RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 PREX1Q8TCU6 1659 aa20■□□□□ 0.79
SOD1-202ENST00000389995 STRCQ7RTU9 1775 aa19.98■□□□□ 0.79
SOD1-202ENST00000389995 SCAPERQ9BY12 1400 aa19.96■□□□□ 0.79
SOD1-202ENST00000389995 CEBPAP49715 358 aaPredicted RBP19.96■□□□□ 0.79
SOD1-202ENST00000389995 MAGI2Q86UL8 1455 aa19.95■□□□□ 0.78
SOD1-202ENST00000389995 MYO5CQ9NQX4 1742 aa19.95■□□□□ 0.78
SOD1-202ENST00000389995 ARHGEF12Q9NZN5 1544 aa19.94■□□□□ 0.78
SOD1-202ENST00000389995 ILDR2Q71H61 639 aa19.94■□□□□ 0.78
SOD1-202ENST00000389995 PLCH2O75038 1416 aa19.91■□□□□ 0.78
SOD1-202ENST00000389995 ATP10AO60312 1499 aa19.91■□□□□ 0.78
SOD1-202ENST00000389995 DISP3Q9P2K9 1392 aa19.9■□□□□ 0.78
SOD1-202ENST00000389995 SETD1BQ9UPS6 1966 aaKnown RBP19.9■□□□□ 0.78
SOD1-202ENST00000389995 KIF14Q15058 1648 aa19.88■□□□□ 0.77
SOD1-202ENST00000389995 C9orf84Q5VXU9 1444 aa19.88■□□□□ 0.77
SOD1-202ENST00000389995 ATP1B4Q9UN42 357 aaPredicted RBP19.88■□□□□ 0.77
SOD1-202ENST00000389995 EHMT2Q96KQ7 1210 aa19.87■□□□□ 0.77
SOD1-202ENST00000389995 C3P01024 1663 aa19.84■□□□□ 0.77
SOD1-202ENST00000389995 LRRIQ1Q96JM4 1722 aa19.83■□□□□ 0.77
SOD1-202ENST00000389995 EFCAB2Q5VUJ9 269 aa19.82■□□□□ 0.76
SOD1-202ENST00000389995 AFAP1Q8N556 730 aa19.82■□□□□ 0.76
SOD1-202ENST00000389995 EEA1Q15075 1411 aa19.82■□□□□ 0.76
SOD1-202ENST00000389995 CDC42BPBQ9Y5S2 1711 aa19.8■□□□□ 0.76
SOD1-202ENST00000389995 DIP2CQ9Y2E4 1556 aa19.8■□□□□ 0.76
SOD1-202ENST00000389995 UHRF1BP1Q6BDS2 1440 aa19.8■□□□□ 0.76
SOD1-202ENST00000389995 MYT1LQ9UL68 1186 aa19.8■□□□□ 0.76
SOD1-202ENST00000389995 ARHGAP5Q13017 1502 aa19.8■□□□□ 0.76
SOD1-202ENST00000389995 ABCA6Q8N139 1617 aa19.79■□□□□ 0.76
SOD1-202ENST00000389995 KDM5CP41229 1560 aa19.78■□□□□ 0.76
SOD1-202ENST00000389995 SOCS7O14512 581 aa19.78■□□□□ 0.76
SOD1-202ENST00000389995 ZNF518AQ6AHZ1 1483 aa19.78■□□□□ 0.76
SOD1-202ENST00000389995 SPATA31D1Q6ZQQ2 1576 aa19.78■□□□□ 0.76
SOD1-202ENST00000389995 DMRT2Q9Y5R5 561 aa19.77■□□□□ 0.76
SOD1-202ENST00000389995 LTBP4Q8N2S1 1624 aa19.72■□□□□ 0.75
SOD1-202ENST00000389995 ARHGAP35Q9NRY4 1499 aa19.72■□□□□ 0.75
SOD1-202ENST00000389995 REREQ9P2R6 1566 aa19.7■□□□□ 0.74
SOD1-202ENST00000389995 TROQ12816 1431 aaPredicted RBP19.7■□□□□ 0.74
SOD1-202ENST00000389995 FMN1Q68DA7 1419 aa19.7■□□□□ 0.74
SOD1-202ENST00000389995 UBTFP17480 764 aaKnown RBP19.7■□□□□ 0.74
SOD1-202ENST00000389995 ITSN2Q9NZM3 1697 aa19.7■□□□□ 0.74
SOD1-202ENST00000389995 PTPRTO14522 1441 aa19.69■□□□□ 0.74
SOD1-202ENST00000389995 CDK11AQ9UQ88 783 aaPredicted RBP19.69■□□□□ 0.74
SOD1-202ENST00000389995 TRAPPC8Q9Y2L5 1435 aa19.68■□□□□ 0.74
SOD1-202ENST00000389995 KIDINS220Q9ULH0 1771 aa19.68■□□□□ 0.74
SOD1-202ENST00000389995 PREX2Q70Z35 1606 aa19.68■□□□□ 0.74
SOD1-202ENST00000389995 MLH3Q9UHC1 1453 aa19.66■□□□□ 0.74
SOD1-202ENST00000389995 ABCC1P33527 1531 aa19.66■□□□□ 0.74
SOD1-202ENST00000389995 CDC42BPAQ5VT25 1732 aa19.65■□□□□ 0.74
SOD1-202ENST00000389995 ESF1Q9H501 851 aaKnown RBP19.65■□□□□ 0.74
SOD1-202ENST00000389995 CLIP1P30622 1438 aa19.65■□□□□ 0.74
SOD1-202ENST00000389995 AGLP35573 1532 aa19.64■□□□□ 0.73
SOD1-202ENST00000389995 SUPT6HQ7KZ85 1726 aaKnown RBP19.63■□□□□ 0.73
SOD1-202ENST00000389995 CAMSAP1Q5T5Y3 1602 aa19.63■□□□□ 0.73
SOD1-202ENST00000389995 NCOA1Q15788 1441 aa19.63■□□□□ 0.73
SOD1-202ENST00000389995 MROH2AA6NES4 1674 aa19.59■□□□□ 0.73
SOD1-202ENST00000389995 CLTCQ00610 1675 aaKnown RBP19.59■□□□□ 0.73
SOD1-202ENST00000389995 NCKAP5LQ9HCH0 1330 aa19.58■□□□□ 0.73
SOD1-202ENST00000389995 IQSEC2Q5JU85 1478 aa19.56■□□□□ 0.72
SOD1-202ENST00000389995 SAMD9LQ8IVG5 1584 aa19.56■□□□□ 0.72
SOD1-202ENST00000389995 ZNF335Q9H4Z2 1342 aaPredicted RBP19.55■□□□□ 0.72
SOD1-202ENST00000389995 CNTLNQ9NXG0 1405 aa19.55■□□□□ 0.72
SOD1-202ENST00000389995 ZNF777Q9ULD5 760 aaPredicted RBP19.54■□□□□ 0.72
SOD1-202ENST00000389995 MYO3AQ8NEV4 1616 aa19.53■□□□□ 0.72
SOD1-202ENST00000389995 SYCP2Q9BX26 1530 aa19.52■□□□□ 0.72
SOD1-202ENST00000389995 UBAP1LF5GYI3 381 aa19.52■□□□□ 0.72
SOD1-202ENST00000389995 ZMYM3Q14202 1370 aa19.52■□□□□ 0.72
SOD1-202ENST00000389995 ZNF142P52746 1687 aaPredicted RBP19.51■□□□□ 0.71
SOD1-202ENST00000389995 NPATQ14207 1427 aa19.51■□□□□ 0.71
SOD1-202ENST00000389995 HNRNPMP52272 730 aaKnown RBP eCLIP19.49■□□□□ 0.71
SOD1-202ENST00000389995 CCDC18Q5T9S5 1454 aa19.48■□□□□ 0.71
SOD1-202ENST00000389995 CASKIN1Q8WXD9 1431 aa19.48■□□□□ 0.71
SOD1-202ENST00000389995 CEP170BQ9Y4F5 1589 aaPredicted RBP19.47■□□□□ 0.71
SOD1-202ENST00000389995 SPAG9O60271 1321 aaKnown RBP19.47■□□□□ 0.71
SOD1-202ENST00000389995 ATP7AQ04656 1500 aa19.46■□□□□ 0.71
SOD1-202ENST00000389995 INO80Q9ULG1 1556 aaPredicted RBP19.44■□□□□ 0.7
SOD1-202ENST00000389995 PLXNC1O60486 1568 aa19.44■□□□□ 0.7
SOD1-202ENST00000389995 PTPRKQ15262 1439 aa19.43■□□□□ 0.7
SOD1-202ENST00000389995 GPATCH8Q9UKJ3 1502 aaKnown RBP19.43■□□□□ 0.7
SOD1-202ENST00000389995 GGT6Q6P531 493 aa19.43■□□□□ 0.7
SOD1-202ENST00000389995 TCOF1Q13428 1488 aaKnown RBP19.41■□□□□ 0.7
SOD1-202ENST00000389995 A2MP01023 1474 aa19.41■□□□□ 0.7
SOD1-202ENST00000389995 PLA2R1Q13018 1463 aa19.41■□□□□ 0.7
SOD1-202ENST00000389995 POLR1AO95602 1720 aaPredicted RBP19.39■□□□□ 0.7
SOD1-202ENST00000389995 PKD2Q13563 968 aa19.39■□□□□ 0.69
SOD1-202ENST00000389995 SCAF1Q9H7N4 1312 aaKnown RBP19.39■□□□□ 0.69
SOD1-202ENST00000389995 ADGBQ8N7X0 1667 aa19.39■□□□□ 0.69
SOD1-202ENST00000389995 DNMT1P26358 1616 aaKnown RBP19.38■□□□□ 0.69
SOD1-202ENST00000389995 FYCO1Q9BQS8 1478 aa19.38■□□□□ 0.69
SOD1-202ENST00000389995 PIP4K2BP78356 416 aa19.37■□□□□ 0.69
SOD1-202ENST00000389995 PPP6R1Q9UPN7 881 aa19.37■□□□□ 0.69
SOD1-202ENST00000389995 MED1Q15648 1581 aaPredicted RBP19.36■□□□□ 0.69
SOD1-202ENST00000389995 HSPA1LP34931 641 aa19.36■□□□□ 0.69
SOD1-202ENST00000389995 CFDP1Q9UEE9 299 aaPredicted RBP19.35■□□□□ 0.69
SOD1-202ENST00000389995 KIAA1107Q9UPP5 1409 aa19.33■□□□□ 0.68
SOD1-202ENST00000389995 NEURL4Q96JN8 1562 aa19.32■□□□□ 0.68
SOD1-202ENST00000389995 ZNF644Q9H582 1327 aaPredicted RBP19.32■□□□□ 0.68
SOD1-202ENST00000389995 A2ML1A8K2U0 1454 aa19.32■□□□□ 0.68
SOD1-202ENST00000389995 PLEKHH2Q8IVE3 1493 aa19.31■□□□□ 0.68
SOD1-202ENST00000389995 CCNB3Q8WWL7 1395 aa19.31■□□□□ 0.68
SOD1-202ENST00000389995 FBXO31Q5XUX0 539 aaPredicted RBP19.3■□□□□ 0.68
SOD1-202ENST00000389995 TIAM1Q13009 1591 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms