RNA–Protein interactions for RNA: ENST00000383831.7

CPNE9-202, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-202ENST00000383831 NAIPQ13075 1403 aa30.1■■■□□ 2.41
CPNE9-202ENST00000383831 PREX2Q70Z35 1606 aa30.1■■■□□ 2.41
CPNE9-202ENST00000383831 ZNF777Q9ULD5 760 aaPredicted RBP30.09■■■□□ 2.41
CPNE9-202ENST00000383831 CHIC2Q9UKJ5 165 aa30.08■■■□□ 2.41
CPNE9-202ENST00000383831 AKNAQ7Z591 1439 aa30.07■■■□□ 2.4
CPNE9-202ENST00000383831 CDC42BPBQ9Y5S2 1711 aa30.07■■■□□ 2.4
CPNE9-202ENST00000383831 GCC2Q8IWJ2 1684 aa30.06■■■□□ 2.4
CPNE9-202ENST00000383831 KCNH8Q96L42 1107 aa30.05■■■□□ 2.4
CPNE9-202ENST00000383831 CLSPNQ9HAW4 1339 aa30.05■■■□□ 2.4
CPNE9-202ENST00000383831 MYO5CQ9NQX4 1742 aa30.02■■■□□ 2.4
CPNE9-202ENST00000383831 RRP7BPQ9NSQ0 103 aa30.02■■■□□ 2.4
CPNE9-202ENST00000383831 CROCC2H7BZ55 1655 aa30.01■■■□□ 2.4
CPNE9-202ENST00000383831 WDR7Q9Y4E6 1490 aa30■■■□□ 2.39
CPNE9-202ENST00000383831 ROCK1Q13464 1354 aa30■■■□□ 2.39
CPNE9-202ENST00000383831 SAMD9LQ8IVG5 1584 aa29.99■■■□□ 2.39
CPNE9-202ENST00000383831 ARHGAP5Q13017 1502 aa29.96■■■□□ 2.39
CPNE9-202ENST00000383831 MAPKBP1O60336 1514 aa29.95■■■□□ 2.38
CPNE9-202ENST00000383831 ADGBQ8N7X0 1667 aa29.94■■■□□ 2.38
CPNE9-202ENST00000383831 ASXL2Q76L83 1435 aa29.92■■■□□ 2.38
CPNE9-202ENST00000383831 KDM6BO15054 1643 aa29.92■■■□□ 2.38
CPNE9-202ENST00000383831 ARHGEF5Q12774 1597 aa29.92■■■□□ 2.38
CPNE9-202ENST00000383831 PLCH2O75038 1416 aa29.9■■■□□ 2.38
CPNE9-202ENST00000383831 ADGRL2O95490 1459 aa29.9■■■□□ 2.38
CPNE9-202ENST00000383831 MBD5Q9P267 1494 aa29.9■■■□□ 2.38
CPNE9-202ENST00000383831 SHANK2Q9UPX8 1470 aa29.89■■■□□ 2.38
CPNE9-202ENST00000383831 RIMBP3CA6NJZ7 1639 aa29.89■■■□□ 2.38
CPNE9-202ENST00000383831 RIMBP3BA6NNM3 1639 aa29.89■■■□□ 2.38
CPNE9-202ENST00000383831 RIMBP3Q9UFD9 1639 aa29.89■■■□□ 2.38
CPNE9-202ENST00000383831 NPM1P06748 294 aaKnown RBP eCLIP29.87■■■□□ 2.37
CPNE9-202ENST00000383831 HNRNPMP52272 730 aaKnown RBP eCLIP29.87■■■□□ 2.37
CPNE9-202ENST00000383831 NCOA1Q15788 1441 aa29.85■■■□□ 2.37
CPNE9-202ENST00000383831 SYCP2Q9BX26 1530 aa29.85■■■□□ 2.37
CPNE9-202ENST00000383831 ABCA9Q8IUA7 1624 aa29.84■■■□□ 2.37
CPNE9-202ENST00000383831 C9orf84Q5VXU9 1444 aa29.83■■■□□ 2.37
CPNE9-202ENST00000383831 CCDC141Q6ZP82 1450 aa29.83■■■□□ 2.37
CPNE9-202ENST00000383831 ARAP3Q8WWN8 1544 aa29.82■■■□□ 2.36
CPNE9-202ENST00000383831 PLEKHH2Q8IVE3 1493 aa29.81■■■□□ 2.36
CPNE9-202ENST00000383831 ANKRD30AQ9BXX3 1397 aa29.81■■■□□ 2.36
CPNE9-202ENST00000383831 KIAA1107Q9UPP5 1409 aa29.79■■■□□ 2.36
CPNE9-202ENST00000383831 EFCAB2Q5VUJ9 269 aa29.78■■■□□ 2.36
CPNE9-202ENST00000383831 RSPH4AQ5TD94 716 aa29.77■■■□□ 2.36
CPNE9-202ENST00000383831 TSPY4P0CV99 314 aa29.77■■■□□ 2.36
CPNE9-202ENST00000383831 TSPY10P0CW01 314 aa29.77■■■□□ 2.36
CPNE9-202ENST00000383831 ARHGEF12Q9NZN5 1544 aa29.75■■■□□ 2.35
CPNE9-202ENST00000383831 ABCC1P33527 1531 aa29.75■■■□□ 2.35
CPNE9-202ENST00000383831 CYB5RLQ6IPT4 315 aa29.75■■■□□ 2.35
CPNE9-202ENST00000383831 TRIM52Q96A61 297 aa29.72■■■□□ 2.35
CPNE9-202ENST00000383831 MAST1Q9Y2H9 1570 aa29.71■■■□□ 2.35
CPNE9-202ENST00000383831 ACIN1Q9UKV3 1341 aaKnown RBP29.69■■■□□ 2.34
CPNE9-202ENST00000383831 FANCAO15360 1455 aa29.67■■■□□ 2.34
CPNE9-202ENST00000383831 DENND4BO75064 1496 aaPredicted RBP29.66■■■□□ 2.34
CPNE9-202ENST00000383831 ANKRD50Q9ULJ7 1429 aa29.66■■■□□ 2.34
CPNE9-202ENST00000383831 KIF15Q9NS87 1388 aa29.65■■■□□ 2.34
CPNE9-202ENST00000383831 SIN3AQ96ST3 1273 aa29.64■■■□□ 2.34
CPNE9-202ENST00000383831 TRAPPC8Q9Y2L5 1435 aa29.62■■■□□ 2.33
CPNE9-202ENST00000383831 MPHOSPH9Q99550 1183 aa29.61■■■□□ 2.33
CPNE9-202ENST00000383831 PLXNC1O60486 1568 aa29.6■■■□□ 2.33
CPNE9-202ENST00000383831 NEUROD1Q13562 356 aa29.57■■■□□ 2.32
CPNE9-202ENST00000383831 CD109Q6YHK3 1445 aa29.56■■■□□ 2.32
CPNE9-202ENST00000383831 PZPP20742 1482 aa29.55■■■□□ 2.32
CPNE9-202ENST00000383831 ADGRL1O94910 1474 aa29.54■■■□□ 2.32
CPNE9-202ENST00000383831 CFAP74Q9C0B2 1584 aa29.5■■■□□ 2.31
CPNE9-202ENST00000383831 SCAPERQ9BY12 1400 aa29.5■■■□□ 2.31
CPNE9-202ENST00000383831 AFAP1Q8N556 730 aa29.49■■■□□ 2.31
CPNE9-202ENST00000383831 SLC4A1APQ9BWU0 796 aaKnown RBP29.49■■■□□ 2.31
CPNE9-202ENST00000383831 ZFYVE16Q7Z3T8 1539 aa29.48■■■□□ 2.31
CPNE9-202ENST00000383831 TIMELESSQ9UNS1 1208 aa29.47■■■□□ 2.31
CPNE9-202ENST00000383831 KDM5DQ9BY66 1539 aa29.47■■■□□ 2.31
CPNE9-202ENST00000383831 DUOX2Q9NRD8 1548 aa29.47■■■□□ 2.31
CPNE9-202ENST00000383831 RTEL1-TNFRSF6BF6WH68 1400 aa29.47■■■□□ 2.31
CPNE9-202ENST00000383831 SPAG9O60271 1321 aaKnown RBP29.47■■■□□ 2.31
CPNE9-202ENST00000383831 FOXD1Q16676 465 aa29.45■■■□□ 2.31
CPNE9-202ENST00000383831 GLI2P10070 1586 aa29.44■■■□□ 2.3
CPNE9-202ENST00000383831 MAP3K4Q9Y6R4 1608 aa29.44■■■□□ 2.3
CPNE9-202ENST00000383831 INO80Q9ULG1 1556 aaPredicted RBP29.44■■■□□ 2.3
CPNE9-202ENST00000383831 NUP155O75694 1391 aa29.43■■■□□ 2.3
CPNE9-202ENST00000383831 ATP7AQ04656 1500 aa29.41■■■□□ 2.3
CPNE9-202ENST00000383831 ERBINQ96RT1 1412 aa29.4■■■□□ 2.3
CPNE9-202ENST00000383831 ANKRD30BQ9BXX2 1392 aa29.4■■■□□ 2.3
CPNE9-202ENST00000383831 UNC13BO14795 1591 aa29.39■■■□□ 2.3
CPNE9-202ENST00000383831 TONSLQ96HA7 1378 aa29.39■■■□□ 2.29
CPNE9-202ENST00000383831 DIP2BQ9P265 1576 aa29.38■■■□□ 2.29
CPNE9-202ENST00000383831 NEO1Q92859 1461 aa29.37■■■□□ 2.29
CPNE9-202ENST00000383831 ZNF316A6NFI3 1004 aaPredicted RBP29.36■■■□□ 2.29
CPNE9-202ENST00000383831 ZNF518AQ6AHZ1 1483 aa29.36■■■□□ 2.29
CPNE9-202ENST00000383831 PKD2Q13563 968 aa29.34■■■□□ 2.29
CPNE9-202ENST00000383831 POGZQ7Z3K3 1410 aa29.33■■■□□ 2.29
CPNE9-202ENST00000383831 FAM135AQ9P2D6 1515 aa29.33■■■□□ 2.29
CPNE9-202ENST00000383831 KDM5CP41229 1560 aa29.31■■■□□ 2.28
CPNE9-202ENST00000383831 KIDINS220Q9ULH0 1771 aa29.3■■■□□ 2.28
CPNE9-202ENST00000383831 PPP1R15AO75807 674 aaPredicted RBP29.3■■■□□ 2.28
CPNE9-202ENST00000383831 MAGI2Q86UL8 1455 aa29.29■■■□□ 2.28
CPNE9-202ENST00000383831 FAM69CQ0P6D2 419 aa29.29■■■□□ 2.28
CPNE9-202ENST00000383831 RPRD2Q5VT52 1461 aaKnown RBP29.28■■■□□ 2.28
CPNE9-202ENST00000383831 IQGAP3Q86VI3 1631 aa29.27■■■□□ 2.28
CPNE9-202ENST00000383831 MYT1LQ9UL68 1186 aa29.26■■■□□ 2.28
CPNE9-202ENST00000383831 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.24■■■□□ 2.27
CPNE9-202ENST00000383831 MLH3Q9UHC1 1453 aa29.22■■■□□ 2.27
CPNE9-202ENST00000383831 HECW2Q9P2P5 1572 aa29.22■■■□□ 2.27
CPNE9-202ENST00000383831 DHX29Q7Z478 1369 aaKnown RBP29.2■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms