RNA–Protein interactions for RNA: ENST00000390277.3

IGKV3D-11-201, Transcript of immunoglobulin kappa variable 3D-11, humanhuman

APPRIS P1 BASIC

Gene IGKV3D-11, Length 444 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-11-201ENST00000390277 RAPGEF6Q8TEU7 1601 aa13.6□□□□□ -0.23
IGKV3D-11-201ENST00000390277 LTBP4Q8N2S1 1624 aa13.58□□□□□ -0.24
IGKV3D-11-201ENST00000390277 HECW1Q76N89 1606 aa13.57□□□□□ -0.24
IGKV3D-11-201ENST00000390277 C9orf84Q5VXU9 1444 aa13.56□□□□□ -0.24
IGKV3D-11-201ENST00000390277 CEBPAP49715 358 aaPredicted RBP13.54□□□□□ -0.24
IGKV3D-11-201ENST00000390277 P3H3Q8IVL6 736 aa13.54□□□□□ -0.24
IGKV3D-11-201ENST00000390277 ATP10AO60312 1499 aa13.54□□□□□ -0.24
IGKV3D-11-201ENST00000390277 SETD1BQ9UPS6 1966 aaKnown RBP13.53□□□□□ -0.24
IGKV3D-11-201ENST00000390277 PLEKHD1A6NEE1 506 aa13.53□□□□□ -0.24
IGKV3D-11-201ENST00000390277 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.51□□□□□ -0.25
IGKV3D-11-201ENST00000390277 UBAP1LF5GYI3 381 aa13.51□□□□□ -0.25
IGKV3D-11-201ENST00000390277 MED1Q15648 1581 aaPredicted RBP13.49□□□□□ -0.25
IGKV3D-11-201ENST00000390277 NUP153P49790 1475 aaKnown RBP13.49□□□□□ -0.25
IGKV3D-11-201ENST00000390277 SAMD9Q5K651 1589 aa13.49□□□□□ -0.25
IGKV3D-11-201ENST00000390277 SCAPERQ9BY12 1400 aa13.48□□□□□ -0.25
IGKV3D-11-201ENST00000390277 ESF1Q9H501 851 aaKnown RBP13.48□□□□□ -0.25
IGKV3D-11-201ENST00000390277 NCOA1Q15788 1441 aa13.47□□□□□ -0.25
IGKV3D-11-201ENST00000390277 C3P01024 1663 aa13.47□□□□□ -0.25
IGKV3D-11-201ENST00000390277 PRXQ9BXM0 1461 aa13.46□□□□□ -0.25
IGKV3D-11-201ENST00000390277 PHF23Q9BUL5 403 aaPredicted RBP13.45□□□□□ -0.26
IGKV3D-11-201ENST00000390277 TRAPPC8Q9Y2L5 1435 aa13.45□□□□□ -0.26
IGKV3D-11-201ENST00000390277 ZNF518AQ6AHZ1 1483 aa13.43□□□□□ -0.26
IGKV3D-11-201ENST00000390277 CAMSAP1Q5T5Y3 1602 aa13.42□□□□□ -0.26
IGKV3D-11-201ENST00000390277 PLCH2O75038 1416 aa13.42□□□□□ -0.26
IGKV3D-11-201ENST00000390277 MYT1LQ9UL68 1186 aa13.42□□□□□ -0.26
IGKV3D-11-201ENST00000390277 SCAF1Q9H7N4 1312 aaKnown RBP13.41□□□□□ -0.26
IGKV3D-11-201ENST00000390277 REREQ9P2R6 1566 aa13.41□□□□□ -0.26
IGKV3D-11-201ENST00000390277 ZNF335Q9H4Z2 1342 aaPredicted RBP13.4□□□□□ -0.26
IGKV3D-11-201ENST00000390277 CNTLNQ9NXG0 1405 aa13.39□□□□□ -0.27
IGKV3D-11-201ENST00000390277 MYO5CQ9NQX4 1742 aa13.39□□□□□ -0.27
IGKV3D-11-201ENST00000390277 EFCAB2Q5VUJ9 269 aa13.38□□□□□ -0.27
IGKV3D-11-201ENST00000390277 AGLP35573 1532 aa13.38□□□□□ -0.27
IGKV3D-11-201ENST00000390277 KDM5CP41229 1560 aa13.37□□□□□ -0.27
IGKV3D-11-201ENST00000390277 DIP2CQ9Y2E4 1556 aa13.37□□□□□ -0.27
IGKV3D-11-201ENST00000390277 HSPA1LP34931 641 aa13.37□□□□□ -0.27
IGKV3D-11-201ENST00000390277 TOM1O60784 492 aa13.36□□□□□ -0.27
IGKV3D-11-201ENST00000390277 NPATQ14207 1427 aa13.36□□□□□ -0.27
IGKV3D-11-201ENST00000390277 PIP4K2BP78356 416 aa13.35□□□□□ -0.27
IGKV3D-11-201ENST00000390277 PKD2Q13563 968 aa13.35□□□□□ -0.27
IGKV3D-11-201ENST00000390277 SUPT6HQ7KZ85 1726 aaKnown RBP13.35□□□□□ -0.27
IGKV3D-11-201ENST00000390277 PLA2R1Q13018 1463 aa13.35□□□□□ -0.27
IGKV3D-11-201ENST00000390277 NCKAP5LQ9HCH0 1330 aa13.34□□□□□ -0.27
IGKV3D-11-201ENST00000390277 MROH2AA6NES4 1674 aa13.34□□□□□ -0.27
IGKV3D-11-201ENST00000390277 ABCA6Q8N139 1617 aa13.33□□□□□ -0.28
IGKV3D-11-201ENST00000390277 ARHGAP5Q13017 1502 aa13.32□□□□□ -0.28
IGKV3D-11-201ENST00000390277 ZNF142P52746 1687 aaPredicted RBP13.31□□□□□ -0.28
IGKV3D-11-201ENST00000390277 PPP6R1Q9UPN7 881 aa13.31□□□□□ -0.28
IGKV3D-11-201ENST00000390277 MLH3Q9UHC1 1453 aa13.3□□□□□ -0.28
IGKV3D-11-201ENST00000390277 CPS1P31327 1500 aa13.3□□□□□ -0.28
IGKV3D-11-201ENST00000390277 CDK13Q14004 1512 aaKnown RBP13.3□□□□□ -0.28
IGKV3D-11-201ENST00000390277 AFAP1Q8N556 730 aa13.3□□□□□ -0.28
IGKV3D-11-201ENST00000390277 MYO3AQ8NEV4 1616 aa13.3□□□□□ -0.28
IGKV3D-11-201ENST00000390277 KIF14Q15058 1648 aa13.29□□□□□ -0.28
IGKV3D-11-201ENST00000390277 RANGAP1P46060 587 aaPredicted RBP13.29□□□□□ -0.28
IGKV3D-11-201ENST00000390277 TCOF1Q13428 1488 aaKnown RBP13.29□□□□□ -0.28
IGKV3D-11-201ENST00000390277 CDK11AQ9UQ88 783 aaPredicted RBP13.28□□□□□ -0.28
IGKV3D-11-201ENST00000390277 CEP170BQ9Y4F5 1589 aaPredicted RBP13.28□□□□□ -0.28
IGKV3D-11-201ENST00000390277 PTPRKQ15262 1439 aa13.27□□□□□ -0.29
IGKV3D-11-201ENST00000390277 ZMYM3Q14202 1370 aa13.25□□□□□ -0.29
IGKV3D-11-201ENST00000390277 CLIP1P30622 1438 aa13.24□□□□□ -0.29
IGKV3D-11-201ENST00000390277 ATP1B4Q9UN42 357 aaPredicted RBP13.21□□□□□ -0.29
IGKV3D-11-201ENST00000390277 ABCC1P33527 1531 aa13.21□□□□□ -0.29
IGKV3D-11-201ENST00000390277 POLR1AO95602 1720 aaPredicted RBP13.21□□□□□ -0.3
IGKV3D-11-201ENST00000390277 SHANK2Q9UPX8 1470 aa13.21□□□□□ -0.3
IGKV3D-11-201ENST00000390277 CLTCQ00610 1675 aaKnown RBP13.21□□□□□ -0.3
IGKV3D-11-201ENST00000390277 ITSN2Q9NZM3 1697 aa13.21□□□□□ -0.3
IGKV3D-11-201ENST00000390277 KIDINS220Q9ULH0 1771 aa13.2□□□□□ -0.3
IGKV3D-11-201ENST00000390277 CSRNP3Q8WYN3 585 aa13.2□□□□□ -0.3
IGKV3D-11-201ENST00000390277 TROQ12816 1431 aaPredicted RBP13.19□□□□□ -0.3
IGKV3D-11-201ENST00000390277 CDC42BPBQ9Y5S2 1711 aa13.19□□□□□ -0.3
IGKV3D-11-201ENST00000390277 PREX2Q70Z35 1606 aa13.17□□□□□ -0.3
IGKV3D-11-201ENST00000390277 FMN1Q68DA7 1419 aa13.17□□□□□ -0.3
IGKV3D-11-201ENST00000390277 A2ML1A8K2U0 1454 aa13.16□□□□□ -0.3
IGKV3D-11-201ENST00000390277 DNMT1P26358 1616 aaKnown RBP13.16□□□□□ -0.3
IGKV3D-11-201ENST00000390277 SENP3Q9H4L4 574 aaPredicted RBP13.15□□□□□ -0.3
IGKV3D-11-201ENST00000390277 NEURL4Q96JN8 1562 aa13.14□□□□□ -0.31
IGKV3D-11-201ENST00000390277 RNF17Q9BXT8 1623 aaKnown RBP13.13□□□□□ -0.31
IGKV3D-11-201ENST00000390277 ALKQ9UM73 1620 aa13.13□□□□□ -0.31
IGKV3D-11-201ENST00000390277 SAMD9LQ8IVG5 1584 aa13.12□□□□□ -0.31
IGKV3D-11-201ENST00000390277 RGS17Q9UGC6 210 aaPredicted RBP13.11□□□□□ -0.31
IGKV3D-11-201ENST00000390277 EEA1Q15075 1411 aa13.11□□□□□ -0.31
IGKV3D-11-201ENST00000390277 SYNMO15061 1565 aa13.11□□□□□ -0.31
IGKV3D-11-201ENST00000390277 VWDEQ8N2E2 1590 aa13.11□□□□□ -0.31
IGKV3D-11-201ENST00000390277 SPAG9O60271 1321 aaKnown RBP13.11□□□□□ -0.31
IGKV3D-11-201ENST00000390277 GGT6Q6P531 493 aa13.1□□□□□ -0.31
IGKV3D-11-201ENST00000390277 PLXNC1O60486 1568 aa13.1□□□□□ -0.31
IGKV3D-11-201ENST00000390277 ANKLE2Q86XL3 938 aa13.09□□□□□ -0.31
IGKV3D-11-201ENST00000390277 A2MP01023 1474 aa13.09□□□□□ -0.31
IGKV3D-11-201ENST00000390277 ATP7AQ04656 1500 aa13.08□□□□□ -0.31
IGKV3D-11-201ENST00000390277 DEPDC5O75140 1603 aa13.07□□□□□ -0.32
IGKV3D-11-201ENST00000390277 NPHP4O75161 1426 aaPredicted RBP13.06□□□□□ -0.32
IGKV3D-11-201ENST00000390277 SYCP2Q9BX26 1530 aa13.06□□□□□ -0.32
IGKV3D-11-201ENST00000390277 TNRQ92752 1358 aa13.06□□□□□ -0.32
IGKV3D-11-201ENST00000390277 IQGAP1P46940 1657 aa13.05□□□□□ -0.32
IGKV3D-11-201ENST00000390277 CDC42BPAQ5VT25 1732 aa13.05□□□□□ -0.32
IGKV3D-11-201ENST00000390277 MED14O60244 1454 aa13.05□□□□□ -0.32
IGKV3D-11-201ENST00000390277 LRRC7Q96NW7 1537 aa13.05□□□□□ -0.32
IGKV3D-11-201ENST00000390277 THEMISQ8N1K5 641 aaPredicted RBP13.05□□□□□ -0.32
IGKV3D-11-201ENST00000390277 INO80Q9ULG1 1556 aaPredicted RBP13.05□□□□□ -0.32
IGKV3D-11-201ENST00000390277 FAM135AQ9P2D6 1515 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms