RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 UHRF1BP1LA0JNW5 1464 aa16.07■□□□□ 0.16
PDCD4-202ENST00000393104 JPH4Q96JJ6 628 aa16.07■□□□□ 0.16
PDCD4-202ENST00000393104 PRG4Q92954 1404 aaPredicted RBP16.06■□□□□ 0.16
PDCD4-202ENST00000393104 ANP32CO43423 234 aa16.04■□□□□ 0.16
PDCD4-202ENST00000393104 C11orf95C9JLR9 678 aaPredicted RBP16.04■□□□□ 0.16
PDCD4-202ENST00000393104 P3H3Q8IVL6 736 aa16.04■□□□□ 0.16
PDCD4-202ENST00000393104 TCOF1Q13428 1488 aaKnown RBP16.04■□□□□ 0.16
PDCD4-202ENST00000393104 GCC2Q8IWJ2 1684 aa16.03■□□□□ 0.16
PDCD4-202ENST00000393104 IRX6P78412 446 aaPredicted RBP16.03■□□□□ 0.16
PDCD4-202ENST00000393104 ITSN2Q9NZM3 1697 aa16.02■□□□□ 0.16
PDCD4-202ENST00000393104 ABCC2Q92887 1545 aa16.02■□□□□ 0.15
PDCD4-202ENST00000393104 CDK13Q14004 1512 aaKnown RBP16.01■□□□□ 0.15
PDCD4-202ENST00000393104 POLR1AO95602 1720 aaPredicted RBP16.01■□□□□ 0.15
PDCD4-202ENST00000393104 ERCC6L2Q5T890 1561 aa15.99■□□□□ 0.15
PDCD4-202ENST00000393104 PLB1Q6P1J6 1458 aa15.98■□□□□ 0.15
PDCD4-202ENST00000393104 MIA2Q96PC5 1412 aa15.97■□□□□ 0.15
PDCD4-202ENST00000393104 MYOM3Q5VTT5 1437 aa15.97■□□□□ 0.15
PDCD4-202ENST00000393104 TROQ12816 1431 aaPredicted RBP15.96■□□□□ 0.15
PDCD4-202ENST00000393104 TONSLQ96HA7 1378 aa15.95■□□□□ 0.14
PDCD4-202ENST00000393104 NCOA1Q15788 1441 aa15.95■□□□□ 0.14
PDCD4-202ENST00000393104 SPATA31E1Q6ZUB1 1445 aa15.95■□□□□ 0.14
PDCD4-202ENST00000393104 FBLN2P98095 1184 aa15.95■□□□□ 0.14
PDCD4-202ENST00000393104 MTUS2Q5JR59 1369 aa15.94■□□□□ 0.14
PDCD4-202ENST00000393104 PTPRGP23470 1445 aa15.94■□□□□ 0.14
PDCD4-202ENST00000393104 KIF14Q15058 1648 aa15.94■□□□□ 0.14
PDCD4-202ENST00000393104 ATP10BO94823 1461 aa15.94■□□□□ 0.14
PDCD4-202ENST00000393104 HSPA5P11021 654 aaKnown RBP15.93■□□□□ 0.14
PDCD4-202ENST00000393104 HNRNPUQ00839 825 aaKnown RBP eCLIP15.93■□□□□ 0.14
PDCD4-202ENST00000393104 CNTLNQ9NXG0 1405 aa15.93■□□□□ 0.14
PDCD4-202ENST00000393104 NEFLP07196 543 aa15.93■□□□□ 0.14
PDCD4-202ENST00000393104 ZCCHC11Q5TAX3 1644 aaKnown RBP15.92■□□□□ 0.14
PDCD4-202ENST00000393104 ABCC10Q5T3U5 1492 aa15.91■□□□□ 0.14
PDCD4-202ENST00000393104 CDC42BPAQ5VT25 1732 aa15.91■□□□□ 0.14
PDCD4-202ENST00000393104 TEX14Q8IWB6 1497 aa15.9■□□□□ 0.14
PDCD4-202ENST00000393104 CROCC2H7BZ55 1655 aa15.9■□□□□ 0.14
PDCD4-202ENST00000393104 AKNAQ7Z591 1439 aa15.89■□□□□ 0.13
PDCD4-202ENST00000393104 PREX2Q70Z35 1606 aa15.88■□□□□ 0.13
PDCD4-202ENST00000393104 BCORL1Q5H9F3 1711 aa15.88■□□□□ 0.13
PDCD4-202ENST00000393104 DNMT1P26358 1616 aaKnown RBP15.87■□□□□ 0.13
PDCD4-202ENST00000393104 PRKRIP1Q9H875 184 aaPredicted RBP15.86■□□□□ 0.13
PDCD4-202ENST00000393104 ERICH6BQ5W0A0 696 aa15.86■□□□□ 0.13
PDCD4-202ENST00000393104 CCDC7Q96M83 1385 aa15.85■□□□□ 0.13
PDCD4-202ENST00000393104 PAK3O75914 559 aaPredicted RBP15.85■□□□□ 0.13
PDCD4-202ENST00000393104 RNF123Q5XPI4 1314 aa15.85■□□□□ 0.13
PDCD4-202ENST00000393104 ARAP3Q8WWN8 1544 aa15.85■□□□□ 0.13
PDCD4-202ENST00000393104 NBPF8Q3BBV2 869 aa15.84■□□□□ 0.13
PDCD4-202ENST00000393104 CDK11AQ9UQ88 783 aaPredicted RBP15.84■□□□□ 0.13
PDCD4-202ENST00000393104 ADGBQ8N7X0 1667 aa15.84■□□□□ 0.13
PDCD4-202ENST00000393104 PPP4R2Q9NY27 417 aa15.84■□□□□ 0.13
PDCD4-202ENST00000393104 DHX29Q7Z478 1369 aaKnown RBP15.83■□□□□ 0.12
PDCD4-202ENST00000393104 B4GALNT3Q6L9W6 998 aa15.83■□□□□ 0.12
PDCD4-202ENST00000393104 ZBED9Q6R2W3 1325 aa15.82■□□□□ 0.12
PDCD4-202ENST00000393104 ARHGEF5Q12774 1597 aa15.82■□□□□ 0.12
PDCD4-202ENST00000393104 MYO5CQ9NQX4 1742 aa15.81■□□□□ 0.12
PDCD4-202ENST00000393104 GPATCH8Q9UKJ3 1502 aaKnown RBP15.81■□□□□ 0.12
PDCD4-202ENST00000393104 CDC42BPBQ9Y5S2 1711 aa15.8■□□□□ 0.12
PDCD4-202ENST00000393104 L3MBTL2Q969R5 705 aa15.8■□□□□ 0.12
PDCD4-202ENST00000393104 ANKRD30BQ9BXX2 1392 aa15.8■□□□□ 0.12
PDCD4-202ENST00000393104 RPRD2Q5VT52 1461 aaKnown RBP15.8■□□□□ 0.12
PDCD4-202ENST00000393104 MBD5Q9P267 1494 aa15.8■□□□□ 0.12
PDCD4-202ENST00000393104 ATP1B4Q9UN42 357 aaPredicted RBP15.79■□□□□ 0.12
PDCD4-202ENST00000393104 OSCARQ8IYS5 282 aa15.78■□□□□ 0.12
PDCD4-202ENST00000393104 SHANK2Q9UPX8 1470 aa15.78■□□□□ 0.12
PDCD4-202ENST00000393104 FOXD1Q16676 465 aa15.77■□□□□ 0.11
PDCD4-202ENST00000393104 KIF7Q2M1P5 1343 aa15.76■□□□□ 0.11
PDCD4-202ENST00000393104 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.76■□□□□ 0.119e-7■■■□□ 17.5
PDCD4-202ENST00000393104 MAST1Q9Y2H9 1570 aa15.76■□□□□ 0.11
PDCD4-202ENST00000393104 ABCA9Q8IUA7 1624 aa15.76■□□□□ 0.11
PDCD4-202ENST00000393104 ADGRL2O95490 1459 aa15.76■□□□□ 0.11
PDCD4-202ENST00000393104 TTC37Q6PGP7 1564 aa15.76■□□□□ 0.11
PDCD4-202ENST00000393104 RRP7BPQ9NSQ0 103 aa15.75■□□□□ 0.11
PDCD4-202ENST00000393104 SMG6Q86US8 1419 aaKnown RBP15.75■□□□□ 0.11
PDCD4-202ENST00000393104 CAMSAP2Q08AD1 1489 aa15.75■□□□□ 0.11
PDCD4-202ENST00000393104 ROCK1Q13464 1354 aa15.75■□□□□ 0.11
PDCD4-202ENST00000393104 DEKP35659 375 aaKnown RBP15.74■□□□□ 0.11
PDCD4-202ENST00000393104 MPHOSPH9Q99550 1183 aa15.73■□□□□ 0.11
PDCD4-202ENST00000393104 EIF4G2P78344 907 aaKnown RBP eCLIP15.72■□□□□ 0.11
PDCD4-202ENST00000393104 SAMD9LQ8IVG5 1584 aa15.71■□□□□ 0.11
PDCD4-202ENST00000393104 DAPK1P53355 1430 aa15.7■□□□□ 0.1
PDCD4-202ENST00000393104 KDM5CP41229 1560 aa15.7■□□□□ 0.1
PDCD4-202ENST00000393104 PZPP20742 1482 aa15.7■□□□□ 0.1
PDCD4-202ENST00000393104 WDR7Q9Y4E6 1490 aa15.69■□□□□ 0.1
PDCD4-202ENST00000393104 FAM9BQ8IZU0 186 aa15.69■□□□□ 0.1
PDCD4-202ENST00000393104 CHIC2Q9UKJ5 165 aa15.69■□□□□ 0.1
PDCD4-202ENST00000393104 PLEKHH2Q8IVE3 1493 aa15.69■□□□□ 0.1
PDCD4-202ENST00000393104 PLEKHD1A6NEE1 506 aa15.69■□□□□ 0.1
PDCD4-202ENST00000393104 RIMBP3CA6NJZ7 1639 aa15.68■□□□□ 0.1
PDCD4-202ENST00000393104 RIMBP3BA6NNM3 1639 aa15.68■□□□□ 0.1
PDCD4-202ENST00000393104 RIMBP3Q9UFD9 1639 aa15.68■□□□□ 0.1
PDCD4-202ENST00000393104 CFAP74Q9C0B2 1584 aa15.67■□□□□ 0.1
PDCD4-202ENST00000393104 E9PCH4 1651 aa15.67■□□□□ 0.1
PDCD4-202ENST00000393104 ABCC5O15440 1437 aa15.67■□□□□ 0.1
PDCD4-202ENST00000393104 PLXNC1O60486 1568 aa15.66■□□□□ 0.1
PDCD4-202ENST00000393104 KIAA1107Q9UPP5 1409 aa15.66■□□□□ 0.1
PDCD4-202ENST00000393104 MRS2Q9HD23 443 aa15.66■□□□□ 0.1
PDCD4-202ENST00000393104 NOP58Q9Y2X3 529 aaKnown RBP15.64■□□□□ 0.09
PDCD4-202ENST00000393104 ABCC1P33527 1531 aa15.63■□□□□ 0.09
PDCD4-202ENST00000393104 PLCH2O75038 1416 aa15.63■□□□□ 0.09
PDCD4-202ENST00000393104 GLI2P10070 1586 aa15.63■□□□□ 0.09
PDCD4-202ENST00000393104 LRPPRCP42704 1394 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms