RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 TROQ12816 1431 aaPredicted RBP16.55■□□□□ 0.24
TNFRSF9-201ENST00000377507 CEP170Q5SW79 1584 aa16.55■□□□□ 0.24
TNFRSF9-201ENST00000377507 ANKRD30BQ9BXX2 1392 aa16.55■□□□□ 0.24
TNFRSF9-201ENST00000377507 NUP160Q12769 1436 aa16.53■□□□□ 0.24
TNFRSF9-201ENST00000377507 RPRD2Q5VT52 1461 aaKnown RBP16.52■□□□□ 0.24
TNFRSF9-201ENST00000377507 ZNF644Q9H582 1327 aaPredicted RBP16.52■□□□□ 0.24
TNFRSF9-201ENST00000377507 ADCY10Q96PN6 1610 aa16.52■□□□□ 0.23
TNFRSF9-201ENST00000377507 ERCC6Q03468 1493 aa16.51■□□□□ 0.23
TNFRSF9-201ENST00000377507 PRG4Q92954 1404 aaPredicted RBP16.51■□□□□ 0.23
TNFRSF9-201ENST00000377507 CHMP7Q8WUX9 453 aaPredicted RBP16.51■□□□□ 0.23
TNFRSF9-201ENST00000377507 L3MBTL2Q969R5 705 aa16.51■□□□□ 0.23
TNFRSF9-201ENST00000377507 GPATCH8Q9UKJ3 1502 aaKnown RBP16.5■□□□□ 0.23
TNFRSF9-201ENST00000377507 HSPA5P11021 654 aaKnown RBP16.5■□□□□ 0.23
TNFRSF9-201ENST00000377507 PLB1Q6P1J6 1458 aa16.49■□□□□ 0.23
TNFRSF9-201ENST00000377507 WASHC2AQ641Q2 1341 aa16.49■□□□□ 0.23
TNFRSF9-201ENST00000377507 ITSN2Q9NZM3 1697 aa16.49■□□□□ 0.23
TNFRSF9-201ENST00000377507 CAMSAP2Q08AD1 1489 aa16.48■□□□□ 0.23
TNFRSF9-201ENST00000377507 CARMIL2Q6F5E8 1435 aa16.48■□□□□ 0.23
TNFRSF9-201ENST00000377507 EIF4G2P78344 907 aaKnown RBP eCLIP16.48■□□□□ 0.23
TNFRSF9-201ENST00000377507 TEX14Q8IWB6 1497 aa16.48■□□□□ 0.23
TNFRSF9-201ENST00000377507 NCOA1Q15788 1441 aa16.47■□□□□ 0.23
TNFRSF9-201ENST00000377507 ADGRL2O95490 1459 aa16.47■□□□□ 0.23
TNFRSF9-201ENST00000377507 JPH4Q96JJ6 628 aa16.47■□□□□ 0.23
TNFRSF9-201ENST00000377507 FOXD1Q16676 465 aa16.45■□□□□ 0.22
TNFRSF9-201ENST00000377507 CFDP1Q9UEE9 299 aaPredicted RBP16.45■□□□□ 0.22
TNFRSF9-201ENST00000377507 PZPP20742 1482 aa16.44■□□□□ 0.22
TNFRSF9-201ENST00000377507 KIF14Q15058 1648 aa16.44■□□□□ 0.22
TNFRSF9-201ENST00000377507 ADGBQ8N7X0 1667 aa16.44■□□□□ 0.22
TNFRSF9-201ENST00000377507 ABCA8O94911 1581 aa16.43■□□□□ 0.22
TNFRSF9-201ENST00000377507 SLC4A1APQ9BWU0 796 aaKnown RBP16.43■□□□□ 0.22
TNFRSF9-201ENST00000377507 CROCC2H7BZ55 1655 aa16.42■□□□□ 0.22
TNFRSF9-201ENST00000377507 SPATA31E1Q6ZUB1 1445 aa16.42■□□□□ 0.22
TNFRSF9-201ENST00000377507 NBPF8Q3BBV2 869 aa16.41■□□□□ 0.22
TNFRSF9-201ENST00000377507 CNTLNQ9NXG0 1405 aa16.4■□□□□ 0.22
TNFRSF9-201ENST00000377507 ABCC10Q5T3U5 1492 aa16.4■□□□□ 0.22
TNFRSF9-201ENST00000377507 CCDC7Q96M83 1385 aa16.39■□□□□ 0.21
TNFRSF9-201ENST00000377507 ANKRD30AQ9BXX3 1397 aa16.38■□□□□ 0.21
TNFRSF9-201ENST00000377507 ATP10BO94823 1461 aa16.37■□□□□ 0.21
TNFRSF9-201ENST00000377507 KIAA1107Q9UPP5 1409 aa16.37■□□□□ 0.21
TNFRSF9-201ENST00000377507 C11orf95C9JLR9 678 aaPredicted RBP16.37■□□□□ 0.21
TNFRSF9-201ENST00000377507 MBD5Q9P267 1494 aa16.37■□□□□ 0.21
TNFRSF9-201ENST00000377507 SHANK2Q9UPX8 1470 aa16.37■□□□□ 0.21
TNFRSF9-201ENST00000377507 FBLN2P98095 1184 aa16.37■□□□□ 0.21
TNFRSF9-201ENST00000377507 PLEKHD1A6NEE1 506 aa16.36■□□□□ 0.21
TNFRSF9-201ENST00000377507 FKBP8Q14318 412 aa16.36■□□□□ 0.21
TNFRSF9-201ENST00000377507 CDC42BPAQ5VT25 1732 aa16.35■□□□□ 0.21
TNFRSF9-201ENST00000377507 TSHZ2Q9NRE2 1034 aa16.33■□□□□ 0.21
TNFRSF9-201ENST00000377507 ANKRD50Q9ULJ7 1429 aa16.33■□□□□ 0.21
TNFRSF9-201ENST00000377507 POLR1AO95602 1720 aaPredicted RBP16.33■□□□□ 0.2
TNFRSF9-201ENST00000377507 ZNF777Q9ULD5 760 aaPredicted RBP16.32■□□□□ 0.2
TNFRSF9-201ENST00000377507 NEFLP07196 543 aa16.31■□□□□ 0.2
TNFRSF9-201ENST00000377507 PRKRIP1Q9H875 184 aaPredicted RBP16.31■□□□□ 0.2
TNFRSF9-201ENST00000377507 KDM5DQ9BY66 1539 aa16.3■□□□□ 0.2
TNFRSF9-201ENST00000377507 C9orf84Q5VXU9 1444 aa16.3■□□□□ 0.2
TNFRSF9-201ENST00000377507 MYT1Q01538 1121 aa16.29■□□□□ 0.2
TNFRSF9-201ENST00000377507 KIF7Q2M1P5 1343 aa16.29■□□□□ 0.2
TNFRSF9-201ENST00000377507 PKD2Q13563 968 aa16.29■□□□□ 0.2
TNFRSF9-201ENST00000377507 ARHGEF5Q12774 1597 aa16.28■□□□□ 0.2
TNFRSF9-201ENST00000377507 HNRNPUQ00839 825 aaKnown RBP eCLIP16.27■□□□□ 0.2
TNFRSF9-201ENST00000377507 UHRF1BP1Q6BDS2 1440 aa16.27■□□□□ 0.2
TNFRSF9-201ENST00000377507 PTPRGP23470 1445 aa16.27■□□□□ 0.19
TNFRSF9-201ENST00000377507 BCANQ96GW7 911 aa16.25■□□□□ 0.19
TNFRSF9-201ENST00000377507 CCDC184Q52MB2 194 aa16.24■□□□□ 0.19
TNFRSF9-201ENST00000377507 ARID4BQ4LE39 1312 aaPredicted RBP16.24■□□□□ 0.19
TNFRSF9-201ENST00000377507 NUP155O75694 1391 aa16.24■□□□□ 0.19
TNFRSF9-201ENST00000377507 ARHGEF12Q9NZN5 1544 aa16.24■□□□□ 0.19
TNFRSF9-201ENST00000377507 TSPY4P0CV99 314 aa16.23■□□□□ 0.19
TNFRSF9-201ENST00000377507 TSPY10P0CW01 314 aa16.23■□□□□ 0.19
TNFRSF9-201ENST00000377507 RSPH4AQ5TD94 716 aa16.22■□□□□ 0.19
TNFRSF9-201ENST00000377507 KDM5CP41229 1560 aa16.21■□□□□ 0.19
TNFRSF9-201ENST00000377507 USP47Q96K76 1375 aa16.21■□□□□ 0.19
TNFRSF9-201ENST00000377507 RALGAPBQ86X10 1494 aa16.2■□□□□ 0.18
TNFRSF9-201ENST00000377507 KIF15Q9NS87 1388 aa16.2■□□□□ 0.18
TNFRSF9-201ENST00000377507 DHX29Q7Z478 1369 aaKnown RBP16.2■□□□□ 0.18
TNFRSF9-201ENST00000377507 PREX2Q70Z35 1606 aa16.19■□□□□ 0.18
TNFRSF9-201ENST00000377507 SAMD9LQ8IVG5 1584 aa16.19■□□□□ 0.18
TNFRSF9-201ENST00000377507 BCORL1Q5H9F3 1711 aa16.19■□□□□ 0.18
TNFRSF9-201ENST00000377507 CCDC141Q6ZP82 1450 aa16.19■□□□□ 0.18
TNFRSF9-201ENST00000377507 CDC42BPBQ9Y5S2 1711 aa16.18■□□□□ 0.18
TNFRSF9-201ENST00000377507 SHROOM2Q13796 1616 aa16.18■□□□□ 0.18
TNFRSF9-201ENST00000377507 HNRNPMP52272 730 aaKnown RBP eCLIP16.18■□□□□ 0.18
TNFRSF9-201ENST00000377507 ERICH6BQ5W0A0 696 aa16.17■□□□□ 0.18
TNFRSF9-201ENST00000377507 MRS2Q9HD23 443 aa16.17■□□□□ 0.18
TNFRSF9-201ENST00000377507 ZBED9Q6R2W3 1325 aa16.16■□□□□ 0.18
TNFRSF9-201ENST00000377507 MAST1Q9Y2H9 1570 aa16.15■□□□□ 0.18
TNFRSF9-201ENST00000377507 ROCK2O75116 1388 aaKnown RBP16.14■□□□□ 0.17
TNFRSF9-201ENST00000377507 CHD1O14646 1710 aa16.13■□□□□ 0.17
TNFRSF9-201ENST00000377507 FAM135AQ9P2D6 1515 aa16.13■□□□□ 0.17
TNFRSF9-201ENST00000377507 FAM9BQ8IZU0 186 aa16.12■□□□□ 0.17
TNFRSF9-201ENST00000377507 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.1■□□□□ 0.17
TNFRSF9-201ENST00000377507 ZNF326Q5BKZ1 582 aaKnown RBP16.1■□□□□ 0.17
TNFRSF9-201ENST00000377507 UNC13BO14795 1591 aa16.1■□□□□ 0.17
TNFRSF9-201ENST00000377507 TTC37Q6PGP7 1564 aa16.09■□□□□ 0.17
TNFRSF9-201ENST00000377507 CARD11Q9BXL7 1154 aa16.09■□□□□ 0.17
TNFRSF9-201ENST00000377507 ABCC2Q92887 1545 aa16.09■□□□□ 0.17
TNFRSF9-201ENST00000377507 PLEKHH2Q8IVE3 1493 aa16.08■□□□□ 0.17
TNFRSF9-201ENST00000377507 SYCP2Q9BX26 1530 aa16.08■□□□□ 0.16
TNFRSF9-201ENST00000377507 PLXNC1O60486 1568 aa16.07■□□□□ 0.16
TNFRSF9-201ENST00000377507 ARHGAP5Q13017 1502 aa16.06■□□□□ 0.16
TNFRSF9-201ENST00000377507 DCAF11Q8TEB1 546 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms