RNA–Protein interactions for RNA: ENST00000381209.7

RPAIN-203, Transcript of RPA interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAIN, Length 1,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-203ENST00000381209 CAMSAP2Q08AD1 1489 aa25.23■■□□□ 1.63
RPAIN-203ENST00000381209 CHIC2Q9UKJ5 165 aa25.22■■□□□ 1.63
RPAIN-203ENST00000381209 RRP7BPQ9NSQ0 103 aa25.21■■□□□ 1.63
RPAIN-203ENST00000381209 GCC2Q8IWJ2 1684 aa25.19■■□□□ 1.62
RPAIN-203ENST00000381209 TIMELESSQ9UNS1 1208 aa25.17■■□□□ 1.62
RPAIN-203ENST00000381209 ZNF777Q9ULD5 760 aaPredicted RBP25.12■■□□□ 1.61
RPAIN-203ENST00000381209 KDM5BQ9UGL1 1544 aa25.12■■□□□ 1.61
RPAIN-203ENST00000381209 ADGRL2O95490 1459 aa25.1■■□□□ 1.61
RPAIN-203ENST00000381209 OSCARQ8IYS5 282 aa25.09■■□□□ 1.61
RPAIN-203ENST00000381209 CDC42BPAQ5VT25 1732 aa25.09■■□□□ 1.61
RPAIN-203ENST00000381209 SIN3AQ96ST3 1273 aa25.07■■□□□ 1.6
RPAIN-203ENST00000381209 NCOA1Q15788 1441 aa25.06■■□□□ 1.6
RPAIN-203ENST00000381209 SHANK2Q9UPX8 1470 aa25.06■■□□□ 1.6
RPAIN-203ENST00000381209 DIEXFQ68CQ4 756 aaKnown RBP25.05■■□□□ 1.6
RPAIN-203ENST00000381209 ANKRD30AQ9BXX3 1397 aa25.03■■□□□ 1.6
RPAIN-203ENST00000381209 KDM6BO15054 1643 aa25.03■■□□□ 1.6
RPAIN-203ENST00000381209 RSPH4AQ5TD94 716 aa25.02■■□□□ 1.6
RPAIN-203ENST00000381209 TRIM52Q96A61 297 aa25.02■■□□□ 1.6
RPAIN-203ENST00000381209 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.02■■□□□ 1.6
RPAIN-203ENST00000381209 NEUROD1Q13562 356 aa25.02■■□□□ 1.6
RPAIN-203ENST00000381209 ZCCHC11Q5TAX3 1644 aaKnown RBP25.01■■□□□ 1.59
RPAIN-203ENST00000381209 PREX2Q70Z35 1606 aa25.01■■□□□ 1.59
RPAIN-203ENST00000381209 ARHGEF5Q12774 1597 aa25■■□□□ 1.59
RPAIN-203ENST00000381209 CROCC2H7BZ55 1655 aa25■■□□□ 1.59
RPAIN-203ENST00000381209 MBD5Q9P267 1494 aa24.99■■□□□ 1.59
RPAIN-203ENST00000381209 ADGBQ8N7X0 1667 aa24.98■■□□□ 1.59
RPAIN-203ENST00000381209 TSPY4P0CV99 314 aa24.97■■□□□ 1.59
RPAIN-203ENST00000381209 TSPY10P0CW01 314 aa24.97■■□□□ 1.59
RPAIN-203ENST00000381209 MPHOSPH9Q99550 1183 aa24.97■■□□□ 1.59
RPAIN-203ENST00000381209 C9orf84Q5VXU9 1444 aa24.97■■□□□ 1.59
RPAIN-203ENST00000381209 TTC37Q6PGP7 1564 aa24.96■■□□□ 1.59
RPAIN-203ENST00000381209 DENND4BO75064 1496 aaPredicted RBP24.95■■□□□ 1.59
RPAIN-203ENST00000381209 SAMD9LQ8IVG5 1584 aa24.94■■□□□ 1.58
RPAIN-203ENST00000381209 PLEKHH2Q8IVE3 1493 aa24.94■■□□□ 1.58
RPAIN-203ENST00000381209 CCDC141Q6ZP82 1450 aa24.93■■□□□ 1.58
RPAIN-203ENST00000381209 KIAA1107Q9UPP5 1409 aa24.93■■□□□ 1.58
RPAIN-203ENST00000381209 HNRNPMP52272 730 aaKnown RBP eCLIP24.92■■□□□ 1.58
RPAIN-203ENST00000381209 KCNH8Q96L42 1107 aa24.92■■□□□ 1.58
RPAIN-203ENST00000381209 CDC42BPBQ9Y5S2 1711 aa24.92■■□□□ 1.58
RPAIN-203ENST00000381209 ARHGAP5Q13017 1502 aa24.92■■□□□ 1.58
RPAIN-203ENST00000381209 PLCH2O75038 1416 aa24.92■■□□□ 1.58
RPAIN-203ENST00000381209 PPP1R15AO75807 674 aaPredicted RBP24.91■■□□□ 1.58
RPAIN-203ENST00000381209 TONSLQ96HA7 1378 aa24.91■■□□□ 1.58
RPAIN-203ENST00000381209 ANKRD50Q9ULJ7 1429 aa24.9■■□□□ 1.58
RPAIN-203ENST00000381209 WDR7Q9Y4E6 1490 aa24.87■■□□□ 1.57
RPAIN-203ENST00000381209 EFCAB2Q5VUJ9 269 aa24.86■■□□□ 1.57
RPAIN-203ENST00000381209 MYO5CQ9NQX4 1742 aa24.85■■□□□ 1.57
RPAIN-203ENST00000381209 ARAP3Q8WWN8 1544 aa24.84■■□□□ 1.57
RPAIN-203ENST00000381209 KIF15Q9NS87 1388 aa24.83■■□□□ 1.57
RPAIN-203ENST00000381209 SLC4A1APQ9BWU0 796 aaKnown RBP24.83■■□□□ 1.57
RPAIN-203ENST00000381209 MAST1Q9Y2H9 1570 aa24.83■■□□□ 1.56
RPAIN-203ENST00000381209 SYCP2Q9BX26 1530 aa24.82■■□□□ 1.56
RPAIN-203ENST00000381209 PZPP20742 1482 aa24.82■■□□□ 1.56
RPAIN-203ENST00000381209 ANKRD30BQ9BXX2 1392 aa24.82■■□□□ 1.56
RPAIN-203ENST00000381209 ASXL2Q76L83 1435 aa24.75■■□□□ 1.55
RPAIN-203ENST00000381209 NPM1P06748 294 aaKnown RBP eCLIP24.75■■□□□ 1.55
RPAIN-203ENST00000381209 KDM5DQ9BY66 1539 aa24.74■■□□□ 1.55
RPAIN-203ENST00000381209 ARHGEF12Q9NZN5 1544 aa24.74■■□□□ 1.55
RPAIN-203ENST00000381209 ABCC1P33527 1531 aa24.73■■□□□ 1.55
RPAIN-203ENST00000381209 FOXD1Q16676 465 aa24.72■■□□□ 1.55
RPAIN-203ENST00000381209 RPRD2Q5VT52 1461 aaKnown RBP24.72■■□□□ 1.55
RPAIN-203ENST00000381209 NUP155O75694 1391 aa24.71■■□□□ 1.55
RPAIN-203ENST00000381209 ABCA9Q8IUA7 1624 aa24.7■■□□□ 1.55
RPAIN-203ENST00000381209 PLXNC1O60486 1568 aa24.7■■□□□ 1.54
RPAIN-203ENST00000381209 PKD2Q13563 968 aa24.67■■□□□ 1.54
RPAIN-203ENST00000381209 RTEL1-TNFRSF6BF6WH68 1400 aa24.65■■□□□ 1.54
RPAIN-203ENST00000381209 TRAPPC8Q9Y2L5 1435 aa24.65■■□□□ 1.54
RPAIN-203ENST00000381209 DUOX2Q9NRD8 1548 aa24.63■■□□□ 1.53
RPAIN-203ENST00000381209 FANCAO15360 1455 aa24.63■■□□□ 1.53
RPAIN-203ENST00000381209 L3MBTL2Q969R5 705 aa24.62■■□□□ 1.53
RPAIN-203ENST00000381209 ERBINQ96RT1 1412 aa24.61■■□□□ 1.53
RPAIN-203ENST00000381209 TEX14Q8IWB6 1497 aa24.59■■□□□ 1.53
RPAIN-203ENST00000381209 SPAG9O60271 1321 aaKnown RBP24.59■■□□□ 1.53
RPAIN-203ENST00000381209 MIER1Q8N108 512 aa24.58■■□□□ 1.53
RPAIN-203ENST00000381209 UNC13BO14795 1591 aa24.56■■□□□ 1.52
RPAIN-203ENST00000381209 FAM135AQ9P2D6 1515 aa24.55■■□□□ 1.52
RPAIN-203ENST00000381209 AFAP1Q8N556 730 aa24.54■■□□□ 1.52
RPAIN-203ENST00000381209 ADGRL1O94910 1474 aa24.54■■□□□ 1.52
RPAIN-203ENST00000381209 SCAPERQ9BY12 1400 aa24.52■■□□□ 1.52
RPAIN-203ENST00000381209 ZFYVE16Q7Z3T8 1539 aa24.51■■□□□ 1.51
RPAIN-203ENST00000381209 MAGI2Q86UL8 1455 aa24.51■■□□□ 1.51
RPAIN-203ENST00000381209 CD109Q6YHK3 1445 aa24.5■■□□□ 1.51
RPAIN-203ENST00000381209 IQGAP3Q86VI3 1631 aa24.46■■□□□ 1.51
RPAIN-203ENST00000381209 INO80Q9ULG1 1556 aaPredicted RBP24.45■■□□□ 1.5
RPAIN-203ENST00000381209 ATP7AQ04656 1500 aa24.44■■□□□ 1.5
RPAIN-203ENST00000381209 CFAP74Q9C0B2 1584 aa24.44■■□□□ 1.5
RPAIN-203ENST00000381209 NBPF8Q3BBV2 869 aa24.43■■□□□ 1.5
RPAIN-203ENST00000381209 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.43■■□□□ 1.52e-6■□□□□ 10.3
RPAIN-203ENST00000381209 EIF4G2P78344 907 aaKnown RBP eCLIP24.41■■□□□ 1.5
RPAIN-203ENST00000381209 ZNF518AQ6AHZ1 1483 aa24.41■■□□□ 1.5
RPAIN-203ENST00000381209 CYB5RLQ6IPT4 315 aa24.4■■□□□ 1.5
RPAIN-203ENST00000381209 HIRIP3Q9BW71 556 aaPredicted RBP24.4■■□□□ 1.5
RPAIN-203ENST00000381209 DHX29Q7Z478 1369 aaKnown RBP24.39■■□□□ 1.49
RPAIN-203ENST00000381209 HSPA5P11021 654 aaKnown RBP24.39■■□□□ 1.49
RPAIN-203ENST00000381209 ATP10AO60312 1499 aa24.38■■□□□ 1.49
RPAIN-203ENST00000381209 UHRF1BP1Q6BDS2 1440 aa24.38■■□□□ 1.49
RPAIN-203ENST00000381209 NEO1Q92859 1461 aa24.38■■□□□ 1.49
RPAIN-203ENST00000381209 RIMBP3CA6NJZ7 1639 aa24.37■■□□□ 1.49
RPAIN-203ENST00000381209 RIMBP3BA6NNM3 1639 aa24.37■■□□□ 1.49
RPAIN-203ENST00000381209 RIMBP3Q9UFD9 1639 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms