RNA–Protein interactions for RNA: ENST00000378383.5

FNDC3A-201, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 2 BASIC

Gene FNDC3A, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-201ENST00000378383 SIN3AQ96ST3 1273 aa13.9□□□□□ -0.18
FNDC3A-201ENST00000378383 EHBP1L1Q8N3D4 1523 aa13.9□□□□□ -0.18
FNDC3A-201ENST00000378383 NCOA2Q15596 1464 aa13.88□□□□□ -0.19
FNDC3A-201ENST00000378383 TDRD9Q8NDG6 1382 aaKnown RBP13.88□□□□□ -0.19
FNDC3A-201ENST00000378383 ATP1B4Q9UN42 357 aaPredicted RBP13.88□□□□□ -0.19
FNDC3A-201ENST00000378383 CCDC18Q5T9S5 1454 aa13.88□□□□□ -0.19
FNDC3A-201ENST00000378383 SUPT6HQ7KZ85 1726 aaKnown RBP13.88□□□□□ -0.19
FNDC3A-201ENST00000378383 LRRIQ1Q96JM4 1722 aa13.88□□□□□ -0.19
FNDC3A-201ENST00000378383 TARBP1Q13395 1621 aaKnown RBP13.88□□□□□ -0.19
FNDC3A-201ENST00000378383 PTPN23Q9H3S7 1636 aa13.87□□□□□ -0.19
FNDC3A-201ENST00000378383 PTPRKQ15262 1439 aa13.87□□□□□ -0.19
FNDC3A-201ENST00000378383 SUPT16HQ9Y5B9 1047 aaKnown RBP13.86□□□□□ -0.19
FNDC3A-201ENST00000378383 UGGT2Q9NYU1 1516 aa13.86□□□□□ -0.19
FNDC3A-201ENST00000378383 NAIPQ13075 1403 aa13.86□□□□□ -0.19
FNDC3A-201ENST00000378383 HOXD11P31277 338 aaPredicted RBP13.85□□□□□ -0.19
FNDC3A-201ENST00000378383 TCOF1Q13428 1488 aaKnown RBP13.85□□□□□ -0.19
FNDC3A-201ENST00000378383 CCER2I3L3R5 266 aa13.85□□□□□ -0.19
FNDC3A-201ENST00000378383 AKNAQ7Z591 1439 aa13.84□□□□□ -0.19
FNDC3A-201ENST00000378383 SPDYE4A6NLX3 237 aa13.81□□□□□ -0.2
FNDC3A-201ENST00000378383 PROM2Q8N271 834 aa13.81□□□□□ -0.2
FNDC3A-201ENST00000378383 TONSLQ96HA7 1378 aa13.8□□□□□ -0.2
FNDC3A-201ENST00000378383 DDX10Q13206 875 aaKnown RBP13.8□□□□□ -0.2
FNDC3A-201ENST00000378383 HECW1Q76N89 1606 aa13.8□□□□□ -0.2
FNDC3A-201ENST00000378383 MIA2Q96PC5 1412 aa13.8□□□□□ -0.2
FNDC3A-201ENST00000378383 ECM2O94769 699 aaPredicted RBP13.78□□□□□ -0.2
FNDC3A-201ENST00000378383 IQGAP2Q13576 1575 aa13.78□□□□□ -0.2
FNDC3A-201ENST00000378383 MAGI3Q5TCQ9 1506 aa13.78□□□□□ -0.2
FNDC3A-201ENST00000378383 KDM5BQ9UGL1 1544 aa13.77□□□□□ -0.2
FNDC3A-201ENST00000378383 PBRM1Q86U86 1689 aa13.77□□□□□ -0.21
FNDC3A-201ENST00000378383 GCC2Q8IWJ2 1684 aa13.77□□□□□ -0.21
FNDC3A-201ENST00000378383 ADAMTS12P58397 1594 aa13.76□□□□□ -0.21
FNDC3A-201ENST00000378383 KCNH8Q96L42 1107 aa13.76□□□□□ -0.21
FNDC3A-201ENST00000378383 EPRSP07814 1512 aaKnown RBP13.76□□□□□ -0.21
FNDC3A-201ENST00000378383 KLHL34Q8N239 644 aa13.74□□□□□ -0.21
FNDC3A-201ENST00000378383 MSH5O43196 834 aa13.74□□□□□ -0.21
FNDC3A-201ENST00000378383 ANP32CO43423 234 aa13.73□□□□□ -0.21
FNDC3A-201ENST00000378383 WDR62O43379 1518 aa13.72□□□□□ -0.21
FNDC3A-201ENST00000378383 MRC2Q9UBG0 1479 aa13.72□□□□□ -0.21
FNDC3A-201ENST00000378383 DENND4BO75064 1496 aaPredicted RBP13.7□□□□□ -0.22
FNDC3A-201ENST00000378383 ERCC6Q03468 1493 aa13.7□□□□□ -0.22
FNDC3A-201ENST00000378383 ROCK1Q13464 1354 aa13.7□□□□□ -0.22
FNDC3A-201ENST00000378383 RGL2O15211 777 aa13.7□□□□□ -0.22
FNDC3A-201ENST00000378383 IFT140Q96RY7 1462 aa13.68□□□□□ -0.22
FNDC3A-201ENST00000378383 KIAA0586Q9BVV6 1533 aa13.68□□□□□ -0.22
FNDC3A-201ENST00000378383 NPM2Q86SE8 214 aaKnown RBP13.64□□□□□ -0.23
FNDC3A-201ENST00000378383 CDK13Q14004 1512 aaKnown RBP13.64□□□□□ -0.23
FNDC3A-201ENST00000378383 RRP7BPQ9NSQ0 103 aa13.63□□□□□ -0.23
FNDC3A-201ENST00000378383 DISP1Q96F81 1524 aa13.63□□□□□ -0.23
FNDC3A-201ENST00000378383 MPHOSPH9Q99550 1183 aa13.63□□□□□ -0.23
FNDC3A-201ENST00000378383 HIRIP3Q9BW71 556 aaPredicted RBP13.63□□□□□ -0.23
FNDC3A-201ENST00000378383 KIAA0556O60303 1618 aa13.63□□□□□ -0.23
FNDC3A-201ENST00000378383 DNMT1P26358 1616 aaKnown RBP13.62□□□□□ -0.23
FNDC3A-201ENST00000378383 DAPK1P53355 1430 aa13.62□□□□□ -0.23
FNDC3A-201ENST00000378383 KDM6BO15054 1643 aa13.62□□□□□ -0.23
FNDC3A-201ENST00000378383 ANKRD30BQ9BXX2 1392 aa13.6□□□□□ -0.23
FNDC3A-201ENST00000378383 NUP153P49790 1475 aaKnown RBP13.6□□□□□ -0.23
FNDC3A-201ENST00000378383 RPRD2Q5VT52 1461 aaKnown RBP13.6□□□□□ -0.23
FNDC3A-201ENST00000378383 ABCC5O15440 1437 aa13.59□□□□□ -0.23
FNDC3A-201ENST00000378383 EIF4G2P78344 907 aaKnown RBP eCLIP13.59□□□□□ -0.23
FNDC3A-201ENST00000378383 WASHC2AQ641Q2 1341 aa13.58□□□□□ -0.23
FNDC3A-201ENST00000378383 HSPA5P11021 654 aaKnown RBP13.58□□□□□ -0.24
FNDC3A-201ENST00000378383 CHIC2Q9UKJ5 165 aa13.58□□□□□ -0.24
FNDC3A-201ENST00000378383 CDK11AQ9UQ88 783 aaPredicted RBP13.58□□□□□ -0.24
FNDC3A-201ENST00000378383 RAPGEF6Q8TEU7 1601 aa13.58□□□□□ -0.24
FNDC3A-201ENST00000378383 TRIM52Q96A61 297 aa13.57□□□□□ -0.24
FNDC3A-201ENST00000378383 GRIN2AQ12879 1464 aa13.57□□□□□ -0.24
FNDC3A-201ENST00000378383 ZNF608Q9ULD9 1512 aaPredicted RBP13.57□□□□□ -0.24
FNDC3A-201ENST00000378383 NEFLP07196 543 aa13.56□□□□□ -0.24
FNDC3A-201ENST00000378383 NCOA1Q15788 1441 aa13.56□□□□□ -0.24
FNDC3A-201ENST00000378383 CHGAP10645 457 aaKnown RBP13.55□□□□□ -0.24
FNDC3A-201ENST00000378383 SPOCK2Q92563 424 aa13.55□□□□□ -0.24
FNDC3A-201ENST00000378383 L3MBTL2Q969R5 705 aa13.55□□□□□ -0.24
FNDC3A-201ENST00000378383 CNTLNQ9NXG0 1405 aa13.55□□□□□ -0.24
FNDC3A-201ENST00000378383 TEX14Q8IWB6 1497 aa13.55□□□□□ -0.24
FNDC3A-201ENST00000378383 TROQ12816 1431 aaPredicted RBP13.54□□□□□ -0.24
FNDC3A-201ENST00000378383 MAGI1Q96QZ7 1491 aaPredicted RBP13.54□□□□□ -0.24
FNDC3A-201ENST00000378383 SPATA31E1Q6ZUB1 1445 aa13.53□□□□□ -0.24
FNDC3A-201ENST00000378383 ADCY10Q96PN6 1610 aa13.53□□□□□ -0.24
FNDC3A-201ENST00000378383 ADGRL2O95490 1459 aa13.52□□□□□ -0.24
FNDC3A-201ENST00000378383 DMRT2Q9Y5R5 561 aa13.52□□□□□ -0.24
FNDC3A-201ENST00000378383 ITSN2Q9NZM3 1697 aa13.51□□□□□ -0.25
FNDC3A-201ENST00000378383 CCDC7Q96M83 1385 aa13.51□□□□□ -0.25
FNDC3A-201ENST00000378383 EIF4G3O43432 1585 aaKnown RBP13.51□□□□□ -0.25
FNDC3A-201ENST00000378383 ERICH6BQ5W0A0 696 aa13.51□□□□□ -0.25
FNDC3A-201ENST00000378383 POLR1AO95602 1720 aaPredicted RBP13.5□□□□□ -0.25
FNDC3A-201ENST00000378383 PZPP20742 1482 aa13.49□□□□□ -0.25
FNDC3A-201ENST00000378383 MKRN4PQ13434 485 aaPredicted RBP13.49□□□□□ -0.25
FNDC3A-201ENST00000378383 ADGBQ8N7X0 1667 aa13.48□□□□□ -0.25
FNDC3A-201ENST00000378383 GPATCH8Q9UKJ3 1502 aaKnown RBP13.48□□□□□ -0.25
FNDC3A-201ENST00000378383 SYNJ2O15056 1496 aa13.48□□□□□ -0.25
FNDC3A-201ENST00000378383 CAMSAP2Q08AD1 1489 aa13.48□□□□□ -0.25
FNDC3A-201ENST00000378383 ZNF219Q9P2Y4 722 aaPredicted RBP13.47□□□□□ -0.25
FNDC3A-201ENST00000378383 PRKRIP1Q9H875 184 aaPredicted RBP13.47□□□□□ -0.25
FNDC3A-201ENST00000378383 MBD5Q9P267 1494 aa13.46□□□□□ -0.25
FNDC3A-201ENST00000378383 NUP160Q12769 1436 aa13.46□□□□□ -0.25
FNDC3A-201ENST00000378383 ZNF644Q9H582 1327 aaPredicted RBP13.46□□□□□ -0.25
FNDC3A-201ENST00000378383 NBPF8Q3BBV2 869 aa13.46□□□□□ -0.25
FNDC3A-201ENST00000378383 CROCC2H7BZ55 1655 aa13.45□□□□□ -0.26
FNDC3A-201ENST00000378383 PRG4Q92954 1404 aaPredicted RBP13.45□□□□□ -0.26
FNDC3A-201ENST00000378383 HNRNPUQ00839 825 aaKnown RBP eCLIP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms