RNA–Protein interactions for RNA: ENST00000381998.8

MSR1-204, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 1 (best) BASIC

Gene MSR1, Length 2,826 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-204ENST00000381998 TSPYL2Q9H2G4 693 aaPredicted RBP8.72□□□□□ -1.01
MSR1-204ENST00000381998 FANCD2Q9BXW9 1451 aa8.71□□□□□ -1.02
MSR1-204ENST00000381998 CDK11BP21127 795 aaKnown RBP8.71□□□□□ -1.02
MSR1-204ENST00000381998 CDK11AQ9UQ88 783 aaPredicted RBP8.71□□□□□ -1.02
MSR1-204ENST00000381998 NKX1-1Q15270 411 aaPredicted RBP8.69□□□□□ -1.02
MSR1-204ENST00000381998 FAM212AQ96EL1 285 aa8.69□□□□□ -1.02
MSR1-204ENST00000381998 ARHGAP35Q9NRY4 1499 aa8.69□□□□□ -1.02
MSR1-204ENST00000381998 DHX57Q6P158 1386 aaKnown RBP8.68□□□□□ -1.02
MSR1-204ENST00000381998 KANK4Q5T7N3 995 aaPredicted RBP8.68□□□□□ -1.02
MSR1-204ENST00000381998 CARMIL1Q5VZK9 1371 aa8.68□□□□□ -1.02
MSR1-204ENST00000381998 NESP48681 1621 aa8.68□□□□□ -1.02
MSR1-204ENST00000381998 GSE1Q14687 1217 aa8.67□□□□□ -1.02
MSR1-204ENST00000381998 PRKAR2AP13861 404 aaKnown RBP8.67□□□□□ -1.02
MSR1-204ENST00000381998 HMGB1P09429 215 aaKnown RBP8.66□□□□□ -1.02
MSR1-204ENST00000381998 CHMP4AQ9BY43 222 aa8.66□□□□□ -1.02
MSR1-204ENST00000381998 DNAJC5Q9H3Z4 198 aa8.66□□□□□ -1.02
MSR1-204ENST00000381998 DNMBPQ6XZF7 1577 aa8.66□□□□□ -1.02
MSR1-204ENST00000381998 CLSPNQ9HAW4 1339 aa8.65□□□□□ -1.02
MSR1-204ENST00000381998 RAD54L2Q9Y4B4 1467 aa8.65□□□□□ -1.02
MSR1-204ENST00000381998 IGSF3O75054 1194 aa8.65□□□□□ -1.03
MSR1-204ENST00000381998 FARP1Q9Y4F1 1045 aaPredicted RBP8.65□□□□□ -1.03
MSR1-204ENST00000381998 TOPBP1Q92547 1522 aa8.64□□□□□ -1.03
MSR1-204ENST00000381998 PDIA4P13667 645 aaKnown RBP8.64□□□□□ -1.03
MSR1-204ENST00000381998 STK25O00506 426 aa8.64□□□□□ -1.03
MSR1-204ENST00000381998 RIOK3O14730 519 aaKnown RBP8.64□□□□□ -1.03
MSR1-204ENST00000381998 POLA1P09884 1462 aaPredicted RBP8.63□□□□□ -1.03
MSR1-204ENST00000381998 ABCA10Q8WWZ4 1543 aa8.63□□□□□ -1.03
MSR1-204ENST00000381998 SPRYD3Q8NCJ5 442 aa8.62□□□□□ -1.03
MSR1-204ENST00000381998 HSP90B1P14625 803 aaKnown RBP8.62□□□□□ -1.03
MSR1-204ENST00000381998 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.62□□□□□ -1.03
MSR1-204ENST00000381998 HS6ST3Q8IZP7 471 aa8.62□□□□□ -1.03
MSR1-204ENST00000381998 ZFP91Q96JP5 570 aaPredicted RBP8.62□□□□□ -1.03
MSR1-204ENST00000381998 RRBP1Q9P2E9 1410 aaKnown RBP8.61□□□□□ -1.03
MSR1-204ENST00000381998 PCDHB8Q9UN66 801 aa8.61□□□□□ -1.03
MSR1-204ENST00000381998 PCDHB13Q9Y5F0 798 aa8.61□□□□□ -1.03
MSR1-204ENST00000381998 LAMC3Q9Y6N6 1575 aa8.6□□□□□ -1.03
MSR1-204ENST00000381998 ZBTB7CA1YPR0 619 aa8.6□□□□□ -1.03
MSR1-204ENST00000381998 CHRDL2Q6WN34 429 aa8.6□□□□□ -1.03
MSR1-204ENST00000381998 BCL11BQ9C0K0 894 aaPredicted RBP8.6□□□□□ -1.03
MSR1-204ENST00000381998 URB2Q14146 1524 aaKnown RBP8.6□□□□□ -1.03
MSR1-204ENST00000381998 PIP4P2Q8N4L2 257 aa8.59□□□□□ -1.03
MSR1-204ENST00000381998 SUPT16HQ9Y5B9 1047 aaKnown RBP8.58□□□□□ -1.04
MSR1-204ENST00000381998 FXR2P51116 673 aaKnown RBP eCLIP8.58□□□□□ -1.04
MSR1-204ENST00000381998 STK24Q9Y6E0 443 aa8.58□□□□□ -1.04
MSR1-204ENST00000381998 MAP3K1Q13233 1512 aa8.57□□□□□ -1.04
MSR1-204ENST00000381998 CCNB3Q8WWL7 1395 aa8.57□□□□□ -1.04
MSR1-204ENST00000381998 TIAM1Q13009 1591 aa8.57□□□□□ -1.04
MSR1-204ENST00000381998 ITGAEP38570 1179 aa8.57□□□□□ -1.04
MSR1-204ENST00000381998 P3H3Q8IVL6 736 aa8.56□□□□□ -1.04
MSR1-204ENST00000381998 PDS5BQ9NTI5 1447 aa8.55□□□□□ -1.04
MSR1-204ENST00000381998 WDR97A6NE52 1622 aa8.55□□□□□ -1.04
MSR1-204ENST00000381998 BRPF1P55201 1214 aaPredicted RBP8.55□□□□□ -1.04
MSR1-204ENST00000381998 CCDC61Q9Y6R9 512 aa8.55□□□□□ -1.04
MSR1-204ENST00000381998 CUL7Q14999 1698 aa8.55□□□□□ -1.04
MSR1-204ENST00000381998 FHAD1B1AJZ9 1412 aa8.54□□□□□ -1.04
MSR1-204ENST00000381998 LRRC9Q6ZRR7 1453 aa8.54□□□□□ -1.04
MSR1-204ENST00000381998 GTPBP6O43824 516 aaPredicted RBP8.54□□□□□ -1.04
MSR1-204ENST00000381998 TDRD9Q8NDG6 1382 aaKnown RBP8.54□□□□□ -1.04
MSR1-204ENST00000381998 FHOD3Q2V2M9 1422 aa8.54□□□□□ -1.04
MSR1-204ENST00000381998 KCNH8Q96L42 1107 aa8.53□□□□□ -1.04
MSR1-204ENST00000381998 UBE2Q2Q8WVN8 375 aa8.53□□□□□ -1.04
MSR1-204ENST00000381998 PCF11O94913 1555 aaKnown RBP8.53□□□□□ -1.04
MSR1-204ENST00000381998 VGFO15240 615 aaPredicted RBP8.53□□□□□ -1.04
MSR1-204ENST00000381998 ARID3AQ99856 593 aa8.53□□□□□ -1.04
MSR1-204ENST00000381998 RAB3GAP2Q9H2M9 1393 aa8.52□□□□□ -1.04
MSR1-204ENST00000381998 MAPKBP1O60336 1514 aa8.52□□□□□ -1.05
MSR1-204ENST00000381998 ABCA5Q8WWZ7 1642 aa8.52□□□□□ -1.05
MSR1-204ENST00000381998 EFCAB5A4FU69 1503 aa8.52□□□□□ -1.05
MSR1-204ENST00000381998 PHLDB1Q86UU1 1377 aa8.52□□□□□ -1.05
MSR1-204ENST00000381998 PUS7Q96PZ0 661 aaKnown RBP8.52□□□□□ -1.05
MSR1-204ENST00000381998 GAPVD1Q14C86 1478 aa8.51□□□□□ -1.05
MSR1-204ENST00000381998 CHRM1P11229 460 aaPredicted RBP8.51□□□□□ -1.05
MSR1-204ENST00000381998 NECTIN2Q92692 538 aa8.51□□□□□ -1.05
MSR1-204ENST00000381998 KIF21AQ7Z4S6 1674 aa8.51□□□□□ -1.05
MSR1-204ENST00000381998 CFAP43Q8NDM7 1665 aa8.5□□□□□ -1.05
MSR1-204ENST00000381998 CASKIN1Q8WXD9 1431 aa8.5□□□□□ -1.05
MSR1-204ENST00000381998 CTTNBP2Q8WZ74 1663 aa8.5□□□□□ -1.05
MSR1-204ENST00000381998 ATP1B4Q9UN42 357 aaPredicted RBP8.5□□□□□ -1.05
MSR1-204ENST00000381998 MAP3K13O43283 966 aa8.49□□□□□ -1.05
MSR1-204ENST00000381998 BRD2P25440 801 aaKnown RBP8.49□□□□□ -1.05
MSR1-204ENST00000381998 IFNL1Q8IU54 200 aa8.49□□□□□ -1.05
MSR1-204ENST00000381998 AQRO60306 1485 aaKnown RBP eCLIP8.49□□□□□ -1.05
MSR1-204ENST00000381998 FYCO1Q9BQS8 1478 aa8.49□□□□□ -1.05
MSR1-204ENST00000381998 RSPH6AQ9H0K4 717 aa8.49□□□□□ -1.05
MSR1-204ENST00000381998 ZMYND15Q9H091 742 aa8.48□□□□□ -1.05
MSR1-204ENST00000381998 TARBP1Q13395 1621 aaKnown RBP8.48□□□□□ -1.05
MSR1-204ENST00000381998 PHF12Q96QT6 1004 aa8.48□□□□□ -1.05
MSR1-204ENST00000381998 FMN1Q68DA7 1419 aa8.47□□□□□ -1.05
MSR1-204ENST00000381998 SNAPC4Q5SXM2 1469 aa8.47□□□□□ -1.05
MSR1-204ENST00000381998 SETD5Q9C0A6 1442 aa8.46□□□□□ -1.06
MSR1-204ENST00000381998 SAMD9Q5K651 1589 aa8.46□□□□□ -1.06
MSR1-204ENST00000381998 FAM50AQ14320 339 aaKnown RBP8.46□□□□□ -1.06
MSR1-204ENST00000381998 SIN3AQ96ST3 1273 aa8.46□□□□□ -1.06
MSR1-204ENST00000381998 TRPC6Q9Y210 931 aa8.45□□□□□ -1.06
MSR1-204ENST00000381998 DDX10Q13206 875 aaKnown RBP8.45□□□□□ -1.06
MSR1-204ENST00000381998 DHX37Q8IY37 1157 aaKnown RBP8.44□□□□□ -1.06
MSR1-204ENST00000381998 C1orf115Q9H7X2 142 aa8.43□□□□□ -1.06
MSR1-204ENST00000381998 ZRANB1Q9UGI0 708 aa8.43□□□□□ -1.06
MSR1-204ENST00000381998 MRC2Q9UBG0 1479 aa8.43□□□□□ -1.06
MSR1-204ENST00000381998 CD44P16070 742 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms