RNA–Protein interactions for RNA: ENST00000390436.2

TRAV13-1-201, Transcript of T cell receptor alpha variable 13-1, humanhuman

APPRIS P1 BASIC

Gene TRAV13-1, Length 360 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1-201ENST00000390436 BCORL1Q5H9F3 1711 aa11.49□□□□□ -0.57
TRAV13-1-201ENST00000390436 PTPRMP28827 1452 aa11.48□□□□□ -0.57
TRAV13-1-201ENST00000390436 RAPGEF6Q8TEU7 1601 aa11.47□□□□□ -0.57
TRAV13-1-201ENST00000390436 GOLGA3Q08378 1498 aa11.47□□□□□ -0.57
TRAV13-1-201ENST00000390436 CAPN15O75808 1086 aa11.46□□□□□ -0.57
TRAV13-1-201ENST00000390436 RICTORQ6R327 1708 aa11.46□□□□□ -0.58
TRAV13-1-201ENST00000390436 NUP153P49790 1475 aaKnown RBP11.45□□□□□ -0.58
TRAV13-1-201ENST00000390436 RIMS1Q86UR5 1692 aaKnown RBP11.45□□□□□ -0.58
TRAV13-1-201ENST00000390436 LMTK3Q96Q04 1460 aa11.44□□□□□ -0.58
TRAV13-1-201ENST00000390436 TTC37Q6PGP7 1564 aa11.41□□□□□ -0.58
TRAV13-1-201ENST00000390436 FHOD3Q2V2M9 1422 aa11.41□□□□□ -0.58
TRAV13-1-201ENST00000390436 RANGAP1P46060 587 aaPredicted RBP11.4□□□□□ -0.58
TRAV13-1-201ENST00000390436 HSPA2P54652 639 aa11.4□□□□□ -0.58
TRAV13-1-201ENST00000390436 YEATS2Q9ULM3 1422 aa11.4□□□□□ -0.58
TRAV13-1-201ENST00000390436 PCF11O94913 1555 aaKnown RBP11.4□□□□□ -0.58
TRAV13-1-201ENST00000390436 FBXO41Q8TF61 875 aa11.39□□□□□ -0.59
TRAV13-1-201ENST00000390436 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.39□□□□□ -0.59
TRAV13-1-201ENST00000390436 ARHGEF40Q8TER5 1519 aa11.39□□□□□ -0.59
TRAV13-1-201ENST00000390436 NEO1Q92859 1461 aa11.38□□□□□ -0.59
TRAV13-1-201ENST00000390436 CDK13Q14004 1512 aaKnown RBP11.36□□□□□ -0.59
TRAV13-1-201ENST00000390436 LRRIQ1Q96JM4 1722 aa11.36□□□□□ -0.59
TRAV13-1-201ENST00000390436 AKNAQ7Z591 1439 aa11.35□□□□□ -0.59
TRAV13-1-201ENST00000390436 HECW1Q76N89 1606 aa11.34□□□□□ -0.59
TRAV13-1-201ENST00000390436 FER1L4A9Z1Z3 1794 aa11.33□□□□□ -0.6
TRAV13-1-201ENST00000390436 STRCQ7RTU9 1775 aa11.32□□□□□ -0.6
TRAV13-1-201ENST00000390436 ZMYM4Q5VZL5 1548 aa11.32□□□□□ -0.6
TRAV13-1-201ENST00000390436 POLA2Q14181 598 aa11.32□□□□□ -0.6
TRAV13-1-201ENST00000390436 ARID4BQ4LE39 1312 aaPredicted RBP11.32□□□□□ -0.6
TRAV13-1-201ENST00000390436 FANCAO15360 1455 aa11.32□□□□□ -0.6
TRAV13-1-201ENST00000390436 DENND4BO75064 1496 aaPredicted RBP11.32□□□□□ -0.6
TRAV13-1-201ENST00000390436 FAM9AQ8IZU1 332 aaPredicted RBP11.31□□□□□ -0.6
TRAV13-1-201ENST00000390436 PHLDB1Q86UU1 1377 aa11.3□□□□□ -0.6
TRAV13-1-201ENST00000390436 KIF14Q15058 1648 aa11.3□□□□□ -0.6
TRAV13-1-201ENST00000390436 CEBPAP49715 358 aaPredicted RBP11.29□□□□□ -0.6
TRAV13-1-201ENST00000390436 MLECQ14165 292 aa11.29□□□□□ -0.6
TRAV13-1-201ENST00000390436 ZFYVE16Q7Z3T8 1539 aa11.29□□□□□ -0.6
TRAV13-1-201ENST00000390436 FKBP8Q14318 412 aa11.28□□□□□ -0.6
TRAV13-1-201ENST00000390436 ABCB7O75027 752 aa11.27□□□□□ -0.61
TRAV13-1-201ENST00000390436 ARHGEF12Q9NZN5 1544 aa11.26□□□□□ -0.61
TRAV13-1-201ENST00000390436 DSG3P32926 999 aa11.26□□□□□ -0.61
TRAV13-1-201ENST00000390436 CACNB1Q02641 598 aaPredicted RBP11.26□□□□□ -0.61
TRAV13-1-201ENST00000390436 MKRN4PQ13434 485 aaPredicted RBP11.25□□□□□ -0.61
TRAV13-1-201ENST00000390436 ILDR2Q71H61 639 aa11.25□□□□□ -0.61
TRAV13-1-201ENST00000390436 SCAPERQ9BY12 1400 aa11.25□□□□□ -0.61
TRAV13-1-201ENST00000390436 MYO5CQ9NQX4 1742 aa11.24□□□□□ -0.61
TRAV13-1-201ENST00000390436 CDC42BPBQ9Y5S2 1711 aa11.24□□□□□ -0.61
TRAV13-1-201ENST00000390436 PLEKHD1A6NEE1 506 aa11.24□□□□□ -0.61
TRAV13-1-201ENST00000390436 POGZQ7Z3K3 1410 aa11.24□□□□□ -0.61
TRAV13-1-201ENST00000390436 CFAP74Q9C0B2 1584 aa11.24□□□□□ -0.61
TRAV13-1-201ENST00000390436 CERKQ8TCT0 537 aa11.23□□□□□ -0.61
TRAV13-1-201ENST00000390436 PLCH2O75038 1416 aa11.23□□□□□ -0.61
TRAV13-1-201ENST00000390436 ARHGAP35Q9NRY4 1499 aa11.23□□□□□ -0.61
TRAV13-1-201ENST00000390436 EFCAB5A4FU69 1503 aa11.23□□□□□ -0.61
TRAV13-1-201ENST00000390436 PREX1Q8TCU6 1659 aa11.23□□□□□ -0.61
TRAV13-1-201ENST00000390436 ABCA6Q8N139 1617 aa11.22□□□□□ -0.61
TRAV13-1-201ENST00000390436 C3P01024 1663 aa11.21□□□□□ -0.61
TRAV13-1-201ENST00000390436 DIP2CQ9Y2E4 1556 aa11.21□□□□□ -0.61
TRAV13-1-201ENST00000390436 AFAP1Q8N556 730 aa11.21□□□□□ -0.61
TRAV13-1-201ENST00000390436 ATP10AO60312 1499 aa11.2□□□□□ -0.62
TRAV13-1-201ENST00000390436 KDM5CP41229 1560 aa11.19□□□□□ -0.62
TRAV13-1-201ENST00000390436 MAGI2Q86UL8 1455 aa11.18□□□□□ -0.62
TRAV13-1-201ENST00000390436 KIDINS220Q9ULH0 1771 aa11.17□□□□□ -0.62
TRAV13-1-201ENST00000390436 SETD1BQ9UPS6 1966 aaKnown RBP11.17□□□□□ -0.62
TRAV13-1-201ENST00000390436 C9orf84Q5VXU9 1444 aa11.17□□□□□ -0.62
TRAV13-1-201ENST00000390436 TRAPPC8Q9Y2L5 1435 aa11.17□□□□□ -0.62
TRAV13-1-201ENST00000390436 CDC42BPAQ5VT25 1732 aa11.16□□□□□ -0.62
TRAV13-1-201ENST00000390436 LTBP4Q8N2S1 1624 aa11.16□□□□□ -0.62
TRAV13-1-201ENST00000390436 ITSN2Q9NZM3 1697 aa11.15□□□□□ -0.62
TRAV13-1-201ENST00000390436 ATP1B4Q9UN42 357 aaPredicted RBP11.14□□□□□ -0.63
TRAV13-1-201ENST00000390436 ZBTB12Q9Y330 459 aaPredicted RBP11.14□□□□□ -0.63
TRAV13-1-201ENST00000390436 EEA1Q15075 1411 aa11.14□□□□□ -0.63
TRAV13-1-201ENST00000390436 ARHGAP5Q13017 1502 aa11.13□□□□□ -0.63
TRAV13-1-201ENST00000390436 PREX2Q70Z35 1606 aa11.13□□□□□ -0.63
TRAV13-1-201ENST00000390436 TROQ12816 1431 aaPredicted RBP11.12□□□□□ -0.63
TRAV13-1-201ENST00000390436 ABCC1P33527 1531 aa11.11□□□□□ -0.63
TRAV13-1-201ENST00000390436 EFCAB2Q5VUJ9 269 aa11.11□□□□□ -0.63
TRAV13-1-201ENST00000390436 ZNF518AQ6AHZ1 1483 aa11.1□□□□□ -0.63
TRAV13-1-201ENST00000390436 REREQ9P2R6 1566 aa11.1□□□□□ -0.63
TRAV13-1-201ENST00000390436 SUPT6HQ7KZ85 1726 aaKnown RBP11.09□□□□□ -0.63
TRAV13-1-201ENST00000390436 SAMD9LQ8IVG5 1584 aa11.09□□□□□ -0.63
TRAV13-1-201ENST00000390436 MLH3Q9UHC1 1453 aa11.08□□□□□ -0.64
TRAV13-1-201ENST00000390436 DISP3Q9P2K9 1392 aa11.07□□□□□ -0.64
TRAV13-1-201ENST00000390436 UBTFP17480 764 aaKnown RBP11.07□□□□□ -0.64
TRAV13-1-201ENST00000390436 AGLP35573 1532 aa11.07□□□□□ -0.64
TRAV13-1-201ENST00000390436 UHRF1BP1Q6BDS2 1440 aa11.07□□□□□ -0.64
TRAV13-1-201ENST00000390436 CLTCQ00610 1675 aaKnown RBP11.06□□□□□ -0.64
TRAV13-1-201ENST00000390436 SPDYE4A6NLX3 237 aa11.06□□□□□ -0.64
TRAV13-1-201ENST00000390436 FMN1Q68DA7 1419 aa11.06□□□□□ -0.64
TRAV13-1-201ENST00000390436 NCOA1Q15788 1441 aa11.05□□□□□ -0.64
TRAV13-1-201ENST00000390436 CAMSAP1Q5T5Y3 1602 aa11.05□□□□□ -0.64
TRAV13-1-201ENST00000390436 SPATA31D1Q6ZQQ2 1576 aa11.04□□□□□ -0.64
TRAV13-1-201ENST00000390436 PTPRTO14522 1441 aa11.04□□□□□ -0.64
TRAV13-1-201ENST00000390436 NCKAP5LQ9HCH0 1330 aa11.04□□□□□ -0.64
TRAV13-1-201ENST00000390436 SYCP2Q9BX26 1530 aa11.04□□□□□ -0.64
TRAV13-1-201ENST00000390436 MROH2AA6NES4 1674 aa11.02□□□□□ -0.64
TRAV13-1-201ENST00000390436 HNRNPMP52272 730 aaKnown RBP eCLIP11.02□□□□□ -0.65
TRAV13-1-201ENST00000390436 GPATCH8Q9UKJ3 1502 aaKnown RBP11.02□□□□□ -0.65
TRAV13-1-201ENST00000390436 ZNF335Q9H4Z2 1342 aaPredicted RBP11.02□□□□□ -0.65
TRAV13-1-201ENST00000390436 CASKIN1Q8WXD9 1431 aa11.01□□□□□ -0.65
TRAV13-1-201ENST00000390436 SOCS7O14512 581 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms