RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 ZCCHC11Q5TAX3 1644 aaKnown RBP31.61■■■□□ 2.65
GMDS-202ENST00000380815 GCC2Q8IWJ2 1684 aa31.6■■■□□ 2.65
GMDS-202ENST00000380815 ROCK1Q13464 1354 aa31.6■■■□□ 2.65
GMDS-202ENST00000380815 MAPKBP1O60336 1514 aa31.6■■■□□ 2.65
GMDS-202ENST00000380815 CHIC2Q9UKJ5 165 aa31.59■■■□□ 2.65
GMDS-202ENST00000380815 RRP7BPQ9NSQ0 103 aa31.55■■■□□ 2.64
GMDS-202ENST00000380815 ZNF777Q9ULD5 760 aaPredicted RBP31.53■■■□□ 2.64
GMDS-202ENST00000380815 PREX2Q70Z35 1606 aa31.51■■■□□ 2.63
GMDS-202ENST00000380815 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.51■■■□□ 2.63
GMDS-202ENST00000380815 TTC37Q6PGP7 1564 aa31.48■■■□□ 2.63
GMDS-202ENST00000380815 CDC42BPBQ9Y5S2 1711 aa31.46■■■□□ 2.63
GMDS-202ENST00000380815 CROCC2H7BZ55 1655 aa31.46■■■□□ 2.63
GMDS-202ENST00000380815 ACIN1Q9UKV3 1341 aaKnown RBP31.44■■■□□ 2.62
GMDS-202ENST00000380815 ADGRL2O95490 1459 aa31.43■■■□□ 2.62
GMDS-202ENST00000380815 ADGBQ8N7X0 1667 aa31.42■■■□□ 2.62
GMDS-202ENST00000380815 SHANK2Q9UPX8 1470 aa31.41■■■□□ 2.62
GMDS-202ENST00000380815 ARHGEF5Q12774 1597 aa31.4■■■□□ 2.62
GMDS-202ENST00000380815 KCNH8Q96L42 1107 aa31.4■■■□□ 2.62
GMDS-202ENST00000380815 NCOA1Q15788 1441 aa31.4■■■□□ 2.62
GMDS-202ENST00000380815 KDM6BO15054 1643 aa31.39■■■□□ 2.62
GMDS-202ENST00000380815 SAMD9LQ8IVG5 1584 aa31.39■■■□□ 2.62
GMDS-202ENST00000380815 MYO5CQ9NQX4 1742 aa31.39■■■□□ 2.62
GMDS-202ENST00000380815 MBD5Q9P267 1494 aa31.36■■■□□ 2.61
GMDS-202ENST00000380815 ARHGAP5Q13017 1502 aa31.36■■■□□ 2.61
GMDS-202ENST00000380815 WDR7Q9Y4E6 1490 aa31.35■■■□□ 2.61
GMDS-202ENST00000380815 ANKRD30AQ9BXX3 1397 aa31.35■■■□□ 2.61
GMDS-202ENST00000380815 RSPH4AQ5TD94 716 aa31.34■■■□□ 2.61
GMDS-202ENST00000380815 PLCH2O75038 1416 aa31.33■■■□□ 2.61
GMDS-202ENST00000380815 C9orf84Q5VXU9 1444 aa31.31■■■□□ 2.6
GMDS-202ENST00000380815 PLEKHH2Q8IVE3 1493 aa31.3■■■□□ 2.6
GMDS-202ENST00000380815 TSPY4P0CV99 314 aa31.3■■■□□ 2.6
GMDS-202ENST00000380815 TSPY10P0CW01 314 aa31.3■■■□□ 2.6
GMDS-202ENST00000380815 HNRNPMP52272 730 aaKnown RBP eCLIP31.3■■■□□ 2.67e-7■■■■□ 19.3
GMDS-202ENST00000380815 CCDC141Q6ZP82 1450 aa31.29■■■□□ 2.6
GMDS-202ENST00000380815 KIAA1107Q9UPP5 1409 aa31.28■■■□□ 2.6
GMDS-202ENST00000380815 TIMELESSQ9UNS1 1208 aa31.28■■■□□ 2.6
GMDS-202ENST00000380815 TRIM52Q96A61 297 aa31.27■■■□□ 2.6
GMDS-202ENST00000380815 SIN3AQ96ST3 1273 aa31.25■■■□□ 2.59
GMDS-202ENST00000380815 ARAP3Q8WWN8 1544 aa31.25■■■□□ 2.59
GMDS-202ENST00000380815 ASXL2Q76L83 1435 aa31.24■■■□□ 2.59
GMDS-202ENST00000380815 SYCP2Q9BX26 1530 aa31.23■■■□□ 2.59
GMDS-202ENST00000380815 EFCAB2Q5VUJ9 269 aa31.22■■■□□ 2.59
GMDS-202ENST00000380815 ZNF316A6NFI3 1004 aaPredicted RBP31.21■■■□□ 2.59
GMDS-202ENST00000380815 NPM1P06748 294 aaKnown RBP eCLIP31.21■■■□□ 2.59
GMDS-202ENST00000380815 DENND4BO75064 1496 aaPredicted RBP31.21■■■□□ 2.59
GMDS-202ENST00000380815 MPHOSPH9Q99550 1183 aa31.2■■■□□ 2.58
GMDS-202ENST00000380815 NEUROD1Q13562 356 aa31.19■■■□□ 2.58
GMDS-202ENST00000380815 ANKRD50Q9ULJ7 1429 aa31.18■■■□□ 2.58
GMDS-202ENST00000380815 ABCA9Q8IUA7 1624 aa31.18■■■□□ 2.58
GMDS-202ENST00000380815 MAST1Q9Y2H9 1570 aa31.17■■■□□ 2.58
GMDS-202ENST00000380815 KIF15Q9NS87 1388 aa31.13■■■□□ 2.57
GMDS-202ENST00000380815 ABCC1P33527 1531 aa31.13■■■□□ 2.57
GMDS-202ENST00000380815 ARHGEF12Q9NZN5 1544 aa31.12■■■□□ 2.57
GMDS-202ENST00000380815 PZPP20742 1482 aa31.06■■■□□ 2.56
GMDS-202ENST00000380815 SLC4A1APQ9BWU0 796 aaKnown RBP31.05■■■□□ 2.56
GMDS-202ENST00000380815 PLXNC1O60486 1568 aa31.04■■■□□ 2.56
GMDS-202ENST00000380815 TONSLQ96HA7 1378 aa31.03■■■□□ 2.56
GMDS-202ENST00000380815 FANCAO15360 1455 aa31.03■■■□□ 2.56
GMDS-202ENST00000380815 TRAPPC8Q9Y2L5 1435 aa31■■■□□ 2.55
GMDS-202ENST00000380815 PPP1R15AO75807 674 aaPredicted RBP31■■■□□ 2.55
GMDS-202ENST00000380815 RIMBP3CA6NJZ7 1639 aa30.99■■■□□ 2.55
GMDS-202ENST00000380815 RIMBP3BA6NNM3 1639 aa30.99■■■□□ 2.55
GMDS-202ENST00000380815 ANKRD30BQ9BXX2 1392 aa30.99■■■□□ 2.55
GMDS-202ENST00000380815 RIMBP3Q9UFD9 1639 aa30.99■■■□□ 2.55
GMDS-202ENST00000380815 KDM5DQ9BY66 1539 aa30.99■■■□□ 2.55
GMDS-202ENST00000380815 DIEXFQ68CQ4 756 aaKnown RBP30.96■■■□□ 2.55
GMDS-202ENST00000380815 FOXD1Q16676 465 aa30.94■■■□□ 2.54
GMDS-202ENST00000380815 NUP155O75694 1391 aa30.94■■■□□ 2.54
GMDS-202ENST00000380815 RTEL1-TNFRSF6BF6WH68 1400 aa30.93■■■□□ 2.54
GMDS-202ENST00000380815 CYB5RLQ6IPT4 315 aa30.92■■■□□ 2.54
GMDS-202ENST00000380815 DUOX2Q9NRD8 1548 aa30.92■■■□□ 2.54
GMDS-202ENST00000380815 ADGRL1O94910 1474 aa30.9■■■□□ 2.54
GMDS-202ENST00000380815 SPAG9O60271 1321 aaKnown RBP30.88■■■□□ 2.53
GMDS-202ENST00000380815 CD109Q6YHK3 1445 aa30.88■■■□□ 2.53
GMDS-202ENST00000380815 RPRD2Q5VT52 1461 aaKnown RBP30.88■■■□□ 2.53
GMDS-202ENST00000380815 ERBINQ96RT1 1412 aa30.88■■■□□ 2.53
GMDS-202ENST00000380815 AFAP1Q8N556 730 aa30.87■■■□□ 2.53
GMDS-202ENST00000380815 SCAPERQ9BY12 1400 aa30.86■■■□□ 2.53
GMDS-202ENST00000380815 PKD2Q13563 968 aa30.86■■■□□ 2.53
GMDS-202ENST00000380815 ZFYVE16Q7Z3T8 1539 aa30.86■■■□□ 2.53
GMDS-202ENST00000380815 UNC13BO14795 1591 aa30.85■■■□□ 2.53
GMDS-202ENST00000380815 CFAP74Q9C0B2 1584 aa30.84■■■□□ 2.53
GMDS-202ENST00000380815 FAM135AQ9P2D6 1515 aa30.8■■■□□ 2.52
GMDS-202ENST00000380815 INO80Q9ULG1 1556 aaPredicted RBP30.8■■■□□ 2.52
GMDS-202ENST00000380815 ATP7AQ04656 1500 aa30.78■■■□□ 2.52
GMDS-202ENST00000380815 MAGI2Q86UL8 1455 aa30.76■■■□□ 2.51
GMDS-202ENST00000380815 ZNF518AQ6AHZ1 1483 aa30.74■■■□□ 2.51
GMDS-202ENST00000380815 L3MBTL2Q969R5 705 aa30.73■■■□□ 2.51
GMDS-202ENST00000380815 TEX14Q8IWB6 1497 aa30.72■■■□□ 2.51
GMDS-202ENST00000380815 IQGAP3Q86VI3 1631 aa30.72■■■□□ 2.51
GMDS-202ENST00000380815 NEO1Q92859 1461 aa30.72■■■□□ 2.51
GMDS-202ENST00000380815 GLI2P10070 1586 aa30.71■■■□□ 2.51
GMDS-202ENST00000380815 MAP3K4Q9Y6R4 1608 aa30.68■■■□□ 2.5
GMDS-202ENST00000380815 POGZQ7Z3K3 1410 aa30.68■■■□□ 2.5
GMDS-202ENST00000380815 KDM5CP41229 1560 aa30.65■■■□□ 2.5
GMDS-202ENST00000380815 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.65■■■□□ 2.54e-7■■□□□ 13.9
GMDS-202ENST00000380815 KIDINS220Q9ULH0 1771 aa30.63■■■□□ 2.49
GMDS-202ENST00000380815 DHX29Q7Z478 1369 aaKnown RBP30.61■■■□□ 2.49
GMDS-202ENST00000380815 MYT1LQ9UL68 1186 aa30.61■■■□□ 2.49
GMDS-202ENST00000380815 MLH3Q9UHC1 1453 aa30.6■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms