ENST00000393272 FAM161AQ3B820 660 aa9.38□□□□□ -0.91
NPHP1-203ENST00000393272 EFCAB5A4FU69 1503 aa9.38□□□□□ -0.91
NPHP1-203ENST00000393272 SNAPC4Q5SXM2 1469 aa9.37□□□□□ -0.91
NPHP1-203ENST00000393272 KTN1Q86UP2 1357 aaKnown RBP9.37□□□□□ -0.91
NPHP1-203ENST00000393272 KDM2BQ8NHM5 1336 aa9.37□□□□□ -0.91
NPHP1-203ENST00000393272 CDCA7LQ96GN5 454 aa9.37□□□□□ -0.91
NPHP1-203ENST00000393272 ARXQ96QS3 562 aa9.37□□□□□ -0.91
NPHP1-203ENST00000393272 L1TD1Q5T7N2 865 aaKnown RBP9.36□□□□□ -0.91
NPHP1-203ENST00000393272 CFTRP13569 1480 aa9.36□□□□□ -0.91
NPHP1-203ENST00000393272 BRD4O60885 1362 aaPredicted RBP9.36□□□□□ -0.91
NPHP1-203ENST00000393272 USP47Q96K76 1375 aa9.36□□□□□ -0.91
NPHP1-203ENST00000393272 ANKRD30BQ9BXX2 1392 aa9.36□□□□□ -0.91
NPHP1-203ENST00000393272 SUPT6HQ7KZ85 1726 aaKnown RBP9.36□□□□□ -0.91
NPHP1-203ENST00000393272 CLCN1P35523 988 aa9.35□□□□□ -0.91
NPHP1-203ENST00000393272 MYBBP1AQ9BQG0 1328 aaKnown RBP9.35□□□□□ -0.91
NPHP1-203ENST00000393272 PDE3BQ13370 1112 aa9.35□□□□□ -0.91
NPHP1-203ENST00000393272 C20orf194Q5TEA3 1177 aa9.35□□□□□ -0.91
NPHP1-203ENST00000393272 KIF15Q9NS87 1388 aa9.34□□□□□ -0.91
NPHP1-203ENST00000393272 KDM5CP41229 1560 aa9.33□□□□□ -0.92
NPHP1-203ENST00000393272 CENPQQ7L2Z9 268 aaPredicted RBP9.33□□□□□ -0.92
NPHP1-203ENST00000393272 PANK2Q9BZ23 570 aa9.33□□□□□ -0.92
NPHP1-203ENST00000393272 VIRMAQ69YN4 1812 aaKnown RBP9.33□□□□□ -0.92
NPHP1-203ENST00000393272 XRCC6P12956 609 aaKnown RBP eCLIP9.33□□□□□ -0.92
NPHP1-203ENST00000393272 UGGT2Q9NYU1 1516 aa9.32□□□□□ -0.92
NPHP1-203ENST00000393272 RGS3P49796 1198 aa9.32□□□□□ -0.92
NPHP1-203ENST00000393272 SLKQ9H2G2 1235 aaPredicted RBP9.32□□□□□ -0.92
NPHP1-203ENST00000393272 EHBP1L1Q8N3D4 1523 aa9.32□□□□□ -0.92
NPHP1-203ENST00000393272 ROCK2O75116 1388 aaKnown RBP9.31□□□□□ -0.92
NPHP1-203ENST00000393272 ARID4BQ4LE39 1312 aaPredicted RBP9.31□□□□□ -0.92
NPHP1-203ENST00000393272 THOC2Q8NI27 1593 aaKnown RBP9.31□□□□□ -0.92
NPHP1-203ENST00000393272 ZNF326Q5BKZ1 582 aaKnown RBP9.31□□□□□ -0.92
NPHP1-203ENST00000393272 CTTNBP2Q8WZ74 1663 aa9.31□□□□□ -0.92
NPHP1-203ENST00000393272 TCOF1Q13428 1488 aaKnown RBP9.31□□□□□ -0.92
NPHP1-203ENST00000393272 MBD5Q9P267 1494 aa9.31□□□□□ -0.92
NPHP1-203ENST00000393272 KIF14Q15058 1648 aa9.3□□□□□ -0.92
NPHP1-203ENST00000393272 ARHGEF11O15085 1522 aa9.3□□□□□ -0.92
NPHP1-203ENST00000393272 USP19O94966 1318 aa9.3□□□□□ -0.92
NPHP1-203ENST00000393272 FSD2A1L4K1 749 aa9.29□□□□□ -0.92
NPHP1-203ENST00000393272 GOLGA6L3A6NEY3 463 aa9.29□□□□□ -0.92
NPHP1-203ENST00000393272 RALBP1Q15311 655 aa9.29□□□□□ -0.92
NPHP1-203ENST00000393272 MAGI3Q5TCQ9 1506 aa9.29□□□□□ -0.92
NPHP1-203ENST00000393272 E9PCH4 1651 aa9.29□□□□□ -0.92
NPHP1-203ENST00000393272 GRIN2BQ13224 1484 aa9.28□□□□□ -0.92
NPHP1-203ENST00000393272 NLRP13Q86W25 1043 aa9.28□□□□□ -0.92
NPHP1-203ENST00000393272 GZF1Q9H116 711 aaPredicted RBP9.27□□□□□ -0.93
NPHP1-203ENST00000393272 ANTXR1Q9H6X2 564 aa9.27□□□□□ -0.93
NPHP1-203ENST00000393272 SLC4A1APQ9BWU0 796 aaKnown RBP9.27□□□□□ -0.93
NPHP1-203ENST00000393272 ERBB4Q15303 1308 aa9.27□□□□□ -0.93
NPHP1-203ENST00000393272 PRDM2Q13029 1718 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms