RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 NPM1P06748 294 aaKnown RBP eCLIP11.35□□□□□ -0.59
CKAP2-203ENST00000378037 CFAP43Q8NDM7 1665 aa11.34□□□□□ -0.59
CKAP2-203ENST00000378037 NUTM2DQ5VT03 806 aaPredicted RBP11.34□□□□□ -0.59
CKAP2-203ENST00000378037 ARHGAP35Q9NRY4 1499 aa11.33□□□□□ -0.6
CKAP2-203ENST00000378037 HNRNPUQ00839 825 aaKnown RBP eCLIP11.33□□□□□ -0.6
CKAP2-203ENST00000378037 ARAP3Q8WWN8 1544 aa11.31□□□□□ -0.6
CKAP2-203ENST00000378037 DIP2BQ9P265 1576 aa11.3□□□□□ -0.6
CKAP2-203ENST00000378037 CYB5RLQ6IPT4 315 aa11.3□□□□□ -0.6
CKAP2-203ENST00000378037 ABCC2Q92887 1545 aa11.3□□□□□ -0.6
CKAP2-203ENST00000378037 ERCC6L2Q5T890 1561 aa11.28□□□□□ -0.6
CKAP2-203ENST00000378037 PKD2Q13563 968 aa11.28□□□□□ -0.6
CKAP2-203ENST00000378037 DHX57Q6P158 1386 aaKnown RBP11.28□□□□□ -0.6
CKAP2-203ENST00000378037 SAFB2Q14151 953 aaKnown RBP eCLIP11.28□□□□□ -0.6
CKAP2-203ENST00000378037 GGT6Q6P531 493 aa11.27□□□□□ -0.6
CKAP2-203ENST00000378037 DCAF11Q8TEB1 546 aa11.27□□□□□ -0.6
CKAP2-203ENST00000378037 ZCCHC11Q5TAX3 1644 aaKnown RBP11.27□□□□□ -0.61
CKAP2-203ENST00000378037 FKBP8Q14318 412 aa11.26□□□□□ -0.61
CKAP2-203ENST00000378037 LRRIQ1Q96JM4 1722 aa11.26□□□□□ -0.61
CKAP2-203ENST00000378037 ABCA9Q8IUA7 1624 aa11.26□□□□□ -0.61
CKAP2-203ENST00000378037 MPHOSPH9Q99550 1183 aa11.25□□□□□ -0.61
CKAP2-203ENST00000378037 SETD5Q9C0A6 1442 aa11.25□□□□□ -0.61
CKAP2-203ENST00000378037 L3MBTL2Q969R5 705 aa11.24□□□□□ -0.61
CKAP2-203ENST00000378037 OSCARQ8IYS5 282 aa11.24□□□□□ -0.61
CKAP2-203ENST00000378037 TNNT2P45379 298 aaPredicted RBP11.23□□□□□ -0.61
CKAP2-203ENST00000378037 CFAP74Q9C0B2 1584 aa11.23□□□□□ -0.61
CKAP2-203ENST00000378037 MRS2Q9HD23 443 aa11.22□□□□□ -0.61
CKAP2-203ENST00000378037 STAG3Q9UJ98 1225 aa11.22□□□□□ -0.61
CKAP2-203ENST00000378037 BCORL1Q5H9F3 1711 aa11.22□□□□□ -0.61
CKAP2-203ENST00000378037 RAPGEF6Q8TEU7 1601 aa11.21□□□□□ -0.61
CKAP2-203ENST00000378037 EIF4G2P78344 907 aaKnown RBP eCLIP11.21□□□□□ -0.61
CKAP2-203ENST00000378037 CARD11Q9BXL7 1154 aa11.2□□□□□ -0.62
CKAP2-203ENST00000378037 FMN1Q68DA7 1419 aa11.2□□□□□ -0.62
CKAP2-203ENST00000378037 HSPA5P11021 654 aaKnown RBP11.2□□□□□ -0.62
CKAP2-203ENST00000378037 AFAP1Q8N556 730 aa11.18□□□□□ -0.62
CKAP2-203ENST00000378037 MAP3K1Q13233 1512 aa11.18□□□□□ -0.62
CKAP2-203ENST00000378037 NUP155O75694 1391 aa11.18□□□□□ -0.62
CKAP2-203ENST00000378037 TRHP20396 242 aaPredicted RBP11.17□□□□□ -0.62
CKAP2-203ENST00000378037 ARID4BQ4LE39 1312 aaPredicted RBP11.17□□□□□ -0.62
CKAP2-203ENST00000378037 CC2D1BQ5T0F9 858 aaKnown RBP11.17□□□□□ -0.62
CKAP2-203ENST00000378037 REREQ9P2R6 1566 aa11.17□□□□□ -0.62
CKAP2-203ENST00000378037 CDK13Q14004 1512 aaKnown RBP11.17□□□□□ -0.62
CKAP2-203ENST00000378037 PRG4Q92954 1404 aaPredicted RBP11.17□□□□□ -0.62
CKAP2-203ENST00000378037 TMC1Q8TDI8 760 aa11.16□□□□□ -0.62
CKAP2-203ENST00000378037 ABCC10Q5T3U5 1492 aa11.16□□□□□ -0.62
CKAP2-203ENST00000378037 KIF3BO15066 747 aa11.15□□□□□ -0.62
CKAP2-203ENST00000378037 PPP1R15AO75807 674 aaPredicted RBP11.15□□□□□ -0.62
CKAP2-203ENST00000378037 PTPRGP23470 1445 aa11.15□□□□□ -0.63
CKAP2-203ENST00000378037 LRRC9Q6ZRR7 1453 aa11.14□□□□□ -0.63
CKAP2-203ENST00000378037 MAGI3Q5TCQ9 1506 aa11.14□□□□□ -0.63
CKAP2-203ENST00000378037 SLC24A1O60721 1099 aa11.14□□□□□ -0.63
CKAP2-203ENST00000378037 STK26Q9P289 416 aa11.13□□□□□ -0.63
CKAP2-203ENST00000378037 ZMYM4Q5VZL5 1548 aa11.13□□□□□ -0.63
CKAP2-203ENST00000378037 HECW1Q76N89 1606 aa11.12□□□□□ -0.63
CKAP2-203ENST00000378037 ESF1Q9H501 851 aaKnown RBP11.12□□□□□ -0.63
CKAP2-203ENST00000378037 CARMIL2Q6F5E8 1435 aa11.12□□□□□ -0.63
CKAP2-203ENST00000378037 NEUROD2Q15784 382 aa11.11□□□□□ -0.63
CKAP2-203ENST00000378037 PLB1Q6P1J6 1458 aa11.11□□□□□ -0.63
CKAP2-203ENST00000378037 SOX12O15370 315 aa11.11□□□□□ -0.63
CKAP2-203ENST00000378037 NUTM2FA1L443 756 aa11.1□□□□□ -0.63
CKAP2-203ENST00000378037 SUPT16HQ9Y5B9 1047 aaKnown RBP11.1□□□□□ -0.63
CKAP2-203ENST00000378037 FGD6Q6ZV73 1430 aa11.1□□□□□ -0.63
CKAP2-203ENST00000378037 NCOA2Q15596 1464 aa11.09□□□□□ -0.63
CKAP2-203ENST00000378037 PPM1GO15355 546 aaPredicted RBP11.09□□□□□ -0.63
CKAP2-203ENST00000378037 RICTORQ6R327 1708 aa11.08□□□□□ -0.64
CKAP2-203ENST00000378037 MYT1Q01538 1121 aa11.08□□□□□ -0.64
CKAP2-203ENST00000378037 FAM135AQ9P2D6 1515 aa11.07□□□□□ -0.64
CKAP2-203ENST00000378037 ST20-MTHFSA0A0A6YYL1 179 aa11.06□□□□□ -0.64
CKAP2-203ENST00000378037 CCDC18Q5T9S5 1454 aa11.06□□□□□ -0.64
CKAP2-203ENST00000378037 AEBP2Q6ZN18 517 aaPredicted RBP11.05□□□□□ -0.64
CKAP2-203ENST00000378037 UACAQ9BZF9 1416 aa11.05□□□□□ -0.64
CKAP2-203ENST00000378037 FRMPD1Q5SYB0 1578 aa11.05□□□□□ -0.64
CKAP2-203ENST00000378037 PREX2Q70Z35 1606 aa11.05□□□□□ -0.64
CKAP2-203ENST00000378037 PCF11O94913 1555 aaKnown RBP11.04□□□□□ -0.64
CKAP2-203ENST00000378037 RAPGEF3O95398 923 aa11.04□□□□□ -0.64
CKAP2-203ENST00000378037 NBPF8Q3BBV2 869 aa11.04□□□□□ -0.64
CKAP2-203ENST00000378037 ZBTB7CA1YPR0 619 aa11.04□□□□□ -0.64
CKAP2-203ENST00000378037 EFCAB2Q5VUJ9 269 aa11.04□□□□□ -0.64
CKAP2-203ENST00000378037 ERICH6Q7L0X2 663 aa11.03□□□□□ -0.64
CKAP2-203ENST00000378037 EPRSP07814 1512 aaKnown RBP11.03□□□□□ -0.64
CKAP2-203ENST00000378037 MYO5CQ9NQX4 1742 aa11.03□□□□□ -0.64
CKAP2-203ENST00000378037 CCDC184Q52MB2 194 aa11.03□□□□□ -0.64
CKAP2-203ENST00000378037 FYCO1Q9BQS8 1478 aa11.02□□□□□ -0.65
CKAP2-203ENST00000378037 MYOM3Q5VTT5 1437 aa11.02□□□□□ -0.65
CKAP2-203ENST00000378037 CASKIN1Q8WXD9 1431 aa11.02□□□□□ -0.65
CKAP2-203ENST00000378037 SPAG9O60271 1321 aaKnown RBP11.02□□□□□ -0.65
CKAP2-203ENST00000378037 PTPRKQ15262 1439 aa11.01□□□□□ -0.65
CKAP2-203ENST00000378037 ITSN2Q9NZM3 1697 aa11.01□□□□□ -0.65
CKAP2-203ENST00000378037 NBPF1Q3BBV0 1214 aa11.01□□□□□ -0.65
CKAP2-203ENST00000378037 WDR7Q9Y4E6 1490 aa11.01□□□□□ -0.65
CKAP2-203ENST00000378037 KDM5CP41229 1560 aa11.01□□□□□ -0.65
CKAP2-203ENST00000378037 NPM2Q86SE8 214 aaKnown RBP11□□□□□ -0.65
CKAP2-203ENST00000378037 TRAK1Q9UPV9 953 aa11□□□□□ -0.65
CKAP2-203ENST00000378037 C11orf95C9JLR9 678 aaPredicted RBP10.99□□□□□ -0.65
CKAP2-203ENST00000378037 NUP153P49790 1475 aaKnown RBP10.99□□□□□ -0.65
CKAP2-203ENST00000378037 NEO1Q92859 1461 aa10.98□□□□□ -0.65
CKAP2-203ENST00000378037 ANKRD30AQ9BXX3 1397 aa10.98□□□□□ -0.65
CKAP2-203ENST00000378037 CDC42BPAQ5VT25 1732 aa10.98□□□□□ -0.65
CKAP2-203ENST00000378037 TMEM132EQ6IEE7 984 aa10.98□□□□□ -0.65
CKAP2-203ENST00000378037 TIAM1Q13009 1591 aa10.98□□□□□ -0.65
CKAP2-203ENST00000378037 C14orf37Q86TY3 774 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms