RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 TIAM1Q13009 1591 aa25.58■■□□□ 1.69
PPFIA1-202ENST00000389547 ESF1Q9H501 851 aaKnown RBP25.58■■□□□ 1.69
PPFIA1-202ENST00000389547 IQGAP2Q13576 1575 aa25.56■■□□□ 1.68
PPFIA1-202ENST00000389547 RRBP1Q9P2E9 1410 aaKnown RBP25.56■■□□□ 1.68
PPFIA1-202ENST00000389547 NUP155O75694 1391 aa25.55■■□□□ 1.68
PPFIA1-202ENST00000389547 SYNJ2O15056 1496 aa25.55■■□□□ 1.68
PPFIA1-202ENST00000389547 PCF11O94913 1555 aaKnown RBP25.55■■□□□ 1.68
PPFIA1-202ENST00000389547 CDK13Q14004 1512 aaKnown RBP25.54■■□□□ 1.68
PPFIA1-202ENST00000389547 STAG3Q9UJ98 1225 aa25.54■■□□□ 1.68
PPFIA1-202ENST00000389547 ANKRD30AQ9BXX3 1397 aa25.52■■□□□ 1.68
PPFIA1-202ENST00000389547 PLB1Q6P1J6 1458 aa25.5■■□□□ 1.67
PPFIA1-202ENST00000389547 CCDC136Q96JN2 1154 aa25.5■■□□□ 1.67
PPFIA1-202ENST00000389547 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.49■■□□□ 1.67
PPFIA1-202ENST00000389547 DCAF11Q8TEB1 546 aa25.48■■□□□ 1.67
PPFIA1-202ENST00000389547 GGT6Q6P531 493 aa25.48■■□□□ 1.67
PPFIA1-202ENST00000389547 MAGI1Q96QZ7 1491 aaPredicted RBP25.48■■□□□ 1.67
PPFIA1-202ENST00000389547 PPP1R15AO75807 674 aaPredicted RBP25.46■■□□□ 1.67
PPFIA1-202ENST00000389547 NOP58Q9Y2X3 529 aaKnown RBP25.46■■□□□ 1.67
PPFIA1-202ENST00000389547 L3MBTL2Q969R5 705 aa25.44■■□□□ 1.66
PPFIA1-202ENST00000389547 EPRSP07814 1512 aaKnown RBP25.44■■□□□ 1.66
PPFIA1-202ENST00000389547 CARD11Q9BXL7 1154 aa25.42■■□□□ 1.66
PPFIA1-202ENST00000389547 SPAG9O60271 1321 aaKnown RBP25.4■■□□□ 1.66
PPFIA1-202ENST00000389547 KIF3BO15066 747 aa25.4■■□□□ 1.66
PPFIA1-202ENST00000389547 ANO8Q9HCE9 1232 aaPredicted RBP25.4■■□□□ 1.66
PPFIA1-202ENST00000389547 TIMELESSQ9UNS1 1208 aa25.39■■□□□ 1.66
PPFIA1-202ENST00000389547 MLECQ14165 292 aa25.39■■□□□ 1.65
PPFIA1-202ENST00000389547 FAM9BQ8IZU0 186 aa25.39■■□□□ 1.65
PPFIA1-202ENST00000389547 ARID4BQ4LE39 1312 aaPredicted RBP25.34■■□□□ 1.65
PPFIA1-202ENST00000389547 RSPH4AQ5TD94 716 aa25.34■■□□□ 1.65
PPFIA1-202ENST00000389547 B4GALNT3Q6L9W6 998 aa25.34■■□□□ 1.65
PPFIA1-202ENST00000389547 TROQ12816 1431 aaPredicted RBP25.34■■□□□ 1.65
PPFIA1-202ENST00000389547 AFAP1Q8N556 730 aa25.33■■□□□ 1.64
PPFIA1-202ENST00000389547 SENP3-EIF4A1A0A087X0R7 540 aa25.32■■□□□ 1.64
PPFIA1-202ENST00000389547 TRHP20396 242 aaPredicted RBP25.32■■□□□ 1.64
PPFIA1-202ENST00000389547 HSPA5P11021 654 aaKnown RBP25.31■■□□□ 1.64
PPFIA1-202ENST00000389547 WDR62O43379 1518 aa25.31■■□□□ 1.64
PPFIA1-202ENST00000389547 HECW1Q76N89 1606 aa25.29■■□□□ 1.64
PPFIA1-202ENST00000389547 EHBP1L1Q8N3D4 1523 aa25.29■■□□□ 1.64
PPFIA1-202ENST00000389547 EIF4G3O43432 1585 aaKnown RBP25.27■■□□□ 1.64
PPFIA1-202ENST00000389547 PPP4R2Q9NY27 417 aa25.26■■□□□ 1.63
PPFIA1-202ENST00000389547 SALL2Q9Y467 1007 aaPredicted RBP25.25■■□□□ 1.63
PPFIA1-202ENST00000389547 ADAMTS12P58397 1594 aa25.25■■□□□ 1.63
PPFIA1-202ENST00000389547 MRS2Q9HD23 443 aa25.25■■□□□ 1.63
PPFIA1-202ENST00000389547 ABCA5Q8WWZ7 1642 aa25.24■■□□□ 1.63
PPFIA1-202ENST00000389547 LAS1LQ9Y4W2 734 aaKnown RBP25.24■■□□□ 1.63
PPFIA1-202ENST00000389547 UACAQ9BZF9 1416 aa25.22■■□□□ 1.63
PPFIA1-202ENST00000389547 KIF15Q9NS87 1388 aa25.22■■□□□ 1.63
PPFIA1-202ENST00000389547 TARBP1Q13395 1621 aaKnown RBP25.22■■□□□ 1.63
PPFIA1-202ENST00000389547 FANCIQ9NVI1 1328 aa25.19■■□□□ 1.62
PPFIA1-202ENST00000389547 MAP3K1Q13233 1512 aa25.19■■□□□ 1.62
PPFIA1-202ENST00000389547 GLIPR1L2Q4G1C9 344 aa25.18■■□□□ 1.62
PPFIA1-202ENST00000389547 KANK1Q14678 1352 aa25.18■■□□□ 1.62
PPFIA1-202ENST00000389547 NEFMP07197 916 aa25.17■■□□□ 1.62
PPFIA1-202ENST00000389547 ARHGEF11O15085 1522 aa25.17■■□□□ 1.62
PPFIA1-202ENST00000389547 TMC1Q8TDI8 760 aa25.17■■□□□ 1.62
PPFIA1-202ENST00000389547 MIA2Q96PC5 1412 aa25.17■■□□□ 1.62
PPFIA1-202ENST00000389547 ANKRD50Q9ULJ7 1429 aa25.17■■□□□ 1.62
PPFIA1-202ENST00000389547 SUPT6HQ7KZ85 1726 aaKnown RBP25.16■■□□□ 1.62
PPFIA1-202ENST00000389547 CTTNBP2Q8WZ74 1663 aa25.16■■□□□ 1.62
PPFIA1-202ENST00000389547 THOC2Q8NI27 1593 aaKnown RBP25.15■■□□□ 1.62
PPFIA1-202ENST00000389547 MSH5O43196 834 aa25.15■■□□□ 1.62
PPFIA1-202ENST00000389547 FAM69CQ0P6D2 419 aa25.14■■□□□ 1.61
PPFIA1-202ENST00000389547 ARHGAP5Q13017 1502 aa25.13■■□□□ 1.61
PPFIA1-202ENST00000389547 NAIPQ13075 1403 aa25.13■■□□□ 1.61
PPFIA1-202ENST00000389547 HFM1A2PYH4 1435 aa25.13■■□□□ 1.61
PPFIA1-202ENST00000389547 NUP153P49790 1475 aaKnown RBP25.1■■□□□ 1.61
PPFIA1-202ENST00000389547 ERICH6BQ5W0A0 696 aa25.1■■□□□ 1.61
PPFIA1-202ENST00000389547 NUTM2DQ5VT03 806 aaPredicted RBP25.09■■□□□ 1.61
PPFIA1-202ENST00000389547 DAPK1P53355 1430 aa25.08■■□□□ 1.61
PPFIA1-202ENST00000389547 PBRM1Q86U86 1689 aa25.08■■□□□ 1.61
PPFIA1-202ENST00000389547 WASHC2CQ9Y4E1 1318 aa25.08■■□□□ 1.6
PPFIA1-202ENST00000389547 PTPRKQ15262 1439 aa25.07■■□□□ 1.6
PPFIA1-202ENST00000389547 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.05■■□□□ 1.61e-6■■□□□ 13.1
PPFIA1-202ENST00000389547 UGGT2Q9NYU1 1516 aa25.05■■□□□ 1.6
PPFIA1-202ENST00000389547 DISP1Q96F81 1524 aa25.04■■□□□ 1.6
PPFIA1-202ENST00000389547 C9orf84Q5VXU9 1444 aa25.04■■□□□ 1.6
PPFIA1-202ENST00000389547 ATP10BO94823 1461 aa25.03■■□□□ 1.6
PPFIA1-202ENST00000389547 CCER2I3L3R5 266 aa25.03■■□□□ 1.6
PPFIA1-202ENST00000389547 SAFB2Q14151 953 aaKnown RBP eCLIP25.02■■□□□ 1.6
PPFIA1-202ENST00000389547 ABCC5O15440 1437 aa25.01■■□□□ 1.59
PPFIA1-202ENST00000389547 ARXQ96QS3 562 aa25.01■■□□□ 1.59
PPFIA1-202ENST00000389547 PTPN23Q9H3S7 1636 aa25■■□□□ 1.59
PPFIA1-202ENST00000389547 NUP160Q12769 1436 aa25■■□□□ 1.59
PPFIA1-202ENST00000389547 ROCK2O75116 1388 aaKnown RBP25■■□□□ 1.59
PPFIA1-202ENST00000389547 KIAA0556O60303 1618 aa24.99■■□□□ 1.59
PPFIA1-202ENST00000389547 RAPGEF3O95398 923 aa24.99■■□□□ 1.59
PPFIA1-202ENST00000389547 CCDC144AA2RUR9 1427 aa24.99■■□□□ 1.59
PPFIA1-202ENST00000389547 ST20-MTHFSA0A0A6YYL1 179 aa24.96■■□□□ 1.59
PPFIA1-202ENST00000389547 SCAPERQ9BY12 1400 aa24.95■■□□□ 1.59
PPFIA1-202ENST00000389547 RAPGEF6Q8TEU7 1601 aa24.95■■□□□ 1.58
PPFIA1-202ENST00000389547 CC2D1BQ5T0F9 858 aaKnown RBP24.95■■□□□ 1.58
PPFIA1-202ENST00000389547 CAMSAP2Q08AD1 1489 aa24.94■■□□□ 1.58
PPFIA1-202ENST00000389547 STK26Q9P289 416 aa24.94■■□□□ 1.58
PPFIA1-202ENST00000389547 IL27Q8NEV9 243 aa24.93■■□□□ 1.58
PPFIA1-202ENST00000389547 GPATCH8Q9UKJ3 1502 aaKnown RBP24.92■■□□□ 1.58
PPFIA1-202ENST00000389547 CEP170Q5SW79 1584 aa24.91■■□□□ 1.58
PPFIA1-202ENST00000389547 PPM1GO15355 546 aaPredicted RBP24.91■■□□□ 1.58
PPFIA1-202ENST00000389547 NBPF8Q3BBV2 869 aa24.89■■□□□ 1.58
PPFIA1-202ENST00000389547 IPO9Q96P70 1041 aaKnown RBP24.89■■□□□ 1.57
PPFIA1-202ENST00000389547 KNSTRNQ9Y448 316 aa24.89■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms