RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 SETD5Q9C0A6 1442 aa25.31■■□□□ 1.64
SHANK1-203ENST00000391813 CCDC18Q5T9S5 1454 aa25.3■■□□□ 1.64
SHANK1-203ENST00000391813 MS4A1P11836 297 aa25.3■■□□□ 1.64
SHANK1-203ENST00000391813 MSNP26038 577 aaKnown RBP25.3■■□□□ 1.64
SHANK1-203ENST00000391813 CFAP53Q96M91 514 aa25.3■■□□□ 1.64
SHANK1-203ENST00000391813 CASC1Q6TDU7 716 aa25.29■■□□□ 1.64
SHANK1-203ENST00000391813 CYB5RLQ6IPT4 315 aa25.29■■□□□ 1.64
SHANK1-203ENST00000391813 FHOD3Q2V2M9 1422 aa25.29■■□□□ 1.64
SHANK1-203ENST00000391813 POGKQ9P215 609 aa25.28■■□□□ 1.64
SHANK1-203ENST00000391813 HSP90AB1P08238 724 aaKnown RBP25.27■■□□□ 1.64
SHANK1-203ENST00000391813 ANKRD30AQ9BXX3 1397 aa25.26■■□□□ 1.64
SHANK1-203ENST00000391813 HSCBQ8IWL3 235 aa25.26■■□□□ 1.63
SHANK1-203ENST00000391813 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.26■■□□□ 1.63
SHANK1-203ENST00000391813 CDK11BP21127 795 aaKnown RBP25.25■■□□□ 1.63
SHANK1-203ENST00000391813 CHMP4BQ9H444 224 aaKnown RBP25.25■■□□□ 1.63
SHANK1-203ENST00000391813 MRC2Q9UBG0 1479 aa25.25■■□□□ 1.63
SHANK1-203ENST00000391813 IGF1RP08069 1367 aa25.24■■□□□ 1.63
SHANK1-203ENST00000391813 HAP1P54257 671 aaPredicted RBP25.23■■□□□ 1.63
SHANK1-203ENST00000391813 SENP3Q9H4L4 574 aaPredicted RBP25.23■■□□□ 1.63
SHANK1-203ENST00000391813 RAD54L2Q9Y4B4 1467 aa25.22■■□□□ 1.63
SHANK1-203ENST00000391813 PTMSP20962 102 aa25.21■■□□□ 1.63
SHANK1-203ENST00000391813 SPAG9O60271 1321 aaKnown RBP25.21■■□□□ 1.63
SHANK1-203ENST00000391813 RSPH6AQ9H0K4 717 aa25.21■■□□□ 1.63
SHANK1-203ENST00000391813 HSPA5P11021 654 aaKnown RBP25.21■■□□□ 1.63
SHANK1-203ENST00000391813 GRIN2BQ13224 1484 aa25.19■■□□□ 1.62
SHANK1-203ENST00000391813 RCAN3Q9UKA8 241 aa25.18■■□□□ 1.62
SHANK1-203ENST00000391813 NUDCQ9Y266 331 aa25.18■■□□□ 1.62
SHANK1-203ENST00000391813 KANK4Q5T7N3 995 aaPredicted RBP25.17■■□□□ 1.62
SHANK1-203ENST00000391813 CHAF1AQ13111 956 aaPredicted RBP25.16■■□□□ 1.62
SHANK1-203ENST00000391813 FRAT1Q92837 279 aaPredicted RBP25.15■■□□□ 1.62
SHANK1-203ENST00000391813 IFT140Q96RY7 1462 aa25.15■■□□□ 1.62
SHANK1-203ENST00000391813 AQRO60306 1485 aaKnown RBP eCLIP25.14■■□□□ 1.61
SHANK1-203ENST00000391813 ZRSR1Q15695 479 aaKnown RBP25.12■■□□□ 1.61
SHANK1-203ENST00000391813 KIF3BO15066 747 aa25.11■■□□□ 1.61
SHANK1-203ENST00000391813 GBP4Q96PP9 640 aa25.11■■□□□ 1.61
SHANK1-203ENST00000391813 RAB3GAP2Q9H2M9 1393 aa25.1■■□□□ 1.61
SHANK1-203ENST00000391813 GOLGA6L3A6NEY3 463 aa25.1■■□□□ 1.61
SHANK1-203ENST00000391813 CFAP44Q96MT7 982 aa25.1■■□□□ 1.61
SHANK1-203ENST00000391813 ZBTB7CA1YPR0 619 aa25.09■■□□□ 1.61
SHANK1-203ENST00000391813 PKD2Q13563 968 aa25.09■■□□□ 1.61
SHANK1-203ENST00000391813 NESP48681 1621 aa25.08■■□□□ 1.6
SHANK1-203ENST00000391813 DCAF11Q8TEB1 546 aa25.07■■□□□ 1.6
SHANK1-203ENST00000391813 NUP155O75694 1391 aa25.07■■□□□ 1.6
SHANK1-203ENST00000391813 HNRNPMP52272 730 aaKnown RBP eCLIP25.06■■□□□ 1.6
SHANK1-203ENST00000391813 BICRAQ9NZM4 1560 aa25.05■■□□□ 1.6
SHANK1-203ENST00000391813 PDE3BQ13370 1112 aa25.04■■□□□ 1.6
SHANK1-203ENST00000391813 RALBP1Q15311 655 aa25.04■■□□□ 1.6
SHANK1-203ENST00000391813 PLCB2Q00722 1185 aa25.04■■□□□ 1.6
SHANK1-203ENST00000391813 GSE1Q14687 1217 aa25.04■■□□□ 1.6
SHANK1-203ENST00000391813 NEUROD2Q15784 382 aa25.04■■□□□ 1.6
SHANK1-203ENST00000391813 NRDCO43847 1150 aa25.03■■□□□ 1.6
SHANK1-203ENST00000391813 CC2D1BQ5T0F9 858 aaKnown RBP25.03■■□□□ 1.6
SHANK1-203ENST00000391813 MAPK8IP3Q9UPT6 1336 aa25.02■■□□□ 1.6
SHANK1-203ENST00000391813 HSP90AA2PQ14568 343 aaPredicted RBP25.01■■□□□ 1.59
SHANK1-203ENST00000391813 TMF1P82094 1093 aa25.01■■□□□ 1.59
SHANK1-203ENST00000391813 GOLGA6L6A8MZA4 724 aa25.01■■□□□ 1.59
SHANK1-203ENST00000391813 SLKQ9H2G2 1235 aaPredicted RBP25.01■■□□□ 1.59
SHANK1-203ENST00000391813 RUSC2Q8N2Y8 1516 aa25.01■■□□□ 1.59
SHANK1-203ENST00000391813 WASHC2CQ9Y4E1 1318 aa25■■□□□ 1.59
SHANK1-203ENST00000391813 A0A0G2JS52 829 aa24.99■■□□□ 1.59
SHANK1-203ENST00000391813 KTN1Q86UP2 1357 aaKnown RBP24.99■■□□□ 1.59
SHANK1-203ENST00000391813 PLEKHG5O94827 1062 aa24.99■■□□□ 1.59
SHANK1-203ENST00000391813 LMOD2Q6P5Q4 547 aa24.98■■□□□ 1.59
SHANK1-203ENST00000391813 DHX57Q6P158 1386 aaKnown RBP24.97■■□□□ 1.59
SHANK1-203ENST00000391813 EID1Q9Y6B2 187 aa24.97■■□□□ 1.59
SHANK1-203ENST00000391813 TOPBP1Q92547 1522 aa24.97■■□□□ 1.59
SHANK1-203ENST00000391813 GZF1Q9H116 711 aaPredicted RBP24.95■■□□□ 1.58
SHANK1-203ENST00000391813 KIAA2012Q0VF49 1180 aa24.94■■□□□ 1.58
SHANK1-203ENST00000391813 FAM69CQ0P6D2 419 aa24.93■■□□□ 1.58
SHANK1-203ENST00000391813 MPHOSPH9Q99550 1183 aa24.93■■□□□ 1.58
SHANK1-203ENST00000391813 SPRYD3Q8NCJ5 442 aa24.93■■□□□ 1.58
SHANK1-203ENST00000391813 PDE4AP27815 886 aa24.92■■□□□ 1.58
SHANK1-203ENST00000391813 LAMC3Q9Y6N6 1575 aa24.92■■□□□ 1.58
SHANK1-203ENST00000391813 RWDD1Q9H446 243 aaPredicted RBP24.92■■□□□ 1.58
SHANK1-203ENST00000391813 DNAJC5BQ9UF47 199 aa24.91■■□□□ 1.58
SHANK1-203ENST00000391813 ZBED9Q6R2W3 1325 aa24.9■■□□□ 1.58
SHANK1-203ENST00000391813 SRPK2P78362 688 aaKnown RBP24.87■■□□□ 1.57
SHANK1-203ENST00000391813 PMFBP1Q8TBY8 1022 aa24.87■■□□□ 1.57
SHANK1-203ENST00000391813 POLA1P09884 1462 aaPredicted RBP24.85■■□□□ 1.57
SHANK1-203ENST00000391813 MCCP23508 829 aa24.84■■□□□ 1.57
SHANK1-203ENST00000391813 VSIG10Q8N0Z9 540 aa24.84■■□□□ 1.57
SHANK1-203ENST00000391813 GOLGA6L4A6NEF3 574 aa24.84■■□□□ 1.57
SHANK1-203ENST00000391813 ROCK2O75116 1388 aaKnown RBP24.84■■□□□ 1.57
SHANK1-203ENST00000391813 DNMBPQ6XZF7 1577 aa24.83■■□□□ 1.57
SHANK1-203ENST00000391813 TPRNQ4KMQ1 711 aa24.83■■□□□ 1.57
SHANK1-203ENST00000391813 NLRP13Q86W25 1043 aa24.83■■□□□ 1.57
SHANK1-203ENST00000391813 SYAP1Q96A49 352 aaPredicted RBP24.82■■□□□ 1.56
SHANK1-203ENST00000391813 PRG4Q92954 1404 aaPredicted RBP24.82■■□□□ 1.56
SHANK1-203ENST00000391813 FAM161AQ3B820 660 aa24.81■■□□□ 1.56
SHANK1-203ENST00000391813 DDX11L8A8MPP1 907 aa24.8■■□□□ 1.56
SHANK1-203ENST00000391813 IPO8O15397 1037 aaKnown RBP24.8■■□□□ 1.56
SHANK1-203ENST00000391813 CENPQQ7L2Z9 268 aaPredicted RBP24.8■■□□□ 1.56
SHANK1-203ENST00000391813 PHLDB1Q86UU1 1377 aa24.79■■□□□ 1.56
SHANK1-203ENST00000391813 STK26Q9P289 416 aa24.77■■□□□ 1.56
SHANK1-203ENST00000391813 HDGFL2Q7Z4V5 671 aaPredicted RBP24.77■■□□□ 1.56
SHANK1-203ENST00000391813 PRKRIP1Q9H875 184 aaPredicted RBP24.76■■□□□ 1.55
SHANK1-203ENST00000391813 GOLGA2Q08379 1002 aa24.76■■□□□ 1.55
SHANK1-203ENST00000391813 CALD1Q05682 793 aaKnown RBP24.76■■□□□ 1.55
SHANK1-203ENST00000391813 SYNJ2O15056 1496 aa24.76■■□□□ 1.55
SHANK1-203ENST00000391813 MYOM3Q5VTT5 1437 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms