RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 LAMC3Q9Y6N6 1575 aa18.17■□□□□ 0.5
SNPH-201ENST00000381867 RUSC2Q8N2Y8 1516 aa18.15■□□□□ 0.5
SNPH-201ENST00000381867 TOP2BQ02880 1626 aa18.14■□□□□ 0.49
SNPH-201ENST00000381867 DNMBPQ6XZF7 1577 aa18.14■□□□□ 0.49
SNPH-201ENST00000381867 KIF21BO75037 1637 aa18.13■□□□□ 0.49
SNPH-201ENST00000381867 TOPBP1Q92547 1522 aa18.12■□□□□ 0.49
SNPH-201ENST00000381867 CFAP53Q96M91 514 aa18.12■□□□□ 0.49
SNPH-201ENST00000381867 PEG3Q9GZU2 1588 aa18.12■□□□□ 0.49
SNPH-201ENST00000381867 CASC1Q6TDU7 716 aa18.11■□□□□ 0.49
SNPH-201ENST00000381867 ZRSR1Q15695 479 aaKnown RBP18.11■□□□□ 0.49
SNPH-201ENST00000381867 SPAG9O60271 1321 aaKnown RBP18.1■□□□□ 0.49
SNPH-201ENST00000381867 KNSTRNQ9Y448 316 aa18.1■□□□□ 0.49
SNPH-201ENST00000381867 POGKQ9P215 609 aa18.09■□□□□ 0.49
SNPH-201ENST00000381867 AQRO60306 1485 aaKnown RBP eCLIP18.09■□□□□ 0.49
SNPH-201ENST00000381867 NESP48681 1621 aa18.07■□□□□ 0.48
SNPH-201ENST00000381867 CUX1P39880 1505 aa18.06■□□□□ 0.48
SNPH-201ENST00000381867 DEKP35659 375 aaKnown RBP18.06■□□□□ 0.48
SNPH-201ENST00000381867 SYNJ1O43426 1573 aa18.06■□□□□ 0.48
SNPH-201ENST00000381867 NUP155O75694 1391 aa18.06■□□□□ 0.48
SNPH-201ENST00000381867 PKD2Q13563 968 aa18.05■□□□□ 0.48
SNPH-201ENST00000381867 FTSJ3Q8IY81 847 aaKnown RBP18.05■□□□□ 0.48
SNPH-201ENST00000381867 EFCAB5A4FU69 1503 aa18.04■□□□□ 0.48
SNPH-201ENST00000381867 GGT6Q6P531 493 aa18.04■□□□□ 0.48
SNPH-201ENST00000381867 LMOD2Q6P5Q4 547 aa18.03■□□□□ 0.48
SNPH-201ENST00000381867 RGS3P49796 1198 aa18.03■□□□□ 0.48
SNPH-201ENST00000381867 TMF1P82094 1093 aa18.03■□□□□ 0.48
SNPH-201ENST00000381867 RAB3GAP2Q9H2M9 1393 aa18.03■□□□□ 0.48
SNPH-201ENST00000381867 POLA1P09884 1462 aaPredicted RBP18.03■□□□□ 0.48
SNPH-201ENST00000381867 DCAF11Q8TEB1 546 aa18.02■□□□□ 0.48
SNPH-201ENST00000381867 SIN3AQ96ST3 1273 aa18.02■□□□□ 0.48
SNPH-201ENST00000381867 SENP3-EIF4A1A0A087X0R7 540 aa18.01■□□□□ 0.47
SNPH-201ENST00000381867 L1TD1Q5T7N2 865 aaKnown RBP18.01■□□□□ 0.47
SNPH-201ENST00000381867 MPHOSPH9Q99550 1183 aa18■□□□□ 0.47
SNPH-201ENST00000381867 B4GALNT3Q6L9W6 998 aa18■□□□□ 0.47
SNPH-201ENST00000381867 CASKIN1Q8WXD9 1431 aa17.99■□□□□ 0.47
SNPH-201ENST00000381867 HSP90AB1P08238 724 aaKnown RBP17.98■□□□□ 0.47
SNPH-201ENST00000381867 MLECQ14165 292 aa17.98■□□□□ 0.47
SNPH-201ENST00000381867 HNRNPMP52272 730 aaKnown RBP eCLIP17.98■□□□□ 0.47
SNPH-201ENST00000381867 TPRNQ4KMQ1 711 aa17.97■□□□□ 0.47
SNPH-201ENST00000381867 KIF3BO15066 747 aa17.97■□□□□ 0.47
SNPH-201ENST00000381867 RBM19Q9Y4C8 960 aaKnown RBP17.97■□□□□ 0.47
SNPH-201ENST00000381867 NUDCQ9Y266 331 aa17.96■□□□□ 0.47
SNPH-201ENST00000381867 MYOM3Q5VTT5 1437 aa17.96■□□□□ 0.47
SNPH-201ENST00000381867 UNC13AQ9UPW8 1703 aa17.96■□□□□ 0.47
SNPH-201ENST00000381867 GOLGA6L6A8MZA4 724 aa17.96■□□□□ 0.47
SNPH-201ENST00000381867 PLCB2Q00722 1185 aa17.96■□□□□ 0.47
SNPH-201ENST00000381867 EIF3AQ14152 1382 aaKnown RBP17.95■□□□□ 0.46
SNPH-201ENST00000381867 FYCO1Q9BQS8 1478 aa17.94■□□□□ 0.46
SNPH-201ENST00000381867 ABCA10Q8WWZ4 1543 aa17.94■□□□□ 0.46
SNPH-201ENST00000381867 SYNJ2O15056 1496 aa17.93■□□□□ 0.46
SNPH-201ENST00000381867 PRXQ9BXM0 1461 aa17.93■□□□□ 0.46
SNPH-201ENST00000381867 PNNQ9H307 717 aaKnown RBP17.93■□□□□ 0.46
SNPH-201ENST00000381867 CHMP4BQ9H444 224 aaKnown RBP17.92■□□□□ 0.46
SNPH-201ENST00000381867 MSNP26038 577 aaKnown RBP17.92■□□□□ 0.46
SNPH-201ENST00000381867 UACAQ9BZF9 1416 aa17.92■□□□□ 0.46
SNPH-201ENST00000381867 CHAF1AQ13111 956 aaPredicted RBP17.92■□□□□ 0.46
SNPH-201ENST00000381867 MS4A1P11836 297 aa17.91■□□□□ 0.46
SNPH-201ENST00000381867 HSCBQ8IWL3 235 aa17.91■□□□□ 0.46
SNPH-201ENST00000381867 NRDCO43847 1150 aa17.9■□□□□ 0.46
SNPH-201ENST00000381867 FRAT1Q92837 279 aaPredicted RBP17.9■□□□□ 0.46
SNPH-201ENST00000381867 WASHC2CQ9Y4E1 1318 aa17.9■□□□□ 0.46
SNPH-201ENST00000381867 MAPK8IP3Q9UPT6 1336 aa17.89■□□□□ 0.46
SNPH-201ENST00000381867 SNAPC4Q5SXM2 1469 aa17.89■□□□□ 0.45
SNPH-201ENST00000381867 CYB5RLQ6IPT4 315 aa17.89■□□□□ 0.45
SNPH-201ENST00000381867 NPHP1O15259 732 aa17.89■□□□□ 0.45
SNPH-201ENST00000381867 CCER2I3L3R5 266 aa17.88■□□□□ 0.45
SNPH-201ENST00000381867 PRG4Q92954 1404 aaPredicted RBP17.88■□□□□ 0.45
SNPH-201ENST00000381867 NEUROD2Q15784 382 aa17.88■□□□□ 0.45
SNPH-201ENST00000381867 PRDM2Q13029 1718 aa17.88■□□□□ 0.45
SNPH-201ENST00000381867 CUL7Q14999 1698 aa17.86■□□□□ 0.45
SNPH-201ENST00000381867 EID1Q9Y6B2 187 aa17.85■□□□□ 0.45
SNPH-201ENST00000381867 LRRC9Q6ZRR7 1453 aa17.85■□□□□ 0.45
SNPH-201ENST00000381867 ROCK2O75116 1388 aaKnown RBP17.85■□□□□ 0.45
SNPH-201ENST00000381867 FGD6Q6ZV73 1430 aa17.85■□□□□ 0.45
SNPH-201ENST00000381867 KIAA0586Q9BVV6 1533 aa17.83■□□□□ 0.44
SNPH-201ENST00000381867 SRPK2P78362 688 aaKnown RBP17.82■□□□□ 0.44
SNPH-201ENST00000381867 HDGFL2Q7Z4V5 671 aaPredicted RBP17.82■□□□□ 0.44
SNPH-201ENST00000381867 CCDC144AA2RUR9 1427 aa17.81■□□□□ 0.44
SNPH-201ENST00000381867 PLEKHH2Q8IVE3 1493 aa17.81■□□□□ 0.44
SNPH-201ENST00000381867 MAGI1Q96QZ7 1491 aaPredicted RBP17.81■□□□□ 0.44
SNPH-201ENST00000381867 HECW1Q76N89 1606 aa17.81■□□□□ 0.44
SNPH-201ENST00000381867 EHBP1L1Q8N3D4 1523 aa17.8■□□□□ 0.44
SNPH-201ENST00000381867 GOLGA6L4A6NEF3 574 aa17.78■□□□□ 0.44
SNPH-201ENST00000381867 STAC3Q96MF2 364 aa17.78■□□□□ 0.44
SNPH-201ENST00000381867 HSPA5P11021 654 aaKnown RBP17.78■□□□□ 0.44
SNPH-201ENST00000381867 CC2D1BQ5T0F9 858 aaKnown RBP17.77■□□□□ 0.44
SNPH-201ENST00000381867 NCOA2Q15596 1464 aa17.77■□□□□ 0.44
SNPH-201ENST00000381867 PTMSP20962 102 aa17.77■□□□□ 0.43
SNPH-201ENST00000381867 FGD1P98174 961 aa17.76■□□□□ 0.43
SNPH-201ENST00000381867 CFAP44Q96MT7 982 aa17.75■□□□□ 0.43
SNPH-201ENST00000381867 KTN1Q86UP2 1357 aaKnown RBP17.74■□□□□ 0.43
SNPH-201ENST00000381867 FAM69CQ0P6D2 419 aa17.74■□□□□ 0.43
SNPH-201ENST00000381867 FOXD1Q16676 465 aa17.74■□□□□ 0.43
SNPH-201ENST00000381867 KCNJ4P48050 445 aa17.74■□□□□ 0.43
SNPH-201ENST00000381867 SPRYD3Q8NCJ5 442 aa17.74■□□□□ 0.43
SNPH-201ENST00000381867 MCCP23508 829 aa17.73■□□□□ 0.43
SNPH-201ENST00000381867 TSHZ2Q9NRE2 1034 aa17.73■□□□□ 0.43
SNPH-201ENST00000381867 MIA2Q96PC5 1412 aa17.73■□□□□ 0.43
SNPH-201ENST00000381867 U2SURPO15042 1029 aaKnown RBP17.73■□□□□ 0.43
SNPH-201ENST00000381867 MORC1Q86VD1 984 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms