RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 GCC2Q8IWJ2 1684 aa12.75□□□□□ -0.37
GPNMB-202ENST00000381990 GPATCH8Q9UKJ3 1502 aaKnown RBP12.75□□□□□ -0.37
GPNMB-202ENST00000381990 DNMT1P26358 1616 aaKnown RBP12.75□□□□□ -0.37
GPNMB-202ENST00000381990 ERCC6L2Q5T890 1561 aa12.75□□□□□ -0.37
GPNMB-202ENST00000381990 DAPK1P53355 1430 aa12.74□□□□□ -0.37
GPNMB-202ENST00000381990 CFDP1Q9UEE9 299 aaPredicted RBP12.73□□□□□ -0.37
GPNMB-202ENST00000381990 ABCC10Q5T3U5 1492 aa12.73□□□□□ -0.37
GPNMB-202ENST00000381990 CHIC2Q9UKJ5 165 aa12.72□□□□□ -0.37
GPNMB-202ENST00000381990 ROCK1Q13464 1354 aa12.72□□□□□ -0.37
GPNMB-202ENST00000381990 CAMSAP2Q08AD1 1489 aa12.72□□□□□ -0.37
GPNMB-202ENST00000381990 ZNF644Q9H582 1327 aaPredicted RBP12.72□□□□□ -0.37
GPNMB-202ENST00000381990 ABCC5O15440 1437 aa12.72□□□□□ -0.37
GPNMB-202ENST00000381990 ABCC2Q92887 1545 aa12.72□□□□□ -0.37
GPNMB-202ENST00000381990 RRP7BPQ9NSQ0 103 aa12.71□□□□□ -0.37
GPNMB-202ENST00000381990 TSHZ2Q9NRE2 1034 aa12.71□□□□□ -0.38
GPNMB-202ENST00000381990 CDC42BPAQ5VT25 1732 aa12.71□□□□□ -0.38
GPNMB-202ENST00000381990 ANP32EQ9BTT0 268 aa12.69□□□□□ -0.38
GPNMB-202ENST00000381990 TIMELESSQ9UNS1 1208 aa12.68□□□□□ -0.38
GPNMB-202ENST00000381990 UHRF1BP1LA0JNW5 1464 aa12.67□□□□□ -0.38
GPNMB-202ENST00000381990 KDM6BO15054 1643 aa12.66□□□□□ -0.38
GPNMB-202ENST00000381990 SIN3AQ96ST3 1273 aa12.66□□□□□ -0.38
GPNMB-202ENST00000381990 ZNF777Q9ULD5 760 aaPredicted RBP12.66□□□□□ -0.38
GPNMB-202ENST00000381990 CROCC2H7BZ55 1655 aa12.66□□□□□ -0.38
GPNMB-202ENST00000381990 ADGBQ8N7X0 1667 aa12.65□□□□□ -0.38
GPNMB-202ENST00000381990 ADGRL2O95490 1459 aa12.64□□□□□ -0.39
GPNMB-202ENST00000381990 PREX2Q70Z35 1606 aa12.64□□□□□ -0.39
GPNMB-202ENST00000381990 KDM5BQ9UGL1 1544 aa12.63□□□□□ -0.39
GPNMB-202ENST00000381990 NCOA1Q15788 1441 aa12.62□□□□□ -0.39
GPNMB-202ENST00000381990 TRIM52Q96A61 297 aa12.62□□□□□ -0.39
GPNMB-202ENST00000381990 ZCCHC11Q5TAX3 1644 aaKnown RBP12.62□□□□□ -0.39
GPNMB-202ENST00000381990 SHANK2Q9UPX8 1470 aa12.62□□□□□ -0.39
GPNMB-202ENST00000381990 CDC42BPBQ9Y5S2 1711 aa12.62□□□□□ -0.39
GPNMB-202ENST00000381990 ARHGEF5Q12774 1597 aa12.61□□□□□ -0.39
GPNMB-202ENST00000381990 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.6□□□□□ -0.39
GPNMB-202ENST00000381990 ANKRD30AQ9BXX3 1397 aa12.6□□□□□ -0.39
GPNMB-202ENST00000381990 TTC37Q6PGP7 1564 aa12.6□□□□□ -0.39
GPNMB-202ENST00000381990 DENND4BO75064 1496 aaPredicted RBP12.59□□□□□ -0.39
GPNMB-202ENST00000381990 SAMD9LQ8IVG5 1584 aa12.59□□□□□ -0.39
GPNMB-202ENST00000381990 MPHOSPH9Q99550 1183 aa12.58□□□□□ -0.39
GPNMB-202ENST00000381990 C9orf84Q5VXU9 1444 aa12.58□□□□□ -0.4
GPNMB-202ENST00000381990 MYO5CQ9NQX4 1742 aa12.58□□□□□ -0.4
GPNMB-202ENST00000381990 OSCARQ8IYS5 282 aa12.58□□□□□ -0.4
GPNMB-202ENST00000381990 MBD5Q9P267 1494 aa12.57□□□□□ -0.4
GPNMB-202ENST00000381990 TONSLQ96HA7 1378 aa12.57□□□□□ -0.4
GPNMB-202ENST00000381990 ARHGAP5Q13017 1502 aa12.57□□□□□ -0.4
GPNMB-202ENST00000381990 PPP1R15AO75807 674 aaPredicted RBP12.56□□□□□ -0.4
GPNMB-202ENST00000381990 TSPY4P0CV99 314 aa12.56□□□□□ -0.4
GPNMB-202ENST00000381990 TSPY10P0CW01 314 aa12.56□□□□□ -0.4
GPNMB-202ENST00000381990 RSPH4AQ5TD94 716 aa12.56□□□□□ -0.4
GPNMB-202ENST00000381990 CCDC141Q6ZP82 1450 aa12.56□□□□□ -0.4
GPNMB-202ENST00000381990 HNRNPMP52272 730 aaKnown RBP eCLIP12.55□□□□□ -0.4
GPNMB-202ENST00000381990 KCNH8Q96L42 1107 aa12.54□□□□□ -0.4
GPNMB-202ENST00000381990 ANKRD50Q9ULJ7 1429 aa12.54□□□□□ -0.4
GPNMB-202ENST00000381990 PLEKHH2Q8IVE3 1493 aa12.54□□□□□ -0.4
GPNMB-202ENST00000381990 CCER2I3L3R5 266 aa12.53□□□□□ -0.4
GPNMB-202ENST00000381990 KIAA1107Q9UPP5 1409 aa12.53□□□□□ -0.4
GPNMB-202ENST00000381990 NEFLP07196 543 aa12.53□□□□□ -0.4
GPNMB-202ENST00000381990 PLCH2O75038 1416 aa12.53□□□□□ -0.4
GPNMB-202ENST00000381990 SYCP2Q9BX26 1530 aa12.52□□□□□ -0.4
GPNMB-202ENST00000381990 PZPP20742 1482 aa12.52□□□□□ -0.41
GPNMB-202ENST00000381990 FKBP8Q14318 412 aa12.52□□□□□ -0.41
GPNMB-202ENST00000381990 SLC4A1APQ9BWU0 796 aaKnown RBP12.52□□□□□ -0.41
GPNMB-202ENST00000381990 MAST1Q9Y2H9 1570 aa12.51□□□□□ -0.41
GPNMB-202ENST00000381990 KIF15Q9NS87 1388 aa12.51□□□□□ -0.41
GPNMB-202ENST00000381990 ANKRD30BQ9BXX2 1392 aa12.5□□□□□ -0.41
GPNMB-202ENST00000381990 WDR7Q9Y4E6 1490 aa12.5□□□□□ -0.41
GPNMB-202ENST00000381990 EFCAB2Q5VUJ9 269 aa12.5□□□□□ -0.41
GPNMB-202ENST00000381990 ARAP3Q8WWN8 1544 aa12.49□□□□□ -0.41
GPNMB-202ENST00000381990 FOXD1Q16676 465 aa12.48□□□□□ -0.41
GPNMB-202ENST00000381990 RPRD2Q5VT52 1461 aaKnown RBP12.47□□□□□ -0.41
GPNMB-202ENST00000381990 DDX10Q13206 875 aaKnown RBP12.47□□□□□ -0.41
GPNMB-202ENST00000381990 KDM5DQ9BY66 1539 aa12.47□□□□□ -0.41
GPNMB-202ENST00000381990 ABCC1P33527 1531 aa12.46□□□□□ -0.41
GPNMB-202ENST00000381990 ARHGEF12Q9NZN5 1544 aa12.46□□□□□ -0.41
GPNMB-202ENST00000381990 PLXNC1O60486 1568 aa12.46□□□□□ -0.41
GPNMB-202ENST00000381990 ABCA9Q8IUA7 1624 aa12.45□□□□□ -0.42
GPNMB-202ENST00000381990 ANP32CO43423 234 aa12.45□□□□□ -0.42
GPNMB-202ENST00000381990 RBM19Q9Y4C8 960 aaKnown RBP12.45□□□□□ -0.42
GPNMB-202ENST00000381990 NUP155O75694 1391 aa12.45□□□□□ -0.42
GPNMB-202ENST00000381990 BCANQ96GW7 911 aa12.45□□□□□ -0.42
GPNMB-202ENST00000381990 ASXL2Q76L83 1435 aa12.44□□□□□ -0.42
GPNMB-202ENST00000381990 BCL11AQ9H165 835 aa12.44□□□□□ -0.42
GPNMB-202ENST00000381990 PKD2Q13563 968 aa12.43□□□□□ -0.42
GPNMB-202ENST00000381990 NPM1P06748 294 aaKnown RBP eCLIP12.42□□□□□ -0.42
GPNMB-202ENST00000381990 L3MBTL2Q969R5 705 aa12.42□□□□□ -0.42
GPNMB-202ENST00000381990 TEX14Q8IWB6 1497 aa12.42□□□□□ -0.42
GPNMB-202ENST00000381990 DUOX2Q9NRD8 1548 aa12.41□□□□□ -0.42
GPNMB-202ENST00000381990 TRAPPC8Q9Y2L5 1435 aa12.41□□□□□ -0.42
GPNMB-202ENST00000381990 UNC13BO14795 1591 aa12.4□□□□□ -0.42
GPNMB-202ENST00000381990 FANCAO15360 1455 aa12.4□□□□□ -0.42
GPNMB-202ENST00000381990 RTEL1-TNFRSF6BF6WH68 1400 aa12.39□□□□□ -0.43
GPNMB-202ENST00000381990 ERBINQ96RT1 1412 aa12.39□□□□□ -0.43
GPNMB-202ENST00000381990 FAM135AQ9P2D6 1515 aa12.38□□□□□ -0.43
GPNMB-202ENST00000381990 SPAG9O60271 1321 aaKnown RBP12.37□□□□□ -0.43
GPNMB-202ENST00000381990 FANCIQ9NVI1 1328 aa12.36□□□□□ -0.43
GPNMB-202ENST00000381990 ZFYVE16Q7Z3T8 1539 aa12.36□□□□□ -0.43
GPNMB-202ENST00000381990 IQGAP3Q86VI3 1631 aa12.35□□□□□ -0.43
GPNMB-202ENST00000381990 MAGI2Q86UL8 1455 aa12.35□□□□□ -0.43
GPNMB-202ENST00000381990 ERICH6BQ5W0A0 696 aa12.35□□□□□ -0.43
GPNMB-202ENST00000381990 ADGRL1O94910 1474 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms