RNA–Protein interactions for RNA: ENST00000377707.3

SHB-201, Transcript of SH2 domain containing adaptor protein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHB, Length 2,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHB-201ENST00000377707 EPRSP07814 1512 aaKnown RBP28.2■■■□□ 2.1
SHB-201ENST00000377707 HSPA5P11021 654 aaKnown RBP28.2■■■□□ 2.1
SHB-201ENST00000377707 KDM6BO15054 1643 aa28.19■■■□□ 2.1
SHB-201ENST00000377707 IRX6P78412 446 aaPredicted RBP28.17■■■□□ 2.1
SHB-201ENST00000377707 ERCC6L2Q5T890 1561 aa28.17■■■□□ 2.1
SHB-201ENST00000377707 NUP153P49790 1475 aaKnown RBP28.16■■■□□ 2.1
SHB-201ENST00000377707 EHBP1L1Q8N3D4 1523 aa28.16■■■□□ 2.1
SHB-201ENST00000377707 KDM5BQ9UGL1 1544 aa28.15■■■□□ 2.1
SHB-201ENST00000377707 DENND4BO75064 1496 aaPredicted RBP28.15■■■□□ 2.1
SHB-201ENST00000377707 WASHC2AQ641Q2 1341 aa28.15■■■□□ 2.1
SHB-201ENST00000377707 HECW1Q76N89 1606 aa28.14■■■□□ 2.1
SHB-201ENST00000377707 NEFLP07196 543 aa28.14■■■□□ 2.1
SHB-201ENST00000377707 ZNF644Q9H582 1327 aaPredicted RBP28.14■■■□□ 2.1
SHB-201ENST00000377707 HNRNPUQ00839 825 aaKnown RBP eCLIP28.14■■■□□ 2.097e-8■□□□□ 8.3
SHB-201ENST00000377707 PTPRGP23470 1445 aa28.14■■■□□ 2.09
SHB-201ENST00000377707 MPHOSPH9Q99550 1183 aa28.12■■■□□ 2.09
SHB-201ENST00000377707 CCDC184Q52MB2 194 aa28.11■■■□□ 2.09
SHB-201ENST00000377707 CNGB1Q14028 1251 aaPredicted RBP28.11■■■□□ 2.09
SHB-201ENST00000377707 L3MBTL2Q969R5 705 aa28.11■■■□□ 2.09
SHB-201ENST00000377707 RAPGEF6Q8TEU7 1601 aa28.1■■■□□ 2.09
SHB-201ENST00000377707 C11orf95C9JLR9 678 aaPredicted RBP28.09■■■□□ 2.09
SHB-201ENST00000377707 ARHGEF11O15085 1522 aa28.04■■■□□ 2.08
SHB-201ENST00000377707 CLASP1Q7Z460 1538 aa28.03■■■□□ 2.08
SHB-201ENST00000377707 OSCARQ8IYS5 282 aa28.02■■■□□ 2.08
SHB-201ENST00000377707 EIF4G2P78344 907 aaKnown RBP eCLIP28■■■□□ 2.07
SHB-201ENST00000377707 SHROOM2Q13796 1616 aa28■■■□□ 2.07
SHB-201ENST00000377707 NBPF8Q3BBV2 869 aa27.99■■■□□ 2.07
SHB-201ENST00000377707 CDK11AQ9UQ88 783 aaPredicted RBP27.97■■■□□ 2.07
SHB-201ENST00000377707 TCOF1Q13428 1488 aaKnown RBP27.95■■■□□ 2.07
SHB-201ENST00000377707 ABCA8O94911 1581 aa27.95■■■□□ 2.06
SHB-201ENST00000377707 FAM9BQ8IZU0 186 aa27.94■■■□□ 2.06
SHB-201ENST00000377707 ATP10BO94823 1461 aa27.94■■■□□ 2.06
SHB-201ENST00000377707 ANO8Q9HCE9 1232 aaPredicted RBP27.94■■■□□ 2.06
SHB-201ENST00000377707 ZNF777Q9ULD5 760 aaPredicted RBP27.93■■■□□ 2.06
SHB-201ENST00000377707 SENP3-EIF4A1A0A087X0R7 540 aa27.92■■■□□ 2.06
SHB-201ENST00000377707 SLC4A1APQ9BWU0 796 aaKnown RBP27.92■■■□□ 2.06
SHB-201ENST00000377707 PLEKHD1A6NEE1 506 aa27.9■■■□□ 2.06
SHB-201ENST00000377707 RBM19Q9Y4C8 960 aaKnown RBP27.9■■■□□ 2.06
SHB-201ENST00000377707 ZNF326Q5BKZ1 582 aaKnown RBP27.89■■■□□ 2.06
SHB-201ENST00000377707 POLR3GLQ9BT43 218 aa27.89■■■□□ 2.06
SHB-201ENST00000377707 GCC2Q8IWJ2 1684 aa27.89■■■□□ 2.05
SHB-201ENST00000377707 EIF5BO60841 1220 aaKnown RBP27.85■■■□□ 2.05
SHB-201ENST00000377707 DAPK1P53355 1430 aa27.84■■■□□ 2.05
SHB-201ENST00000377707 TROQ12816 1431 aaPredicted RBP27.84■■■□□ 2.05
SHB-201ENST00000377707 ABCC5O15440 1437 aa27.84■■■□□ 2.05
SHB-201ENST00000377707 MIA2Q96PC5 1412 aa27.83■■■□□ 2.05
SHB-201ENST00000377707 ANKRD30BQ9BXX2 1392 aa27.81■■■□□ 2.04
SHB-201ENST00000377707 MRS2Q9HD23 443 aa27.8■■■□□ 2.04
SHB-201ENST00000377707 UBE2Q2Q8WVN8 375 aa27.8■■■□□ 2.04
SHB-201ENST00000377707 PRKRIP1Q9H875 184 aaPredicted RBP27.8■■■□□ 2.04
SHB-201ENST00000377707 CCDC7Q96M83 1385 aa27.79■■■□□ 2.04
SHB-201ENST00000377707 CNTLNQ9NXG0 1405 aa27.78■■■□□ 2.04
SHB-201ENST00000377707 DAXXQ9UER7 740 aaPredicted RBP27.77■■■□□ 2.04
SHB-201ENST00000377707 KIF14Q15058 1648 aa27.77■■■□□ 2.04
SHB-201ENST00000377707 CFDP1Q9UEE9 299 aaPredicted RBP27.76■■■□□ 2.03
SHB-201ENST00000377707 KIF7Q2M1P5 1343 aa27.75■■■□□ 2.03
SHB-201ENST00000377707 AKNAQ7Z591 1439 aa27.74■■■□□ 2.03
SHB-201ENST00000377707 NCOA1Q15788 1441 aa27.71■■■□□ 2.03
SHB-201ENST00000377707 ABCC2Q92887 1545 aa27.71■■■□□ 2.03
SHB-201ENST00000377707 RPRD2Q5VT52 1461 aaKnown RBP27.71■■■□□ 2.03
SHB-201ENST00000377707 TEX14Q8IWB6 1497 aa27.68■■■□□ 2.02
SHB-201ENST00000377707 GPATCH8Q9UKJ3 1502 aaKnown RBP27.66■■■□□ 2.02
SHB-201ENST00000377707 PKD2Q13563 968 aa27.65■■■□□ 2.02
SHB-201ENST00000377707 DNMT1P26358 1616 aaKnown RBP27.64■■■□□ 2.02
SHB-201ENST00000377707 ROCK1Q13464 1354 aa27.64■■■□□ 2.01
SHB-201ENST00000377707 B4GALNT3Q6L9W6 998 aa27.61■■■□□ 2.01
SHB-201ENST00000377707 PZPP20742 1482 aa27.59■■■□□ 2.01
SHB-201ENST00000377707 CAMSAP2Q08AD1 1489 aa27.59■■■□□ 2.01
SHB-201ENST00000377707 MSH5O43196 834 aa27.59■■■□□ 2.01
SHB-201ENST00000377707 SPATA31E1Q6ZUB1 1445 aa27.58■■■□□ 2.01
SHB-201ENST00000377707 ABCC10Q5T3U5 1492 aa27.58■■■□□ 2.01
SHB-201ENST00000377707 KDM2AQ9Y2K7 1162 aa27.58■■■□□ 2.01
SHB-201ENST00000377707 ADCY10Q96PN6 1610 aa27.55■■■□□ 2
SHB-201ENST00000377707 UHRF1BP1LA0JNW5 1464 aa27.54■■■□□ 2
SHB-201ENST00000377707 ZCCHC11Q5TAX3 1644 aaKnown RBP27.53■■■□□ 2
SHB-201ENST00000377707 CYB5RLQ6IPT4 315 aa27.53■■■□□ 2
SHB-201ENST00000377707 HNRNPMP52272 730 aaKnown RBP eCLIP27.52■■■□□ 21e-6■■■□□ 19
SHB-201ENST00000377707 USP47Q96K76 1375 aa27.5■■□□□ 1.99
SHB-201ENST00000377707 ZBED9Q6R2W3 1325 aa27.47■■□□□ 1.99
SHB-201ENST00000377707 NUP155O75694 1391 aa27.45■■□□□ 1.98
SHB-201ENST00000377707 PPP4R2Q9NY27 417 aa27.45■■□□□ 1.98
SHB-201ENST00000377707 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.45■■□□□ 1.98
SHB-201ENST00000377707 CDC42BPAQ5VT25 1732 aa27.45■■□□□ 1.98
SHB-201ENST00000377707 BCORL1Q5H9F3 1711 aa27.44■■□□□ 1.98
SHB-201ENST00000377707 TTC37Q6PGP7 1564 aa27.44■■□□□ 1.98
SHB-201ENST00000377707 KIAA1107Q9UPP5 1409 aa27.44■■□□□ 1.98
SHB-201ENST00000377707 NPM1P06748 294 aaKnown RBP eCLIP27.44■■□□□ 1.98
SHB-201ENST00000377707 DHX29Q7Z478 1369 aaKnown RBP27.42■■□□□ 1.98
SHB-201ENST00000377707 ANKRD50Q9ULJ7 1429 aa27.42■■□□□ 1.98
SHB-201ENST00000377707 CARD11Q9BXL7 1154 aa27.41■■□□□ 1.98
SHB-201ENST00000377707 ITSN2Q9NZM3 1697 aa27.41■■□□□ 1.98
SHB-201ENST00000377707 ANKRD30AQ9BXX3 1397 aa27.4■■□□□ 1.98
SHB-201ENST00000377707 SALL2Q9Y467 1007 aaPredicted RBP27.39■■□□□ 1.97
SHB-201ENST00000377707 DCAF11Q8TEB1 546 aa27.38■■□□□ 1.97
SHB-201ENST00000377707 ST20-MTHFSA0A0A6YYL1 179 aa27.37■■□□□ 1.97
SHB-201ENST00000377707 ASXL2Q76L83 1435 aa27.37■■□□□ 1.97
SHB-201ENST00000377707 ARHGAP5Q13017 1502 aa27.36■■□□□ 1.97
SHB-201ENST00000377707 MBD5Q9P267 1494 aa27.34■■□□□ 1.97
SHB-201ENST00000377707 WDR7Q9Y4E6 1490 aa27.34■■□□□ 1.97
SHB-201ENST00000377707 TSPY4P0CV99 314 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms