RNA–Protein interactions for RNA: ENST00000381578.6

SHOX-203, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHOX, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-203ENST00000381578 WASHC2AQ641Q2 1341 aa16.17■□□□□ 0.18
SHOX-203ENST00000381578 CASKIN1Q8WXD9 1431 aa16.16■□□□□ 0.18
SHOX-203ENST00000381578 LRRC9Q6ZRR7 1453 aa16.16■□□□□ 0.18
SHOX-203ENST00000381578 TIAM1Q13009 1591 aa16.14■□□□□ 0.17
SHOX-203ENST00000381578 KDM2AQ9Y2K7 1162 aa16.13■□□□□ 0.17
SHOX-203ENST00000381578 JPH4Q96JJ6 628 aa16.13■□□□□ 0.17
SHOX-203ENST00000381578 PCF11O94913 1555 aaKnown RBP16.13■□□□□ 0.17
SHOX-203ENST00000381578 NUDCQ9Y266 331 aa16.13■□□□□ 0.17
SHOX-203ENST00000381578 FYCO1Q9BQS8 1478 aa16.13■□□□□ 0.17
SHOX-203ENST00000381578 CTTNBP2Q8WZ74 1663 aa16.12■□□□□ 0.17
SHOX-203ENST00000381578 EXOC6Q8TAG9 804 aa16.12■□□□□ 0.17
SHOX-203ENST00000381578 RGS3P49796 1198 aa16.12■□□□□ 0.17
SHOX-203ENST00000381578 AKNAQ7Z591 1439 aa16.12■□□□□ 0.17
SHOX-203ENST00000381578 RRBP1Q9P2E9 1410 aaKnown RBP16.12■□□□□ 0.17
SHOX-203ENST00000381578 PDE4AP27815 886 aa16.11■□□□□ 0.17
SHOX-203ENST00000381578 L3MBTL2Q969R5 705 aa16.11■□□□□ 0.17
SHOX-203ENST00000381578 ZBED9Q6R2W3 1325 aa16.11■□□□□ 0.17
SHOX-203ENST00000381578 PHLDB1Q86UU1 1377 aa16.11■□□□□ 0.17
SHOX-203ENST00000381578 ZNF777Q9ULD5 760 aaPredicted RBP16.1■□□□□ 0.17
SHOX-203ENST00000381578 IQGAP2Q13576 1575 aa16.09■□□□□ 0.17
SHOX-203ENST00000381578 PBRM1Q86U86 1689 aa16.09■□□□□ 0.17
SHOX-203ENST00000381578 SKAP1Q86WV1 359 aa16.09■□□□□ 0.17
SHOX-203ENST00000381578 ADAMTS12P58397 1594 aa16.08■□□□□ 0.17
SHOX-203ENST00000381578 SLC4A1APQ9BWU0 796 aaKnown RBP16.08■□□□□ 0.16
SHOX-203ENST00000381578 PLIN1O60240 522 aa16.08■□□□□ 0.16
SHOX-203ENST00000381578 DDRGK1Q96HY6 314 aa16.07■□□□□ 0.16
SHOX-203ENST00000381578 GRIN2AQ12879 1464 aa16.07■□□□□ 0.16
SHOX-203ENST00000381578 CARMIL2Q6F5E8 1435 aa16.07■□□□□ 0.16
SHOX-203ENST00000381578 ARID4BQ4LE39 1312 aaPredicted RBP16.06■□□□□ 0.16
SHOX-203ENST00000381578 KIAA0586Q9BVV6 1533 aa16.06■□□□□ 0.16
SHOX-203ENST00000381578 EIF4G3O43432 1585 aaKnown RBP16.05■□□□□ 0.16
SHOX-203ENST00000381578 GSE1Q14687 1217 aa16.05■□□□□ 0.16
SHOX-203ENST00000381578 MAGI1Q96QZ7 1491 aaPredicted RBP16.05■□□□□ 0.16
SHOX-203ENST00000381578 MAP3K1Q13233 1512 aa16.04■□□□□ 0.16
SHOX-203ENST00000381578 SYNJ2O15056 1496 aa16.03■□□□□ 0.16
SHOX-203ENST00000381578 TCERG1O14776 1098 aaKnown RBP16.03■□□□□ 0.16
SHOX-203ENST00000381578 NAP1L5Q96NT1 182 aaPredicted RBP16.03■□□□□ 0.16
SHOX-203ENST00000381578 RCAN3Q9UKA8 241 aa16.03■□□□□ 0.16
SHOX-203ENST00000381578 C11orf95C9JLR9 678 aaPredicted RBP16.02■□□□□ 0.15
SHOX-203ENST00000381578 GLIPR1L2Q4G1C9 344 aa16.01■□□□□ 0.15
SHOX-203ENST00000381578 THOC2Q8NI27 1593 aaKnown RBP16■□□□□ 0.15
SHOX-203ENST00000381578 PLEKHD1A6NEE1 506 aa16■□□□□ 0.15
SHOX-203ENST00000381578 FRAT1Q92837 279 aaPredicted RBP16■□□□□ 0.15
SHOX-203ENST00000381578 CANXP27824 592 aaKnown RBP15.99■□□□□ 0.15
SHOX-203ENST00000381578 MAPKBP1O60336 1514 aa15.99■□□□□ 0.15
SHOX-203ENST00000381578 NFKBIBQ15653 356 aa15.98■□□□□ 0.15
SHOX-203ENST00000381578 USP35Q9P2H5 1018 aa15.97■□□□□ 0.15
SHOX-203ENST00000381578 SLKQ9H2G2 1235 aaPredicted RBP15.97■□□□□ 0.15
SHOX-203ENST00000381578 SPRYD3Q8NCJ5 442 aa15.97■□□□□ 0.15
SHOX-203ENST00000381578 MPHOSPH9Q99550 1183 aa15.97■□□□□ 0.15
SHOX-203ENST00000381578 CCDC18Q5T9S5 1454 aa15.96■□□□□ 0.15
SHOX-203ENST00000381578 FGD6Q6ZV73 1430 aa15.96■□□□□ 0.15
SHOX-203ENST00000381578 NCOA2Q15596 1464 aa15.96■□□□□ 0.15
SHOX-203ENST00000381578 CFDP1Q9UEE9 299 aaPredicted RBP15.95■□□□□ 0.14
SHOX-203ENST00000381578 SAMD9Q5K651 1589 aa15.94■□□□□ 0.14
SHOX-203ENST00000381578 RRP1P56182 461 aaKnown RBP15.94■□□□□ 0.14
SHOX-203ENST00000381578 CC2D1BQ5T0F9 858 aaKnown RBP15.94■□□□□ 0.14
SHOX-203ENST00000381578 GZF1Q9H116 711 aaPredicted RBP15.94■□□□□ 0.14
SHOX-203ENST00000381578 KIF7Q2M1P5 1343 aa15.93■□□□□ 0.14
SHOX-203ENST00000381578 CARD11Q9BXL7 1154 aa15.93■□□□□ 0.14
SHOX-203ENST00000381578 CDK13Q14004 1512 aaKnown RBP15.93■□□□□ 0.14
SHOX-203ENST00000381578 MYOM3Q5VTT5 1437 aa15.92■□□□□ 0.14
SHOX-203ENST00000381578 EPRSP07814 1512 aaKnown RBP15.92■□□□□ 0.14
SHOX-203ENST00000381578 CCDC7Q96M83 1385 aa15.92■□□□□ 0.14
SHOX-203ENST00000381578 HECW1Q76N89 1606 aa15.92■□□□□ 0.14
SHOX-203ENST00000381578 UGGT2Q9NYU1 1516 aa15.91■□□□□ 0.14
SHOX-203ENST00000381578 VSIG10Q8N0Z9 540 aa15.9■□□□□ 0.14
SHOX-203ENST00000381578 CFAP43Q8NDM7 1665 aa15.9■□□□□ 0.14
SHOX-203ENST00000381578 PTPRGP23470 1445 aa15.9■□□□□ 0.14
SHOX-203ENST00000381578 CNTLNQ9NXG0 1405 aa15.9■□□□□ 0.14
SHOX-203ENST00000381578 FRAT2O75474 233 aaPredicted RBP15.9■□□□□ 0.14
SHOX-203ENST00000381578 CRBNQ96SW2 442 aa15.89■□□□□ 0.13
SHOX-203ENST00000381578 EHBP1L1Q8N3D4 1523 aa15.89■□□□□ 0.13
SHOX-203ENST00000381578 PRG4Q92954 1404 aaPredicted RBP15.89■□□□□ 0.13
SHOX-203ENST00000381578 BACH2Q9BYV9 841 aa15.88■□□□□ 0.13
SHOX-203ENST00000381578 CDCA7LQ96GN5 454 aa15.87■□□□□ 0.13
SHOX-203ENST00000381578 RGL3Q3MIN7 710 aa15.87■□□□□ 0.13
SHOX-203ENST00000381578 NBPF8Q3BBV2 869 aa15.86■□□□□ 0.13
SHOX-203ENST00000381578 PLB1Q6P1J6 1458 aa15.86■□□□□ 0.13
SHOX-203ENST00000381578 DISP1Q96F81 1524 aa15.86■□□□□ 0.13
SHOX-203ENST00000381578 SUPT6HQ7KZ85 1726 aaKnown RBP15.85■□□□□ 0.13
SHOX-203ENST00000381578 KIAA0556O60303 1618 aa15.84■□□□□ 0.13
SHOX-203ENST00000381578 CEP170Q5SW79 1584 aa15.83■□□□□ 0.13
SHOX-203ENST00000381578 NUP160Q12769 1436 aa15.83■□□□□ 0.12
SHOX-203ENST00000381578 ZNF644Q9H582 1327 aaPredicted RBP15.83■□□□□ 0.12
SHOX-203ENST00000381578 UPF2Q9HAU5 1272 aaKnown RBP15.83■□□□□ 0.12
SHOX-203ENST00000381578 WDR43Q15061 677 aaKnown RBP eCLIP15.82■□□□□ 0.12
SHOX-203ENST00000381578 UBE2Q2Q8WVN8 375 aa15.82■□□□□ 0.12
SHOX-203ENST00000381578 RSPH6AQ9H0K4 717 aa15.82■□□□□ 0.12
SHOX-203ENST00000381578 TSPY4P0CV99 314 aa15.81■□□□□ 0.12
SHOX-203ENST00000381578 TSPY10P0CW01 314 aa15.81■□□□□ 0.12
SHOX-203ENST00000381578 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.8■□□□□ 0.12
SHOX-203ENST00000381578 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.8■□□□□ 0.12
SHOX-203ENST00000381578 PNNQ9H307 717 aaKnown RBP15.8■□□□□ 0.12
SHOX-203ENST00000381578 BECN1Q14457 450 aa15.8■□□□□ 0.12
SHOX-203ENST00000381578 UACAQ9BZF9 1416 aa15.79■□□□□ 0.12
SHOX-203ENST00000381578 NUP153P49790 1475 aaKnown RBP15.79■□□□□ 0.12
SHOX-203ENST00000381578 PKNOX2Q96KN3 472 aa15.78■□□□□ 0.12
SHOX-203ENST00000381578 MS4A1P11836 297 aa15.77■□□□□ 0.12
SHOX-203ENST00000381578 DCAF11Q8TEB1 546 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms