RNA–Protein interactions for RNA: ENST00000377181.2

KCNIP3-203, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 5

Gene KCNIP3, Length 2,971 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-203ENST00000377181 SLC4A1APQ9BWU0 796 aaKnown RBP17.67■□□□□ 0.42
KCNIP3-203ENST00000377181 PRKRIP1Q9H875 184 aaPredicted RBP17.67■□□□□ 0.42
KCNIP3-203ENST00000377181 CDK11AQ9UQ88 783 aaPredicted RBP17.67■□□□□ 0.42
KCNIP3-203ENST00000377181 PDS5BQ9NTI5 1447 aa17.67■□□□□ 0.42
KCNIP3-203ENST00000377181 LAMC3Q9Y6N6 1575 aa17.67■□□□□ 0.42
KCNIP3-203ENST00000377181 ZNF777Q9ULD5 760 aaPredicted RBP17.67■□□□□ 0.42
KCNIP3-203ENST00000377181 SUPT6HQ7KZ85 1726 aaKnown RBP17.66■□□□□ 0.42
KCNIP3-203ENST00000377181 SAMD9Q5K651 1589 aa17.66■□□□□ 0.42
KCNIP3-203ENST00000377181 UGGT2Q9NYU1 1516 aa17.66■□□□□ 0.42
KCNIP3-203ENST00000377181 EHBP1L1Q8N3D4 1523 aa17.64■□□□□ 0.41
KCNIP3-203ENST00000377181 CCDC7Q96M83 1385 aa17.62■□□□□ 0.41
KCNIP3-203ENST00000377181 KIF7Q2M1P5 1343 aa17.62■□□□□ 0.41
KCNIP3-203ENST00000377181 CNTLNQ9NXG0 1405 aa17.61■□□□□ 0.41
KCNIP3-203ENST00000377181 EPRSP07814 1512 aaKnown RBP17.61■□□□□ 0.41
KCNIP3-203ENST00000377181 ABCA5Q8WWZ7 1642 aa17.6■□□□□ 0.41
KCNIP3-203ENST00000377181 THOC2Q8NI27 1593 aaKnown RBP17.59■□□□□ 0.41
KCNIP3-203ENST00000377181 ARXQ96QS3 562 aa17.58■□□□□ 0.41
KCNIP3-203ENST00000377181 KLHL34Q8N239 644 aa17.56■□□□□ 0.4
KCNIP3-203ENST00000377181 ARHGEF11O15085 1522 aa17.55■□□□□ 0.4
KCNIP3-203ENST00000377181 PPP4R2Q9NY27 417 aa17.55■□□□□ 0.4
KCNIP3-203ENST00000377181 ANKRD30BQ9BXX2 1392 aa17.55■□□□□ 0.4
KCNIP3-203ENST00000377181 NCOA1Q15788 1441 aa17.54■□□□□ 0.4
KCNIP3-203ENST00000377181 FBLN2P98095 1184 aa17.54■□□□□ 0.4
KCNIP3-203ENST00000377181 TCOF1Q13428 1488 aaKnown RBP17.53■□□□□ 0.4
KCNIP3-203ENST00000377181 KDM2AQ9Y2K7 1162 aa17.52■□□□□ 0.39
KCNIP3-203ENST00000377181 ABCC5O15440 1437 aa17.51■□□□□ 0.39
KCNIP3-203ENST00000377181 DAPK1P53355 1430 aa17.51■□□□□ 0.39
KCNIP3-203ENST00000377181 SALL2Q9Y467 1007 aaPredicted RBP17.51■□□□□ 0.39
KCNIP3-203ENST00000377181 AKNAQ7Z591 1439 aa17.5■□□□□ 0.39
KCNIP3-203ENST00000377181 CFDP1Q9UEE9 299 aaPredicted RBP17.49■□□□□ 0.39
KCNIP3-203ENST00000377181 PKD2Q13563 968 aa17.49■□□□□ 0.39
KCNIP3-203ENST00000377181 HECW1Q76N89 1606 aa17.49■□□□□ 0.39
KCNIP3-203ENST00000377181 ZBED9Q6R2W3 1325 aa17.48■□□□□ 0.39
KCNIP3-203ENST00000377181 IQGAP2Q13576 1575 aa17.48■□□□□ 0.39
KCNIP3-203ENST00000377181 ZNF608Q9ULD9 1512 aaPredicted RBP17.48■□□□□ 0.39
KCNIP3-203ENST00000377181 PRG4Q92954 1404 aaPredicted RBP17.47■□□□□ 0.39
KCNIP3-203ENST00000377181 ERCC6Q03468 1493 aa17.46■□□□□ 0.39
KCNIP3-203ENST00000377181 RPRD2Q5VT52 1461 aaKnown RBP17.46■□□□□ 0.39
KCNIP3-203ENST00000377181 GCC2Q8IWJ2 1684 aa17.46■□□□□ 0.39
KCNIP3-203ENST00000377181 MIA2Q96PC5 1412 aa17.46■□□□□ 0.39
KCNIP3-203ENST00000377181 TEX14Q8IWB6 1497 aa17.45■□□□□ 0.38
KCNIP3-203ENST00000377181 TARBP1Q13395 1621 aaKnown RBP17.45■□□□□ 0.38
KCNIP3-203ENST00000377181 FANCIQ9NVI1 1328 aa17.44■□□□□ 0.38
KCNIP3-203ENST00000377181 WDR62O43379 1518 aa17.44■□□□□ 0.38
KCNIP3-203ENST00000377181 SPATA31E1Q6ZUB1 1445 aa17.42■□□□□ 0.38
KCNIP3-203ENST00000377181 MRC2Q9UBG0 1479 aa17.42■□□□□ 0.38
KCNIP3-203ENST00000377181 USP47Q96K76 1375 aa17.42■□□□□ 0.38
KCNIP3-203ENST00000377181 NBR1Q14596 966 aa17.4■□□□□ 0.38
KCNIP3-203ENST00000377181 NUP153P49790 1475 aaKnown RBP17.4■□□□□ 0.38
KCNIP3-203ENST00000377181 TMC1Q8TDI8 760 aa17.38■□□□□ 0.37
KCNIP3-203ENST00000377181 CARD11Q9BXL7 1154 aa17.38■□□□□ 0.37
KCNIP3-203ENST00000377181 PAK3O75914 559 aaPredicted RBP17.38■□□□□ 0.37
KCNIP3-203ENST00000377181 DHX29Q7Z478 1369 aaKnown RBP17.38■□□□□ 0.37
KCNIP3-203ENST00000377181 CCDC136Q96JN2 1154 aa17.37■□□□□ 0.37
KCNIP3-203ENST00000377181 PZPP20742 1482 aa17.37■□□□□ 0.37
KCNIP3-203ENST00000377181 PLB1Q6P1J6 1458 aa17.36■□□□□ 0.37
KCNIP3-203ENST00000377181 ST20-MTHFSA0A0A6YYL1 179 aa17.36■□□□□ 0.37
KCNIP3-203ENST00000377181 ROCK1Q13464 1354 aa17.36■□□□□ 0.37
KCNIP3-203ENST00000377181 ADAMTS12P58397 1594 aa17.36■□□□□ 0.37
KCNIP3-203ENST00000377181 DISP1Q96F81 1524 aa17.36■□□□□ 0.37
KCNIP3-203ENST00000377181 PBRM1Q86U86 1689 aa17.36■□□□□ 0.37
KCNIP3-203ENST00000377181 DCAF11Q8TEB1 546 aa17.35■□□□□ 0.37
KCNIP3-203ENST00000377181 CHMP7Q8WUX9 453 aaPredicted RBP17.35■□□□□ 0.37
KCNIP3-203ENST00000377181 TULP1O00294 542 aaPredicted RBP17.34■□□□□ 0.37
KCNIP3-203ENST00000377181 NUDCQ9Y266 331 aa17.34■□□□□ 0.37
KCNIP3-203ENST00000377181 RGL3Q3MIN7 710 aa17.33■□□□□ 0.37
KCNIP3-203ENST00000377181 NUP155O75694 1391 aa17.33■□□□□ 0.36
KCNIP3-203ENST00000377181 ERICH6BQ5W0A0 696 aa17.32■□□□□ 0.36
KCNIP3-203ENST00000377181 CAMSAP2Q08AD1 1489 aa17.32■□□□□ 0.36
KCNIP3-203ENST00000377181 HNRNPMP52272 730 aaKnown RBP eCLIP17.32■□□□□ 0.36
KCNIP3-203ENST00000377181 PNISRQ8TF01 805 aaKnown RBP17.31■□□□□ 0.36
KCNIP3-203ENST00000377181 DNMT1P26358 1616 aaKnown RBP17.31■□□□□ 0.36
KCNIP3-203ENST00000377181 BCORL1Q5H9F3 1711 aa17.3■□□□□ 0.36
KCNIP3-203ENST00000377181 UBE2Q2Q8WVN8 375 aa17.3■□□□□ 0.36
KCNIP3-203ENST00000377181 KIAA1107Q9UPP5 1409 aa17.29■□□□□ 0.36
KCNIP3-203ENST00000377181 NPM2Q86SE8 214 aaKnown RBP17.28■□□□□ 0.36
KCNIP3-203ENST00000377181 GPATCH8Q9UKJ3 1502 aaKnown RBP17.27■□□□□ 0.36
KCNIP3-203ENST00000377181 KIAA0556O60303 1618 aa17.27■□□□□ 0.36
KCNIP3-203ENST00000377181 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.27■□□□□ 0.36
KCNIP3-203ENST00000377181 KIAA0586Q9BVV6 1533 aa17.27■□□□□ 0.35
KCNIP3-203ENST00000377181 SMG6Q86US8 1419 aaKnown RBP17.26■□□□□ 0.35
KCNIP3-203ENST00000377181 ANKRD50Q9ULJ7 1429 aa17.26■□□□□ 0.35
KCNIP3-203ENST00000377181 SKAP1Q86WV1 359 aa17.26■□□□□ 0.35
KCNIP3-203ENST00000377181 TROQ12816 1431 aaPredicted RBP17.26■□□□□ 0.35
KCNIP3-203ENST00000377181 KIF14Q15058 1648 aa17.26■□□□□ 0.35
KCNIP3-203ENST00000377181 NOP58Q9Y2X3 529 aaKnown RBP17.25■□□□□ 0.35
KCNIP3-203ENST00000377181 AMER1Q5JTC6 1135 aaPredicted RBP17.25■□□□□ 0.35
KCNIP3-203ENST00000377181 ANKRD30AQ9BXX3 1397 aa17.25■□□□□ 0.35
KCNIP3-203ENST00000377181 EXOC6Q8TAG9 804 aa17.24■□□□□ 0.35
KCNIP3-203ENST00000377181 JPH4Q96JJ6 628 aa17.24■□□□□ 0.35
KCNIP3-203ENST00000377181 PLEKHD1A6NEE1 506 aa17.24■□□□□ 0.35
KCNIP3-203ENST00000377181 RAPGEF6Q8TEU7 1601 aa17.24■□□□□ 0.35
KCNIP3-203ENST00000377181 NBPF1Q3BBV0 1214 aa17.23■□□□□ 0.35
KCNIP3-203ENST00000377181 CC2D1BQ5T0F9 858 aaKnown RBP17.23■□□□□ 0.35
KCNIP3-203ENST00000377181 TSPY4P0CV99 314 aa17.22■□□□□ 0.35
KCNIP3-203ENST00000377181 TSPY10P0CW01 314 aa17.22■□□□□ 0.35
KCNIP3-203ENST00000377181 DEKP35659 375 aaKnown RBP17.22■□□□□ 0.35
KCNIP3-203ENST00000377181 CDCA7LQ96GN5 454 aa17.22■□□□□ 0.35
KCNIP3-203ENST00000377181 IFT140Q96RY7 1462 aa17.22■□□□□ 0.35
KCNIP3-203ENST00000377181 PLIN1O60240 522 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms