RNA–Protein interactions for RNA: ENST00000378735.5

KIF3A-201, Transcript of kinesin family member 3A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene KIF3A, Length 3,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-201ENST00000378735 MRS2Q9HD23 443 aa18.53■□□□□ 0.56
KIF3A-201ENST00000378735 MAGI1Q96QZ7 1491 aaPredicted RBP18.53■□□□□ 0.56
KIF3A-201ENST00000378735 FMN1Q68DA7 1419 aa18.53■□□□□ 0.56
KIF3A-201ENST00000378735 C11orf95C9JLR9 678 aaPredicted RBP18.52■□□□□ 0.56
KIF3A-201ENST00000378735 CCDC7Q96M83 1385 aa18.52■□□□□ 0.56
KIF3A-201ENST00000378735 FAM9BQ8IZU0 186 aa18.51■□□□□ 0.55
KIF3A-201ENST00000378735 HECW1Q76N89 1606 aa18.5■□□□□ 0.55
KIF3A-201ENST00000378735 PTPRKQ15262 1439 aa18.5■□□□□ 0.55
KIF3A-201ENST00000378735 CCDC136Q96JN2 1154 aa18.5■□□□□ 0.55
KIF3A-201ENST00000378735 IQGAP2Q13576 1575 aa18.49■□□□□ 0.55
KIF3A-201ENST00000378735 NUDCQ9Y266 331 aa18.48■□□□□ 0.55
KIF3A-201ENST00000378735 SNAPC4Q5SXM2 1469 aa18.47■□□□□ 0.55
KIF3A-201ENST00000378735 IL27Q8NEV9 243 aa18.47■□□□□ 0.55
KIF3A-201ENST00000378735 WASHC2CQ9Y4E1 1318 aa18.47■□□□□ 0.55
KIF3A-201ENST00000378735 GCC2Q8IWJ2 1684 aa18.44■□□□□ 0.54
KIF3A-201ENST00000378735 FHOD3Q2V2M9 1422 aa18.44■□□□□ 0.54
KIF3A-201ENST00000378735 AKNAQ7Z591 1439 aa18.44■□□□□ 0.54
KIF3A-201ENST00000378735 UGGT2Q9NYU1 1516 aa18.44■□□□□ 0.54
KIF3A-201ENST00000378735 GRIN2AQ12879 1464 aa18.44■□□□□ 0.54
KIF3A-201ENST00000378735 SYNJ2O15056 1496 aa18.42■□□□□ 0.54
KIF3A-201ENST00000378735 KIAA0586Q9BVV6 1533 aa18.42■□□□□ 0.54
KIF3A-201ENST00000378735 UBE2Q2Q8WVN8 375 aa18.42■□□□□ 0.54
KIF3A-201ENST00000378735 PPM1GO15355 546 aaPredicted RBP18.41■□□□□ 0.54
KIF3A-201ENST00000378735 MYOM3Q5VTT5 1437 aa18.41■□□□□ 0.54
KIF3A-201ENST00000378735 TCERG1O14776 1098 aaKnown RBP18.39■□□□□ 0.53
KIF3A-201ENST00000378735 DENND4BO75064 1496 aaPredicted RBP18.38■□□□□ 0.53
KIF3A-201ENST00000378735 MTUS2Q5JR59 1369 aa18.37■□□□□ 0.53
KIF3A-201ENST00000378735 SUPT6HQ7KZ85 1726 aaKnown RBP18.37■□□□□ 0.53
KIF3A-201ENST00000378735 SPATA31E1Q6ZUB1 1445 aa18.36■□□□□ 0.53
KIF3A-201ENST00000378735 ATP1B4Q9UN42 357 aaPredicted RBP18.36■□□□□ 0.53
KIF3A-201ENST00000378735 NEFMP07197 916 aa18.36■□□□□ 0.53
KIF3A-201ENST00000378735 MS4A1P11836 297 aa18.35■□□□□ 0.53
KIF3A-201ENST00000378735 KIF7Q2M1P5 1343 aa18.33■□□□□ 0.52
KIF3A-201ENST00000378735 EHBP1L1Q8N3D4 1523 aa18.33■□□□□ 0.52
KIF3A-201ENST00000378735 NUP160Q12769 1436 aa18.32■□□□□ 0.52
KIF3A-201ENST00000378735 TCOF1Q13428 1488 aaKnown RBP18.32■□□□□ 0.52
KIF3A-201ENST00000378735 P3H3Q8IVL6 736 aa18.32■□□□□ 0.52
KIF3A-201ENST00000378735 ARHGEF11O15085 1522 aa18.31■□□□□ 0.52
KIF3A-201ENST00000378735 L3MBTL2Q969R5 705 aa18.31■□□□□ 0.52
KIF3A-201ENST00000378735 KIAA0556O60303 1618 aa18.3■□□□□ 0.52
KIF3A-201ENST00000378735 CEP170Q5SW79 1584 aa18.3■□□□□ 0.52
KIF3A-201ENST00000378735 MIA2Q96PC5 1412 aa18.3■□□□□ 0.52
KIF3A-201ENST00000378735 RTN4Q9NQC3 1192 aaKnown RBP18.3■□□□□ 0.52
KIF3A-201ENST00000378735 DHX29Q7Z478 1369 aaKnown RBP18.29■□□□□ 0.52
KIF3A-201ENST00000378735 RPRD2Q5VT52 1461 aaKnown RBP18.28■□□□□ 0.52
KIF3A-201ENST00000378735 BACH2Q9BYV9 841 aa18.28■□□□□ 0.52
KIF3A-201ENST00000378735 LRRIQ1Q96JM4 1722 aa18.28■□□□□ 0.52
KIF3A-201ENST00000378735 PDE4AP27815 886 aa18.27■□□□□ 0.52
KIF3A-201ENST00000378735 TEX14Q8IWB6 1497 aa18.27■□□□□ 0.52
KIF3A-201ENST00000378735 DISP1Q96F81 1524 aa18.27■□□□□ 0.51
KIF3A-201ENST00000378735 DDRGK1Q96HY6 314 aa18.27■□□□□ 0.51
KIF3A-201ENST00000378735 ARID4BQ4LE39 1312 aaPredicted RBP18.26■□□□□ 0.51
KIF3A-201ENST00000378735 CHMP7Q8WUX9 453 aaPredicted RBP18.25■□□□□ 0.51
KIF3A-201ENST00000378735 MPHOSPH9Q99550 1183 aa18.24■□□□□ 0.51
KIF3A-201ENST00000378735 LAS1LQ9Y4W2 734 aaKnown RBP18.24■□□□□ 0.51
KIF3A-201ENST00000378735 GSE1Q14687 1217 aa18.24■□□□□ 0.51
KIF3A-201ENST00000378735 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.22■□□□□ 0.51
KIF3A-201ENST00000378735 ANKRD30BQ9BXX2 1392 aa18.22■□□□□ 0.51
KIF3A-201ENST00000378735 NPM2Q86SE8 214 aaKnown RBP18.22■□□□□ 0.51
KIF3A-201ENST00000378735 RRP1P56182 461 aaKnown RBP18.21■□□□□ 0.51
KIF3A-201ENST00000378735 PNISRQ8TF01 805 aaKnown RBP18.21■□□□□ 0.51
KIF3A-201ENST00000378735 KDM6BO15054 1643 aa18.21■□□□□ 0.51
KIF3A-201ENST00000378735 NBPF8Q3BBV2 869 aa18.21■□□□□ 0.51
KIF3A-201ENST00000378735 LRPPRCP42704 1394 aaKnown RBP18.2■□□□□ 0.5
KIF3A-201ENST00000378735 RRP7BPQ9NSQ0 103 aa18.18■□□□□ 0.5
KIF3A-201ENST00000378735 ROCK2O75116 1388 aaKnown RBP18.18■□□□□ 0.5
KIF3A-201ENST00000378735 KTN1Q86UP2 1357 aaKnown RBP18.17■□□□□ 0.5
KIF3A-201ENST00000378735 EPRSP07814 1512 aaKnown RBP18.17■□□□□ 0.5
KIF3A-201ENST00000378735 CARMIL2Q6F5E8 1435 aa18.17■□□□□ 0.5
KIF3A-201ENST00000378735 RAPGEF6Q8TEU7 1601 aa18.15■□□□□ 0.5
KIF3A-201ENST00000378735 BRPF3Q9ULD4 1205 aa18.15■□□□□ 0.5
KIF3A-201ENST00000378735 EXOC6Q8TAG9 804 aa18.14■□□□□ 0.49
KIF3A-201ENST00000378735 RSPH6AQ9H0K4 717 aa18.13■□□□□ 0.49
KIF3A-201ENST00000378735 BRD4O60885 1362 aaPredicted RBP18.13■□□□□ 0.49
KIF3A-201ENST00000378735 BCORL1Q5H9F3 1711 aa18.13■□□□□ 0.49
KIF3A-201ENST00000378735 PDE3BQ13370 1112 aa18.13■□□□□ 0.49
KIF3A-201ENST00000378735 ROCK1Q13464 1354 aa18.13■□□□□ 0.49
KIF3A-201ENST00000378735 CHD1O14646 1710 aa18.12■□□□□ 0.49
KIF3A-201ENST00000378735 MBD5Q9P267 1494 aa18.12■□□□□ 0.49
KIF3A-201ENST00000378735 NFKBIBQ15653 356 aa18.11■□□□□ 0.49
KIF3A-201ENST00000378735 TMC1Q8TDI8 760 aa18.11■□□□□ 0.49
KIF3A-201ENST00000378735 RCAN3Q9UKA8 241 aa18.11■□□□□ 0.49
KIF3A-201ENST00000378735 MAGI3Q5TCQ9 1506 aa18.09■□□□□ 0.49
KIF3A-201ENST00000378735 KIF15Q9NS87 1388 aa18.09■□□□□ 0.49
KIF3A-201ENST00000378735 KIF14Q15058 1648 aa18.09■□□□□ 0.49
KIF3A-201ENST00000378735 FAM43AQ8N2R8 423 aa18.09■□□□□ 0.49
KIF3A-201ENST00000378735 KDM5CP41229 1560 aa18.09■□□□□ 0.49
KIF3A-201ENST00000378735 SHROOM2Q13796 1616 aa18.08■□□□□ 0.49
KIF3A-201ENST00000378735 JPH4Q96JJ6 628 aa18.08■□□□□ 0.48
KIF3A-201ENST00000378735 CHIC2Q9UKJ5 165 aa18.08■□□□□ 0.48
KIF3A-201ENST00000378735 NUP153P49790 1475 aaKnown RBP18.07■□□□□ 0.48
KIF3A-201ENST00000378735 USP47Q96K76 1375 aa18.07■□□□□ 0.48
KIF3A-201ENST00000378735 FBLN2P98095 1184 aa18.07■□□□□ 0.48
KIF3A-201ENST00000378735 FRAT1Q92837 279 aaPredicted RBP18.06■□□□□ 0.48
KIF3A-201ENST00000378735 RALBP1Q15311 655 aa18.05■□□□□ 0.48
KIF3A-201ENST00000378735 MYBBP1AQ9BQG0 1328 aaKnown RBP18.05■□□□□ 0.48
KIF3A-201ENST00000378735 INSRP06213 1382 aa18.04■□□□□ 0.48
KIF3A-201ENST00000378735 CDK13Q14004 1512 aaKnown RBP18.04■□□□□ 0.48
KIF3A-201ENST00000378735 ABCA8O94911 1581 aa18.03■□□□□ 0.48
KIF3A-201ENST00000378735 FOXD1Q16676 465 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms