RNA–Protein interactions for RNA: ENST00000393240.7

SYT1-202, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 3,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-202ENST00000393240 DNMT1P26358 1616 aaKnown RBP14.28□□□□□ -0.12
SYT1-202ENST00000393240 ACIN1Q9UKV3 1341 aaKnown RBP14.26□□□□□ -0.13
SYT1-202ENST00000393240 ZCCHC11Q5TAX3 1644 aaKnown RBP14.26□□□□□ -0.13
SYT1-202ENST00000393240 CDC42BPAQ5VT25 1732 aa14.26□□□□□ -0.13
SYT1-202ENST00000393240 CHIC2Q9UKJ5 165 aa14.26□□□□□ -0.13
SYT1-202ENST00000393240 ZNF777Q9ULD5 760 aaPredicted RBP14.24□□□□□ -0.13
SYT1-202ENST00000393240 RRP7BPQ9NSQ0 103 aa14.23□□□□□ -0.13
SYT1-202ENST00000393240 MAPKBP1O60336 1514 aa14.23□□□□□ -0.13
SYT1-202ENST00000393240 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.23□□□□□ -0.13
SYT1-202ENST00000393240 GCC2Q8IWJ2 1684 aa14.23□□□□□ -0.13
SYT1-202ENST00000393240 PREX2Q70Z35 1606 aa14.21□□□□□ -0.13
SYT1-202ENST00000393240 RSPH4AQ5TD94 716 aa14.21□□□□□ -0.14
SYT1-202ENST00000393240 ADGRL2O95490 1459 aa14.2□□□□□ -0.14
SYT1-202ENST00000393240 KCNH8Q96L42 1107 aa14.19□□□□□ -0.14
SYT1-202ENST00000393240 TTC37Q6PGP7 1564 aa14.19□□□□□ -0.14
SYT1-202ENST00000393240 NCOA1Q15788 1441 aa14.19□□□□□ -0.14
SYT1-202ENST00000393240 SHANK2Q9UPX8 1470 aa14.19□□□□□ -0.14
SYT1-202ENST00000393240 ARHGEF5Q12774 1597 aa14.18□□□□□ -0.14
SYT1-202ENST00000393240 PLCH2O75038 1416 aa14.18□□□□□ -0.14
SYT1-202ENST00000393240 CDC42BPBQ9Y5S2 1711 aa14.18□□□□□ -0.14
SYT1-202ENST00000393240 MBD5Q9P267 1494 aa14.18□□□□□ -0.14
SYT1-202ENST00000393240 WDR7Q9Y4E6 1490 aa14.18□□□□□ -0.14
SYT1-202ENST00000393240 CROCC2H7BZ55 1655 aa14.16□□□□□ -0.14
SYT1-202ENST00000393240 ANKRD30AQ9BXX3 1397 aa14.16□□□□□ -0.14
SYT1-202ENST00000393240 TSPY4P0CV99 314 aa14.16□□□□□ -0.14
SYT1-202ENST00000393240 TSPY10P0CW01 314 aa14.16□□□□□ -0.14
SYT1-202ENST00000393240 SAMD9LQ8IVG5 1584 aa14.16□□□□□ -0.14
SYT1-202ENST00000393240 ARHGAP5Q13017 1502 aa14.16□□□□□ -0.14
SYT1-202ENST00000393240 PLEKHH2Q8IVE3 1493 aa14.16□□□□□ -0.14
SYT1-202ENST00000393240 KIAA1107Q9UPP5 1409 aa14.16□□□□□ -0.14
SYT1-202ENST00000393240 TIMELESSQ9UNS1 1208 aa14.16□□□□□ -0.14
SYT1-202ENST00000393240 ADGBQ8N7X0 1667 aa14.15□□□□□ -0.14
SYT1-202ENST00000393240 NPM1P06748 294 aaKnown RBP eCLIP14.15□□□□□ -0.14
SYT1-202ENST00000393240 HNRNPMP52272 730 aaKnown RBP eCLIP14.15□□□□□ -0.14
SYT1-202ENST00000393240 MYO5CQ9NQX4 1742 aa14.15□□□□□ -0.14
SYT1-202ENST00000393240 C9orf84Q5VXU9 1444 aa14.14□□□□□ -0.15
SYT1-202ENST00000393240 ARAP3Q8WWN8 1544 aa14.14□□□□□ -0.15
SYT1-202ENST00000393240 KDM6BO15054 1643 aa14.14□□□□□ -0.15
SYT1-202ENST00000393240 EFCAB2Q5VUJ9 269 aa14.13□□□□□ -0.15
SYT1-202ENST00000393240 CCDC141Q6ZP82 1450 aa14.13□□□□□ -0.15
SYT1-202ENST00000393240 ASXL2Q76L83 1435 aa14.13□□□□□ -0.15
SYT1-202ENST00000393240 TRIM52Q96A61 297 aa14.11□□□□□ -0.15
SYT1-202ENST00000393240 SIN3AQ96ST3 1273 aa14.09□□□□□ -0.15
SYT1-202ENST00000393240 MPHOSPH9Q99550 1183 aa14.09□□□□□ -0.15
SYT1-202ENST00000393240 SYCP2Q9BX26 1530 aa14.09□□□□□ -0.15
SYT1-202ENST00000393240 ABCA9Q8IUA7 1624 aa14.09□□□□□ -0.15
SYT1-202ENST00000393240 MAST1Q9Y2H9 1570 aa14.08□□□□□ -0.15
SYT1-202ENST00000393240 ANKRD50Q9ULJ7 1429 aa14.08□□□□□ -0.16
SYT1-202ENST00000393240 ZNF316A6NFI3 1004 aaPredicted RBP14.07□□□□□ -0.16
SYT1-202ENST00000393240 DENND4BO75064 1496 aaPredicted RBP14.07□□□□□ -0.16
SYT1-202ENST00000393240 KIF15Q9NS87 1388 aa14.06□□□□□ -0.16
SYT1-202ENST00000393240 NEUROD1Q13562 356 aa14.06□□□□□ -0.16
SYT1-202ENST00000393240 ARHGEF12Q9NZN5 1544 aa14.06□□□□□ -0.16
SYT1-202ENST00000393240 ABCC1P33527 1531 aa14.05□□□□□ -0.16
SYT1-202ENST00000393240 FANCAO15360 1455 aa14.02□□□□□ -0.16
SYT1-202ENST00000393240 SLC4A1APQ9BWU0 796 aaKnown RBP14.02□□□□□ -0.16
SYT1-202ENST00000393240 PZPP20742 1482 aa14.01□□□□□ -0.17
SYT1-202ENST00000393240 PLXNC1O60486 1568 aa14.01□□□□□ -0.17
SYT1-202ENST00000393240 RIMBP3CA6NJZ7 1639 aa14.01□□□□□ -0.17
SYT1-202ENST00000393240 RIMBP3BA6NNM3 1639 aa14.01□□□□□ -0.17
SYT1-202ENST00000393240 RIMBP3Q9UFD9 1639 aa14.01□□□□□ -0.17
SYT1-202ENST00000393240 RTEL1-TNFRSF6BF6WH68 1400 aa14□□□□□ -0.17
SYT1-202ENST00000393240 PPP1R15AO75807 674 aaPredicted RBP14□□□□□ -0.17
SYT1-202ENST00000393240 CYB5RLQ6IPT4 315 aa14□□□□□ -0.17
SYT1-202ENST00000393240 TRAPPC8Q9Y2L5 1435 aa14□□□□□ -0.17
SYT1-202ENST00000393240 TONSLQ96HA7 1378 aa14□□□□□ -0.17
SYT1-202ENST00000393240 ANKRD30BQ9BXX2 1392 aa14□□□□□ -0.17
SYT1-202ENST00000393240 KDM5DQ9BY66 1539 aa13.99□□□□□ -0.17
SYT1-202ENST00000393240 CD109Q6YHK3 1445 aa13.98□□□□□ -0.17
SYT1-202ENST00000393240 NUP155O75694 1391 aa13.98□□□□□ -0.17
SYT1-202ENST00000393240 DUOX2Q9NRD8 1548 aa13.97□□□□□ -0.17
SYT1-202ENST00000393240 SPAG9O60271 1321 aaKnown RBP13.96□□□□□ -0.17
SYT1-202ENST00000393240 ADGRL1O94910 1474 aa13.96□□□□□ -0.17
SYT1-202ENST00000393240 AFAP1Q8N556 730 aa13.96□□□□□ -0.18
SYT1-202ENST00000393240 ERBINQ96RT1 1412 aa13.96□□□□□ -0.18
SYT1-202ENST00000393240 SCAPERQ9BY12 1400 aa13.96□□□□□ -0.18
SYT1-202ENST00000393240 FOXD1Q16676 465 aa13.95□□□□□ -0.18
SYT1-202ENST00000393240 CFAP74Q9C0B2 1584 aa13.94□□□□□ -0.18
SYT1-202ENST00000393240 PKD2Q13563 968 aa13.94□□□□□ -0.18
SYT1-202ENST00000393240 DIEXFQ68CQ4 756 aaKnown RBP13.94□□□□□ -0.18
SYT1-202ENST00000393240 RPRD2Q5VT52 1461 aaKnown RBP13.94□□□□□ -0.18
SYT1-202ENST00000393240 ZFYVE16Q7Z3T8 1539 aa13.93□□□□□ -0.18
SYT1-202ENST00000393240 UNC13BO14795 1591 aa13.92□□□□□ -0.18
SYT1-202ENST00000393240 GLI2P10070 1586 aa13.91□□□□□ -0.18
SYT1-202ENST00000393240 NEO1Q92859 1461 aa13.91□□□□□ -0.18
SYT1-202ENST00000393240 INO80Q9ULG1 1556 aaPredicted RBP13.9□□□□□ -0.18
SYT1-202ENST00000393240 ZNF518AQ6AHZ1 1483 aa13.9□□□□□ -0.18
SYT1-202ENST00000393240 ATP7AQ04656 1500 aa13.89□□□□□ -0.19
SYT1-202ENST00000393240 FAM135AQ9P2D6 1515 aa13.89□□□□□ -0.19
SYT1-202ENST00000393240 MAGI2Q86UL8 1455 aa13.89□□□□□ -0.19
SYT1-202ENST00000393240 L3MBTL2Q969R5 705 aa13.87□□□□□ -0.19
SYT1-202ENST00000393240 POGZQ7Z3K3 1410 aa13.86□□□□□ -0.19
SYT1-202ENST00000393240 MAP3K4Q9Y6R4 1608 aa13.86□□□□□ -0.19
SYT1-202ENST00000393240 DHX29Q7Z478 1369 aaKnown RBP13.86□□□□□ -0.19
SYT1-202ENST00000393240 IQGAP3Q86VI3 1631 aa13.86□□□□□ -0.19
SYT1-202ENST00000393240 KDM5CP41229 1560 aa13.85□□□□□ -0.19
SYT1-202ENST00000393240 MLH3Q9UHC1 1453 aa13.85□□□□□ -0.19
SYT1-202ENST00000393240 TEX14Q8IWB6 1497 aa13.85□□□□□ -0.19
SYT1-202ENST00000393240 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.84□□□□□ -0.19
SYT1-202ENST00000393240 MYT1LQ9UL68 1186 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms