RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 CFDP1Q9UEE9 299 aaPredicted RBP27.51■■□□□ 1.99
PCDHA4-201ENST00000378125 ABCC5O15440 1437 aa27.51■■□□□ 1.99
PCDHA4-201ENST00000378125 KIF14Q15058 1648 aa27.49■■□□□ 1.99
PCDHA4-201ENST00000378125 DENND4BO75064 1496 aaPredicted RBP27.48■■□□□ 1.99
PCDHA4-201ENST00000378125 MPHOSPH9Q99550 1183 aa27.47■■□□□ 1.99
PCDHA4-201ENST00000378125 AKNAQ7Z591 1439 aa27.47■■□□□ 1.99
PCDHA4-201ENST00000378125 DNMT1P26358 1616 aaKnown RBP27.45■■□□□ 1.99
PCDHA4-201ENST00000378125 PLEKHD1A6NEE1 506 aa27.42■■□□□ 1.98
PCDHA4-201ENST00000378125 GPATCH8Q9UKJ3 1502 aaKnown RBP27.42■■□□□ 1.98
PCDHA4-201ENST00000378125 CAMSAP2Q08AD1 1489 aa27.42■■□□□ 1.98
PCDHA4-201ENST00000378125 ABCA8O94911 1581 aa27.4■■□□□ 1.98
PCDHA4-201ENST00000378125 ATP10BO94823 1461 aa27.39■■□□□ 1.98
PCDHA4-201ENST00000378125 ROCK1Q13464 1354 aa27.39■■□□□ 1.97
PCDHA4-201ENST00000378125 KCNH8Q96L42 1107 aa27.39■■□□□ 1.97
PCDHA4-201ENST00000378125 CHD1O14646 1710 aa27.36■■□□□ 1.97
PCDHA4-201ENST00000378125 ITSN2Q9NZM3 1697 aa27.35■■□□□ 1.97
PCDHA4-201ENST00000378125 PTPRGP23470 1445 aa27.34■■□□□ 1.97
PCDHA4-201ENST00000378125 ADCY10Q96PN6 1610 aa27.34■■□□□ 1.97
PCDHA4-201ENST00000378125 KDM5BQ9UGL1 1544 aa27.34■■□□□ 1.97
PCDHA4-201ENST00000378125 SLC4A1APQ9BWU0 796 aaKnown RBP27.32■■□□□ 1.96
PCDHA4-201ENST00000378125 NCOA1Q15788 1441 aa27.26■■□□□ 1.95
PCDHA4-201ENST00000378125 L3MBTL2Q969R5 705 aa27.26■■□□□ 1.95
PCDHA4-201ENST00000378125 CDC42BPAQ5VT25 1732 aa27.25■■□□□ 1.95
PCDHA4-201ENST00000378125 ABCC10Q5T3U5 1492 aa27.24■■□□□ 1.95
PCDHA4-201ENST00000378125 ANKRD30BQ9BXX2 1392 aa27.21■■□□□ 1.95
PCDHA4-201ENST00000378125 HNRNPMP52272 730 aaKnown RBP eCLIP27.19■■□□□ 1.94
PCDHA4-201ENST00000378125 ADGBQ8N7X0 1667 aa27.19■■□□□ 1.94
PCDHA4-201ENST00000378125 ERCC6L2Q5T890 1561 aa27.18■■□□□ 1.94
PCDHA4-201ENST00000378125 CROCC2H7BZ55 1655 aa27.18■■□□□ 1.94
PCDHA4-201ENST00000378125 ANKRD30AQ9BXX3 1397 aa27.17■■□□□ 1.94
PCDHA4-201ENST00000378125 HSPA5P11021 654 aaKnown RBP27.17■■□□□ 1.94
PCDHA4-201ENST00000378125 PZPP20742 1482 aa27.15■■□□□ 1.94
PCDHA4-201ENST00000378125 ADGRL2O95490 1459 aa27.13■■□□□ 1.93
PCDHA4-201ENST00000378125 RPRD2Q5VT52 1461 aaKnown RBP27.12■■□□□ 1.93
PCDHA4-201ENST00000378125 ANP32CO43423 234 aa27.12■■□□□ 1.93
PCDHA4-201ENST00000378125 TSPY4P0CV99 314 aa27.12■■□□□ 1.93
PCDHA4-201ENST00000378125 TSPY10P0CW01 314 aa27.12■■□□□ 1.93
PCDHA4-201ENST00000378125 C9orf84Q5VXU9 1444 aa27.11■■□□□ 1.93
PCDHA4-201ENST00000378125 ANKRD50Q9ULJ7 1429 aa27.11■■□□□ 1.93
PCDHA4-201ENST00000378125 NBPF8Q3BBV2 869 aa27.1■■□□□ 1.93
PCDHA4-201ENST00000378125 PKD2Q13563 968 aa27.1■■□□□ 1.93
PCDHA4-201ENST00000378125 SHROOM2Q13796 1616 aa27.09■■□□□ 1.93
PCDHA4-201ENST00000378125 EIF4G2P78344 907 aaKnown RBP eCLIP27.07■■□□□ 1.92
PCDHA4-201ENST00000378125 TEX14Q8IWB6 1497 aa27.04■■□□□ 1.92
PCDHA4-201ENST00000378125 WASHC2AQ641Q2 1341 aa27.03■■□□□ 1.92
PCDHA4-201ENST00000378125 NUP155O75694 1391 aa27.03■■□□□ 1.92
PCDHA4-201ENST00000378125 CDC42BPBQ9Y5S2 1711 aa27.02■■□□□ 1.92
PCDHA4-201ENST00000378125 KIAA1107Q9UPP5 1409 aa27.01■■□□□ 1.91
PCDHA4-201ENST00000378125 SAMD9LQ8IVG5 1584 aa27■■□□□ 1.91
PCDHA4-201ENST00000378125 ZNF326Q5BKZ1 582 aaKnown RBP27■■□□□ 1.91
PCDHA4-201ENST00000378125 KIF15Q9NS87 1388 aa27■■□□□ 1.91
PCDHA4-201ENST00000378125 MBD5Q9P267 1494 aa27■■□□□ 1.91
PCDHA4-201ENST00000378125 SHANK2Q9UPX8 1470 aa27■■□□□ 1.91
PCDHA4-201ENST00000378125 TTC37Q6PGP7 1564 aa26.98■■□□□ 1.91
PCDHA4-201ENST00000378125 PREX2Q70Z35 1606 aa26.97■■□□□ 1.91
PCDHA4-201ENST00000378125 C11orf95C9JLR9 678 aaPredicted RBP26.96■■□□□ 1.91
PCDHA4-201ENST00000378125 ABCC2Q92887 1545 aa26.96■■□□□ 1.91
PCDHA4-201ENST00000378125 ARHGAP5Q13017 1502 aa26.95■■□□□ 1.9
PCDHA4-201ENST00000378125 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.95■■□□□ 1.9
PCDHA4-201ENST00000378125 CCER2I3L3R5 266 aa26.94■■□□□ 1.9
PCDHA4-201ENST00000378125 CCDC141Q6ZP82 1450 aa26.93■■□□□ 1.9
PCDHA4-201ENST00000378125 ARHGEF5Q12774 1597 aa26.92■■□□□ 1.9
PCDHA4-201ENST00000378125 SYCP2Q9BX26 1530 aa26.92■■□□□ 1.9
PCDHA4-201ENST00000378125 CLASP1Q7Z460 1538 aa26.89■■□□□ 1.89
PCDHA4-201ENST00000378125 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.84■■□□□ 1.89
PCDHA4-201ENST00000378125 RSPH4AQ5TD94 716 aa26.83■■□□□ 1.89
PCDHA4-201ENST00000378125 CCDC7Q96M83 1385 aa26.83■■□□□ 1.89
PCDHA4-201ENST00000378125 ZCCHC11Q5TAX3 1644 aaKnown RBP26.83■■□□□ 1.89
PCDHA4-201ENST00000378125 KDM2AQ9Y2K7 1162 aa26.82■■□□□ 1.88
PCDHA4-201ENST00000378125 MYO5CQ9NQX4 1742 aa26.81■■□□□ 1.88
PCDHA4-201ENST00000378125 SUPT16HQ9Y5B9 1047 aaKnown RBP26.8■■□□□ 1.88
PCDHA4-201ENST00000378125 SPATA31E1Q6ZUB1 1445 aa26.79■■□□□ 1.88
PCDHA4-201ENST00000378125 KDM5DQ9BY66 1539 aa26.78■■□□□ 1.88
PCDHA4-201ENST00000378125 CNTLNQ9NXG0 1405 aa26.78■■□□□ 1.88
PCDHA4-201ENST00000378125 KIF7Q2M1P5 1343 aa26.77■■□□□ 1.88
PCDHA4-201ENST00000378125 POLR3GLQ9BT43 218 aa26.77■■□□□ 1.88
PCDHA4-201ENST00000378125 ARHGEF12Q9NZN5 1544 aa26.77■■□□□ 1.88
PCDHA4-201ENST00000378125 FAM135AQ9P2D6 1515 aa26.75■■□□□ 1.87
PCDHA4-201ENST00000378125 DCAF11Q8TEB1 546 aa26.73■■□□□ 1.87
PCDHA4-201ENST00000378125 EFCAB2Q5VUJ9 269 aa26.72■■□□□ 1.87
PCDHA4-201ENST00000378125 USP47Q96K76 1375 aa26.72■■□□□ 1.87
PCDHA4-201ENST00000378125 PLCH2O75038 1416 aa26.72■■□□□ 1.87
PCDHA4-201ENST00000378125 CNGB1Q14028 1251 aaPredicted RBP26.71■■□□□ 1.87
PCDHA4-201ENST00000378125 UHRF1BP1LA0JNW5 1464 aa26.71■■□□□ 1.87
PCDHA4-201ENST00000378125 PLEKHH2Q8IVE3 1493 aa26.7■■□□□ 1.87
PCDHA4-201ENST00000378125 CCDC184Q52MB2 194 aa26.7■■□□□ 1.86
PCDHA4-201ENST00000378125 MAST1Q9Y2H9 1570 aa26.68■■□□□ 1.86
PCDHA4-201ENST00000378125 RGL3Q3MIN7 710 aa26.67■■□□□ 1.86
PCDHA4-201ENST00000378125 CARD11Q9BXL7 1154 aa26.66■■□□□ 1.86
PCDHA4-201ENST00000378125 TRAPPC8Q9Y2L5 1435 aa26.65■■□□□ 1.86
PCDHA4-201ENST00000378125 PRKRIP1Q9H875 184 aaPredicted RBP26.64■■□□□ 1.86
PCDHA4-201ENST00000378125 HNRNPUQ00839 825 aaKnown RBP eCLIP26.64■■□□□ 1.85
PCDHA4-201ENST00000378125 AFAP1Q8N556 730 aa26.63■■□□□ 1.85
PCDHA4-201ENST00000378125 BCORL1Q5H9F3 1711 aa26.62■■□□□ 1.85
PCDHA4-201ENST00000378125 UHRF1BP1Q6BDS2 1440 aa26.61■■□□□ 1.85
PCDHA4-201ENST00000378125 CCDC144AA2RUR9 1427 aa26.61■■□□□ 1.85
PCDHA4-201ENST00000378125 PLXNC1O60486 1568 aa26.6■■□□□ 1.85
PCDHA4-201ENST00000378125 KDM5CP41229 1560 aa26.6■■□□□ 1.85
PCDHA4-201ENST00000378125 PELP1Q8IZL8 1130 aaKnown RBP26.6■■□□□ 1.85
PCDHA4-201ENST00000378125 BCANQ96GW7 911 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms