RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 SAFB2Q14151 953 aaKnown RBP eCLIP14.12□□□□□ -0.15
HIF3A-205ENST00000377670 MAPK8IP3Q9UPT6 1336 aa14.12□□□□□ -0.15
HIF3A-205ENST00000377670 CC2D1BQ5T0F9 858 aaKnown RBP14.12□□□□□ -0.15
HIF3A-205ENST00000377670 FMN1Q68DA7 1419 aa14.11□□□□□ -0.15
HIF3A-205ENST00000377670 STK26Q9P289 416 aa14.11□□□□□ -0.15
HIF3A-205ENST00000377670 NESP48681 1621 aa14.11□□□□□ -0.15
HIF3A-205ENST00000377670 TULP1O00294 542 aaPredicted RBP14.1□□□□□ -0.15
HIF3A-205ENST00000377670 LAS1LQ9Y4W2 734 aaKnown RBP14.1□□□□□ -0.15
HIF3A-205ENST00000377670 IGF1RP08069 1367 aa14.1□□□□□ -0.15
HIF3A-205ENST00000377670 NEUROD2Q15784 382 aa14.09□□□□□ -0.15
HIF3A-205ENST00000377670 MPHOSPH9Q99550 1183 aa14.09□□□□□ -0.15
HIF3A-205ENST00000377670 DDRGK1Q96HY6 314 aa14.07□□□□□ -0.16
HIF3A-205ENST00000377670 HSPA5P11021 654 aaKnown RBP14.07□□□□□ -0.16
HIF3A-205ENST00000377670 TRIM44Q96DX7 344 aaPredicted RBP14.06□□□□□ -0.16
HIF3A-205ENST00000377670 SUPT16HQ9Y5B9 1047 aaKnown RBP14.06□□□□□ -0.16
HIF3A-205ENST00000377670 AQRO60306 1485 aaKnown RBP eCLIP14.06□□□□□ -0.16
HIF3A-205ENST00000377670 ZNF330Q9Y3S2 320 aaPredicted RBP14.05□□□□□ -0.16
HIF3A-205ENST00000377670 NUP155O75694 1391 aa14.05□□□□□ -0.16
HIF3A-205ENST00000377670 NCAPD3P42695 1498 aa14.04□□□□□ -0.16
HIF3A-205ENST00000377670 FAM69CQ0P6D2 419 aa14.04□□□□□ -0.16
HIF3A-205ENST00000377670 NUTM2DQ5VT03 806 aaPredicted RBP14.03□□□□□ -0.16
HIF3A-205ENST00000377670 MSH5O43196 834 aa14.02□□□□□ -0.16
HIF3A-205ENST00000377670 U2SURPO15042 1029 aaKnown RBP14.02□□□□□ -0.17
HIF3A-205ENST00000377670 WASHC2CQ9Y4E1 1318 aa14.02□□□□□ -0.17
HIF3A-205ENST00000377670 G3V3G9 751 aa14.01□□□□□ -0.17
HIF3A-205ENST00000377670 KIF3BO15066 747 aa14.01□□□□□ -0.17
HIF3A-205ENST00000377670 DCAF8Q5TAQ9 597 aa14.01□□□□□ -0.17
HIF3A-205ENST00000377670 SYNJ1O43426 1573 aa14.01□□□□□ -0.17
HIF3A-205ENST00000377670 GAPVD1Q14C86 1478 aa14.01□□□□□ -0.17
HIF3A-205ENST00000377670 ISY1Q9ULR0 285 aaKnown RBP14.01□□□□□ -0.17
HIF3A-205ENST00000377670 PNNQ9H307 717 aaKnown RBP14□□□□□ -0.17
HIF3A-205ENST00000377670 HDGFL2Q7Z4V5 671 aaPredicted RBP14□□□□□ -0.17
HIF3A-205ENST00000377670 BECN1Q14457 450 aa14□□□□□ -0.17
HIF3A-205ENST00000377670 OS9Q13438 667 aaPredicted RBP14□□□□□ -0.17
HIF3A-205ENST00000377670 L3MBTL2Q969R5 705 aa13.99□□□□□ -0.17
HIF3A-205ENST00000377670 NAP1L5Q96NT1 182 aaPredicted RBP13.99□□□□□ -0.17
HIF3A-205ENST00000377670 NGDNQ8NEJ9 315 aaKnown RBP13.98□□□□□ -0.17
HIF3A-205ENST00000377670 ZNF644Q9H582 1327 aaPredicted RBP13.98□□□□□ -0.17
HIF3A-205ENST00000377670 RTF1Q92541 710 aaKnown RBP13.98□□□□□ -0.17
HIF3A-205ENST00000377670 EVA1CP58658 441 aa13.97□□□□□ -0.17
HIF3A-205ENST00000377670 SPAG9O60271 1321 aaKnown RBP13.96□□□□□ -0.17
HIF3A-205ENST00000377670 ERICH6BQ5W0A0 696 aa13.96□□□□□ -0.17
HIF3A-205ENST00000377670 NOP58Q9Y2X3 529 aaKnown RBP13.96□□□□□ -0.17
HIF3A-205ENST00000377670 KLHL34Q8N239 644 aa13.96□□□□□ -0.17
HIF3A-205ENST00000377670 BICRAQ9NZM4 1560 aa13.94□□□□□ -0.18
HIF3A-205ENST00000377670 ANKRD30AQ9BXX3 1397 aa13.94□□□□□ -0.18
HIF3A-205ENST00000377670 CC2D2AQ9P2K1 1620 aa13.94□□□□□ -0.18
HIF3A-205ENST00000377670 TMF1P82094 1093 aa13.92□□□□□ -0.18
HIF3A-205ENST00000377670 DHX57Q6P158 1386 aaKnown RBP13.92□□□□□ -0.18
HIF3A-205ENST00000377670 PTPRGP23470 1445 aa13.92□□□□□ -0.18
HIF3A-205ENST00000377670 NCLP19338 710 aaKnown RBP13.92□□□□□ -0.18
HIF3A-205ENST00000377670 DEKP35659 375 aaKnown RBP13.91□□□□□ -0.18
HIF3A-205ENST00000377670 CCDC18Q5T9S5 1454 aa13.91□□□□□ -0.18
HIF3A-205ENST00000377670 GTF2E1P29083 439 aaPredicted RBP13.91□□□□□ -0.18
HIF3A-205ENST00000377670 FTSJ3Q8IY81 847 aaKnown RBP13.91□□□□□ -0.18
HIF3A-205ENST00000377670 CFTRP13569 1480 aa13.9□□□□□ -0.18
HIF3A-205ENST00000377670 KIF21BO75037 1637 aa13.9□□□□□ -0.18
HIF3A-205ENST00000377670 GOLGA6L22H0YM25 854 aa13.9□□□□□ -0.18
HIF3A-205ENST00000377670 TAOK2Q9UL54 1235 aa13.89□□□□□ -0.19
HIF3A-205ENST00000377670 ROCK2O75116 1388 aaKnown RBP13.89□□□□□ -0.19
HIF3A-205ENST00000377670 SF3B2Q13435 895 aaKnown RBP13.89□□□□□ -0.19
HIF3A-205ENST00000377670 PTMAP06454 111 aaKnown RBP13.89□□□□□ -0.19
HIF3A-205ENST00000377670 NUTM2FA1L443 756 aa13.88□□□□□ -0.19
HIF3A-205ENST00000377670 DNTTIP2Q5QJE6 756 aaKnown RBP13.88□□□□□ -0.19
HIF3A-205ENST00000377670 TIMELESSQ9UNS1 1208 aa13.88□□□□□ -0.19
HIF3A-205ENST00000377670 PHLDB1Q86UU1 1377 aa13.88□□□□□ -0.19
HIF3A-205ENST00000377670 CASC1Q6TDU7 716 aa13.87□□□□□ -0.19
HIF3A-205ENST00000377670 MORC1Q86VD1 984 aa13.87□□□□□ -0.19
HIF3A-205ENST00000377670 PPP4R2Q9NY27 417 aa13.87□□□□□ -0.19
HIF3A-205ENST00000377670 FRAT1Q92837 279 aaPredicted RBP13.86□□□□□ -0.19
HIF3A-205ENST00000377670 ARAP1Q96P48 1450 aa13.86□□□□□ -0.19
HIF3A-205ENST00000377670 CUX1P39880 1505 aa13.86□□□□□ -0.19
HIF3A-205ENST00000377670 B4GALNT3Q6L9W6 998 aa13.85□□□□□ -0.19
HIF3A-205ENST00000377670 ATF3P18847 181 aa13.85□□□□□ -0.19
HIF3A-205ENST00000377670 CLSTN1O94985 981 aa13.84□□□□□ -0.19
HIF3A-205ENST00000377670 FGD1P98174 961 aa13.84□□□□□ -0.19
HIF3A-205ENST00000377670 AMPHP49418 695 aa13.82□□□□□ -0.2
HIF3A-205ENST00000377670 TPRNQ4KMQ1 711 aa13.82□□□□□ -0.2
HIF3A-205ENST00000377670 CHMP4BQ9H444 224 aaKnown RBP13.82□□□□□ -0.2
HIF3A-205ENST00000377670 RBM19Q9Y4C8 960 aaKnown RBP13.82□□□□□ -0.2
HIF3A-205ENST00000377670 RSPH4AQ5TD94 716 aa13.81□□□□□ -0.2
HIF3A-205ENST00000377670 LTV1Q96GA3 475 aaPredicted RBP13.81□□□□□ -0.2
HIF3A-205ENST00000377670 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.81□□□□□ -0.2
HIF3A-205ENST00000377670 PRDM2Q13029 1718 aa13.81□□□□□ -0.2
HIF3A-205ENST00000377670 NCBP3Q53F19 620 aaKnown RBP13.81□□□□□ -0.2
HIF3A-205ENST00000377670 ZRSR1Q15695 479 aaKnown RBP13.8□□□□□ -0.2
HIF3A-205ENST00000377670 ST20-MTHFSA0A0A6YYL1 179 aa13.8□□□□□ -0.2
HIF3A-205ENST00000377670 KCNJ4P48050 445 aa13.8□□□□□ -0.2
HIF3A-205ENST00000377670 NAP1L2Q9ULW6 460 aaPredicted RBP13.8□□□□□ -0.2
HIF3A-205ENST00000377670 TRAK1Q9UPV9 953 aa13.8□□□□□ -0.2
HIF3A-205ENST00000377670 TAF7LQ5H9L4 462 aa13.8□□□□□ -0.2
HIF3A-205ENST00000377670 POLA1P09884 1462 aaPredicted RBP13.79□□□□□ -0.2
HIF3A-205ENST00000377670 CHMP4AQ9BY43 222 aa13.78□□□□□ -0.2
HIF3A-205ENST00000377670 TOPBP1Q92547 1522 aa13.78□□□□□ -0.2
HIF3A-205ENST00000377670 RGS3P49796 1198 aa13.78□□□□□ -0.2
HIF3A-205ENST00000377670 TERF2IPQ9NYB0 399 aa13.77□□□□□ -0.2
HIF3A-205ENST00000377670 UNC13AQ9UPW8 1703 aa13.76□□□□□ -0.21
HIF3A-205ENST00000377670 LRRC9Q6ZRR7 1453 aa13.76□□□□□ -0.21
HIF3A-205ENST00000377670 FGD6Q6ZV73 1430 aa13.76□□□□□ -0.21
HIF3A-205ENST00000377670 SYTL4Q96C24 671 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms