RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 TRIM52Q96A61 297 aa10.26□□□□□ -0.77
CDKL5-201ENST00000379989 RAPGEF6Q8TEU7 1601 aa10.26□□□□□ -0.77
CDKL5-201ENST00000379989 MYOM3Q5VTT5 1437 aa10.26□□□□□ -0.77
CDKL5-201ENST00000379989 ADCY10Q96PN6 1610 aa10.26□□□□□ -0.77
CDKL5-201ENST00000379989 FGD6Q6ZV73 1430 aa10.26□□□□□ -0.77
CDKL5-201ENST00000379989 MTUS2Q5JR59 1369 aa10.25□□□□□ -0.77
CDKL5-201ENST00000379989 EPRSP07814 1512 aaKnown RBP10.25□□□□□ -0.77
CDKL5-201ENST00000379989 DISP1Q96F81 1524 aa10.25□□□□□ -0.77
CDKL5-201ENST00000379989 A0A0U1RQG5 324 aaPredicted RBP10.25□□□□□ -0.77
CDKL5-201ENST00000379989 HNRNPUL2Q1KMD3 747 aaKnown RBP10.25□□□□□ -0.77
CDKL5-201ENST00000379989 LRRIQ1Q96JM4 1722 aa10.25□□□□□ -0.77
CDKL5-201ENST00000379989 IRX6P78412 446 aaPredicted RBP10.25□□□□□ -0.77
CDKL5-201ENST00000379989 SETD5Q9C0A6 1442 aa10.24□□□□□ -0.77
CDKL5-201ENST00000379989 DHX57Q6P158 1386 aaKnown RBP10.24□□□□□ -0.77
CDKL5-201ENST00000379989 IPO9Q96P70 1041 aaKnown RBP10.24□□□□□ -0.77
CDKL5-201ENST00000379989 FGD1P98174 961 aa10.23□□□□□ -0.77
CDKL5-201ENST00000379989 ITSN2Q9NZM3 1697 aa10.23□□□□□ -0.77
CDKL5-201ENST00000379989 CEP170Q5SW79 1584 aa10.23□□□□□ -0.77
CDKL5-201ENST00000379989 NCOA2Q15596 1464 aa10.23□□□□□ -0.77
CDKL5-201ENST00000379989 AAMPQ13685 434 aa10.22□□□□□ -0.77
CDKL5-201ENST00000379989 PHLDB1Q86UU1 1377 aa10.22□□□□□ -0.77
CDKL5-201ENST00000379989 PDE4CQ08493 712 aa10.21□□□□□ -0.77
CDKL5-201ENST00000379989 SHROOM2Q13796 1616 aa10.21□□□□□ -0.77
CDKL5-201ENST00000379989 RBM10P98175 930 aaKnown RBP10.21□□□□□ -0.77
CDKL5-201ENST00000379989 CLASP1Q7Z460 1538 aa10.21□□□□□ -0.78
CDKL5-201ENST00000379989 ZBTB47Q9UFB7 747 aaPredicted RBP10.21□□□□□ -0.78
CDKL5-201ENST00000379989 PTPN23Q9H3S7 1636 aa10.2□□□□□ -0.78
CDKL5-201ENST00000379989 GCC2Q8IWJ2 1684 aa10.2□□□□□ -0.78
CDKL5-201ENST00000379989 HFM1A2PYH4 1435 aa10.2□□□□□ -0.78
CDKL5-201ENST00000379989 PPP4R2Q9NY27 417 aa10.19□□□□□ -0.78
CDKL5-201ENST00000379989 USP35Q9P2H5 1018 aa10.19□□□□□ -0.78
CDKL5-201ENST00000379989 ABCA8O94911 1581 aa10.18□□□□□ -0.78
CDKL5-201ENST00000379989 NEFMP07197 916 aa10.18□□□□□ -0.78
CDKL5-201ENST00000379989 ANP32AP39687 249 aaKnown RBP10.17□□□□□ -0.78
CDKL5-201ENST00000379989 CHMP7Q8WUX9 453 aaPredicted RBP10.17□□□□□ -0.78
CDKL5-201ENST00000379989 ROCK1Q13464 1354 aa10.17□□□□□ -0.78
CDKL5-201ENST00000379989 RANGAP1P46060 587 aaPredicted RBP10.17□□□□□ -0.78
CDKL5-201ENST00000379989 TROQ12816 1431 aaPredicted RBP10.16□□□□□ -0.78
CDKL5-201ENST00000379989 FAM43AQ8N2R8 423 aa10.16□□□□□ -0.78
CDKL5-201ENST00000379989 NUP153P49790 1475 aaKnown RBP10.16□□□□□ -0.78
CDKL5-201ENST00000379989 PDIA4P13667 645 aaKnown RBP10.15□□□□□ -0.79
CDKL5-201ENST00000379989 MAPKBP1O60336 1514 aa10.14□□□□□ -0.79
CDKL5-201ENST00000379989 RAB3GAP2Q9H2M9 1393 aa10.14□□□□□ -0.79
CDKL5-201ENST00000379989 DNMT1P26358 1616 aaKnown RBP10.13□□□□□ -0.79
CDKL5-201ENST00000379989 UACAQ9BZF9 1416 aa10.13□□□□□ -0.79
CDKL5-201ENST00000379989 B4GALNT3Q6L9W6 998 aa10.13□□□□□ -0.79
CDKL5-201ENST00000379989 GSE1Q14687 1217 aa10.12□□□□□ -0.79
CDKL5-201ENST00000379989 LAS1LQ9Y4W2 734 aaKnown RBP10.12□□□□□ -0.79
CDKL5-201ENST00000379989 MAGI3Q5TCQ9 1506 aa10.12□□□□□ -0.79
CDKL5-201ENST00000379989 CCER2I3L3R5 266 aa10.12□□□□□ -0.79
CDKL5-201ENST00000379989 BCL11BQ9C0K0 894 aaPredicted RBP10.12□□□□□ -0.79
CDKL5-201ENST00000379989 ADGBQ8N7X0 1667 aa10.11□□□□□ -0.79
CDKL5-201ENST00000379989 SHANK2Q9UPX8 1470 aa10.11□□□□□ -0.79
CDKL5-201ENST00000379989 KIF14Q15058 1648 aa10.11□□□□□ -0.79
CDKL5-201ENST00000379989 DDX10Q13206 875 aaKnown RBP10.11□□□□□ -0.79
CDKL5-201ENST00000379989 JPH4Q96JJ6 628 aa10.1□□□□□ -0.79
CDKL5-201ENST00000379989 UHRF1BP1LA0JNW5 1464 aa10.1□□□□□ -0.79
CDKL5-201ENST00000379989 HSP90AA2PQ14568 343 aaPredicted RBP10.1□□□□□ -0.79
CDKL5-201ENST00000379989 P3H3Q8IVL6 736 aa10.1□□□□□ -0.79
CDKL5-201ENST00000379989 ADGRL2O95490 1459 aa10.1□□□□□ -0.79
CDKL5-201ENST00000379989 RRP9O43818 475 aaKnown RBP10.09□□□□□ -0.79
CDKL5-201ENST00000379989 CROCC2H7BZ55 1655 aa10.08□□□□□ -0.8
CDKL5-201ENST00000379989 ARHGEF5Q12774 1597 aa10.08□□□□□ -0.8
CDKL5-201ENST00000379989 NAIPQ13075 1403 aa10.08□□□□□ -0.8
CDKL5-201ENST00000379989 CDK13Q14004 1512 aaKnown RBP10.07□□□□□ -0.8
CDKL5-201ENST00000379989 RSPH4AQ5TD94 716 aa10.07□□□□□ -0.8
CDKL5-201ENST00000379989 PPP1R15AO75807 674 aaPredicted RBP10.06□□□□□ -0.8
CDKL5-201ENST00000379989 FRAT1Q92837 279 aaPredicted RBP10.06□□□□□ -0.8
CDKL5-201ENST00000379989 PLEKHH2Q8IVE3 1493 aa10.06□□□□□ -0.8
CDKL5-201ENST00000379989 FAM50AQ14320 339 aaKnown RBP10.06□□□□□ -0.8
CDKL5-201ENST00000379989 ARAP3Q8WWN8 1544 aa10.06□□□□□ -0.8
CDKL5-201ENST00000379989 ATP1B4Q9UN42 357 aaPredicted RBP10.05□□□□□ -0.8
CDKL5-201ENST00000379989 PPM1GO15355 546 aaPredicted RBP10.05□□□□□ -0.8
CDKL5-201ENST00000379989 ABCC2Q92887 1545 aa10.04□□□□□ -0.8
CDKL5-201ENST00000379989 DAPK1P53355 1430 aa10.04□□□□□ -0.8
CDKL5-201ENST00000379989 PTPRGP23470 1445 aa10.04□□□□□ -0.8
CDKL5-201ENST00000379989 ABCC10Q5T3U5 1492 aa10.04□□□□□ -0.8
CDKL5-201ENST00000379989 PRG4Q92954 1404 aaPredicted RBP10.04□□□□□ -0.8
CDKL5-201ENST00000379989 DCAF11Q8TEB1 546 aa10.03□□□□□ -0.8
CDKL5-201ENST00000379989 MAST1Q9Y2H9 1570 aa10.03□□□□□ -0.8
CDKL5-201ENST00000379989 GPATCH8Q9UKJ3 1502 aaKnown RBP10.02□□□□□ -0.8
CDKL5-201ENST00000379989 HNRNPUQ00839 825 aaKnown RBP eCLIP10.02□□□□□ -0.8
CDKL5-201ENST00000379989 RIMBP3CA6NJZ7 1639 aa10.02□□□□□ -0.81
CDKL5-201ENST00000379989 RIMBP3BA6NNM3 1639 aa10.02□□□□□ -0.81
CDKL5-201ENST00000379989 RIMBP3Q9UFD9 1639 aa10.02□□□□□ -0.81
CDKL5-201ENST00000379989 RRAGDQ9NQL2 400 aaPredicted RBP10.02□□□□□ -0.81
CDKL5-201ENST00000379989 ATP10BO94823 1461 aa10.02□□□□□ -0.81
CDKL5-201ENST00000379989 PREX2Q70Z35 1606 aa10.02□□□□□ -0.81
CDKL5-201ENST00000379989 ANP32CO43423 234 aa10.02□□□□□ -0.81
CDKL5-201ENST00000379989 CDC42BPAQ5VT25 1732 aa10.02□□□□□ -0.81
CDKL5-201ENST00000379989 PLEKHD1A6NEE1 506 aa10.01□□□□□ -0.81
CDKL5-201ENST00000379989 CAMSAP2Q08AD1 1489 aa10.01□□□□□ -0.81
CDKL5-201ENST00000379989 PLB1Q6P1J6 1458 aa10.01□□□□□ -0.81
CDKL5-201ENST00000379989 HSP90AA1P07900 732 aaKnown RBP10.01□□□□□ -0.81
CDKL5-201ENST00000379989 PRDM4Q9UKN5 801 aa10.01□□□□□ -0.81
CDKL5-201ENST00000379989 KDM5DQ9BY66 1539 aa10□□□□□ -0.81
CDKL5-201ENST00000379989 ABCC5O15440 1437 aa9.99□□□□□ -0.81
CDKL5-201ENST00000379989 PTPRKQ15262 1439 aa9.99□□□□□ -0.81
CDKL5-201ENST00000379989 KDM5BQ9UGL1 1544 aa9.99□□□□□ -0.81
CDKL5-201ENST00000379989 KIAA1107Q9UPP5 1409 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms