RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 UACAQ9BZF9 1416 aa11.51□□□□□ -0.57
PDLIM5-204ENST00000380176 PLB1Q6P1J6 1458 aa11.49□□□□□ -0.57
PDLIM5-204ENST00000380176 KDM6BO15054 1643 aa11.49□□□□□ -0.57
PDLIM5-204ENST00000380176 NUP160Q12769 1436 aa11.49□□□□□ -0.57
PDLIM5-204ENST00000380176 MIA2Q96PC5 1412 aa11.49□□□□□ -0.57
PDLIM5-204ENST00000380176 GCC2Q8IWJ2 1684 aa11.48□□□□□ -0.57
PDLIM5-204ENST00000380176 JPH4Q96JJ6 628 aa11.48□□□□□ -0.57
PDLIM5-204ENST00000380176 TAOK2Q9UL54 1235 aa11.48□□□□□ -0.57
PDLIM5-204ENST00000380176 TIMELESSQ9UNS1 1208 aa11.48□□□□□ -0.57
PDLIM5-204ENST00000380176 PPP1R15AO75807 674 aaPredicted RBP11.46□□□□□ -0.57
PDLIM5-204ENST00000380176 GTF3C3Q9Y5Q9 886 aa11.46□□□□□ -0.57
PDLIM5-204ENST00000380176 ZNF644Q9H582 1327 aaPredicted RBP11.46□□□□□ -0.57
PDLIM5-204ENST00000380176 PRG4Q92954 1404 aaPredicted RBP11.46□□□□□ -0.57
PDLIM5-204ENST00000380176 DENND4BO75064 1496 aaPredicted RBP11.44□□□□□ -0.58
PDLIM5-204ENST00000380176 HIRIP3Q9BW71 556 aaPredicted RBP11.44□□□□□ -0.58
PDLIM5-204ENST00000380176 CARMIL2Q6F5E8 1435 aa11.43□□□□□ -0.58
PDLIM5-204ENST00000380176 CDK11AQ9UQ88 783 aaPredicted RBP11.43□□□□□ -0.58
PDLIM5-204ENST00000380176 DAPK1P53355 1430 aa11.43□□□□□ -0.58
PDLIM5-204ENST00000380176 KIF14Q15058 1648 aa11.43□□□□□ -0.58
PDLIM5-204ENST00000380176 TONSLQ96HA7 1378 aa11.42□□□□□ -0.58
PDLIM5-204ENST00000380176 AKNAQ7Z591 1439 aa11.42□□□□□ -0.58
PDLIM5-204ENST00000380176 DNMT1P26358 1616 aaKnown RBP11.42□□□□□ -0.58
PDLIM5-204ENST00000380176 TROQ12816 1431 aaPredicted RBP11.42□□□□□ -0.58
PDLIM5-204ENST00000380176 ERICH6Q7L0X2 663 aa11.42□□□□□ -0.58
PDLIM5-204ENST00000380176 TRIM52Q96A61 297 aa11.42□□□□□ -0.58
PDLIM5-204ENST00000380176 ABCC5O15440 1437 aa11.42□□□□□ -0.58
PDLIM5-204ENST00000380176 KDM5BQ9UGL1 1544 aa11.39□□□□□ -0.59
PDLIM5-204ENST00000380176 FKBP8Q14318 412 aa11.39□□□□□ -0.59
PDLIM5-204ENST00000380176 ABCA8O94911 1581 aa11.39□□□□□ -0.59
PDLIM5-204ENST00000380176 ADCY10Q96PN6 1610 aa11.39□□□□□ -0.59
PDLIM5-204ENST00000380176 DDX10Q13206 875 aaKnown RBP11.39□□□□□ -0.59
PDLIM5-204ENST00000380176 GPATCH8Q9UKJ3 1502 aaKnown RBP11.38□□□□□ -0.59
PDLIM5-204ENST00000380176 MPHOSPH9Q99550 1183 aa11.38□□□□□ -0.59
PDLIM5-204ENST00000380176 CHD1O14646 1710 aa11.38□□□□□ -0.59
PDLIM5-204ENST00000380176 CAMSAP2Q08AD1 1489 aa11.38□□□□□ -0.59
PDLIM5-204ENST00000380176 ITSN2Q9NZM3 1697 aa11.37□□□□□ -0.59
PDLIM5-204ENST00000380176 CFDP1Q9UEE9 299 aaPredicted RBP11.37□□□□□ -0.59
PDLIM5-204ENST00000380176 ROCK1Q13464 1354 aa11.37□□□□□ -0.59
PDLIM5-204ENST00000380176 ATP10BO94823 1461 aa11.37□□□□□ -0.59
PDLIM5-204ENST00000380176 ZNF777Q9ULD5 760 aaPredicted RBP11.37□□□□□ -0.59
PDLIM5-204ENST00000380176 TPRNQ4KMQ1 711 aa11.36□□□□□ -0.59
PDLIM5-204ENST00000380176 KCNH8Q96L42 1107 aa11.36□□□□□ -0.59
PDLIM5-204ENST00000380176 PLCB2Q00722 1185 aa11.35□□□□□ -0.59
PDLIM5-204ENST00000380176 CDC42BPAQ5VT25 1732 aa11.35□□□□□ -0.59
PDLIM5-204ENST00000380176 PLEKHD1A6NEE1 506 aa11.34□□□□□ -0.59
PDLIM5-204ENST00000380176 CROCC2H7BZ55 1655 aa11.32□□□□□ -0.6
PDLIM5-204ENST00000380176 ADGBQ8N7X0 1667 aa11.32□□□□□ -0.6
PDLIM5-204ENST00000380176 ABCC10Q5T3U5 1492 aa11.32□□□□□ -0.6
PDLIM5-204ENST00000380176 TULP1O00294 542 aaPredicted RBP11.32□□□□□ -0.6
PDLIM5-204ENST00000380176 PTPRGP23470 1445 aa11.32□□□□□ -0.6
PDLIM5-204ENST00000380176 NCOA1Q15788 1441 aa11.32□□□□□ -0.6
PDLIM5-204ENST00000380176 ANKRD30BQ9BXX2 1392 aa11.3□□□□□ -0.6
PDLIM5-204ENST00000380176 L3MBTL2Q969R5 705 aa11.29□□□□□ -0.6
PDLIM5-204ENST00000380176 HAP1P54257 671 aaPredicted RBP11.29□□□□□ -0.6
PDLIM5-204ENST00000380176 ERCC6L2Q5T890 1561 aa11.28□□□□□ -0.6
PDLIM5-204ENST00000380176 PZPP20742 1482 aa11.28□□□□□ -0.6
PDLIM5-204ENST00000380176 BCANQ96GW7 911 aa11.28□□□□□ -0.6
PDLIM5-204ENST00000380176 ADGRL2O95490 1459 aa11.28□□□□□ -0.6
PDLIM5-204ENST00000380176 SHROOM2Q13796 1616 aa11.28□□□□□ -0.6
PDLIM5-204ENST00000380176 RPRD2Q5VT52 1461 aaKnown RBP11.27□□□□□ -0.61
PDLIM5-204ENST00000380176 CDC42BPBQ9Y5S2 1711 aa11.25□□□□□ -0.61
PDLIM5-204ENST00000380176 ANKRD30AQ9BXX3 1397 aa11.25□□□□□ -0.61
PDLIM5-204ENST00000380176 HSPA5P11021 654 aaKnown RBP11.25□□□□□ -0.61
PDLIM5-204ENST00000380176 HNRNPMP52272 730 aaKnown RBP eCLIP11.25□□□□□ -0.61
PDLIM5-204ENST00000380176 TEX14Q8IWB6 1497 aa11.24□□□□□ -0.61
PDLIM5-204ENST00000380176 NBPF8Q3BBV2 869 aa11.24□□□□□ -0.61
PDLIM5-204ENST00000380176 C9orf84Q5VXU9 1444 aa11.24□□□□□ -0.61
PDLIM5-204ENST00000380176 ANKRD50Q9ULJ7 1429 aa11.23□□□□□ -0.61
PDLIM5-204ENST00000380176 SAMD9LQ8IVG5 1584 aa11.22□□□□□ -0.61
PDLIM5-204ENST00000380176 PREX2Q70Z35 1606 aa11.22□□□□□ -0.61
PDLIM5-204ENST00000380176 WASHC2AQ641Q2 1341 aa11.22□□□□□ -0.61
PDLIM5-204ENST00000380176 MBD5Q9P267 1494 aa11.22□□□□□ -0.61
PDLIM5-204ENST00000380176 SHANK2Q9UPX8 1470 aa11.22□□□□□ -0.61
PDLIM5-204ENST00000380176 PKD2Q13563 968 aa11.21□□□□□ -0.61
PDLIM5-204ENST00000380176 ANP32CO43423 234 aa11.21□□□□□ -0.62
PDLIM5-204ENST00000380176 EIF4G2P78344 907 aaKnown RBP eCLIP11.21□□□□□ -0.62
PDLIM5-204ENST00000380176 TTC37Q6PGP7 1564 aa11.21□□□□□ -0.62
PDLIM5-204ENST00000380176 KIAA1107Q9UPP5 1409 aa11.2□□□□□ -0.62
PDLIM5-204ENST00000380176 TSPY4P0CV99 314 aa11.2□□□□□ -0.62
PDLIM5-204ENST00000380176 TSPY10P0CW01 314 aa11.2□□□□□ -0.62
PDLIM5-204ENST00000380176 ARHGEF5Q12774 1597 aa11.2□□□□□ -0.62
PDLIM5-204ENST00000380176 C11orf95C9JLR9 678 aaPredicted RBP11.19□□□□□ -0.62
PDLIM5-204ENST00000380176 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.19□□□□□ -0.62
PDLIM5-204ENST00000380176 ABCC2Q92887 1545 aa11.19□□□□□ -0.62
PDLIM5-204ENST00000380176 NUP155O75694 1391 aa11.18□□□□□ -0.62
PDLIM5-204ENST00000380176 KIF15Q9NS87 1388 aa11.18□□□□□ -0.62
PDLIM5-204ENST00000380176 CLASP1Q7Z460 1538 aa11.18□□□□□ -0.62
PDLIM5-204ENST00000380176 CCER2I3L3R5 266 aa11.17□□□□□ -0.62
PDLIM5-204ENST00000380176 CCDC141Q6ZP82 1450 aa11.17□□□□□ -0.62
PDLIM5-204ENST00000380176 SYCP2Q9BX26 1530 aa11.17□□□□□ -0.62
PDLIM5-204ENST00000380176 ARHGAP5Q13017 1502 aa11.16□□□□□ -0.62
PDLIM5-204ENST00000380176 CNKSR2Q8WXI2 1034 aa11.16□□□□□ -0.62
PDLIM5-204ENST00000380176 MYO5CQ9NQX4 1742 aa11.15□□□□□ -0.62
PDLIM5-204ENST00000380176 ZCCHC11Q5TAX3 1644 aaKnown RBP11.15□□□□□ -0.63
PDLIM5-204ENST00000380176 KDM5DQ9BY66 1539 aa11.15□□□□□ -0.63
PDLIM5-204ENST00000380176 SPATA31E1Q6ZUB1 1445 aa11.14□□□□□ -0.63
PDLIM5-204ENST00000380176 ZNF326Q5BKZ1 582 aaKnown RBP11.13□□□□□ -0.63
PDLIM5-204ENST00000380176 CCDC7Q96M83 1385 aa11.13□□□□□ -0.63
PDLIM5-204ENST00000380176 FOXD4L1Q9NU39 408 aa11.12□□□□□ -0.63
PDLIM5-204ENST00000380176 SUPT16HQ9Y5B9 1047 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms