RNA–Protein interactions for RNA: ENST00000376959.6

KCNC3-201, Transcript of potassium voltage-gated channel subfamily C member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNC3, Length 5,447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC3-201ENST00000376959 HTATSF1O43719 755 aaKnown RBP28.2■■■□□ 2.1
KCNC3-201ENST00000376959 GOLGA2Q08379 1002 aa28.18■■■□□ 2.1
KCNC3-201ENST00000376959 IPO8O15397 1037 aaKnown RBP28.17■■■□□ 2.1
KCNC3-201ENST00000376959 RWDD1Q9H446 243 aaPredicted RBP28.17■■■□□ 2.1
KCNC3-201ENST00000376959 GNL2Q13823 731 aaKnown RBP28.17■■■□□ 2.1
KCNC3-201ENST00000376959 KIAA1211Q6ZU35 1233 aa28.17■■■□□ 2.1
KCNC3-201ENST00000376959 RCAN3Q9UKA8 241 aa28.15■■■□□ 2.1
KCNC3-201ENST00000376959 TPM4P67936 248 aa28.11■■■□□ 2.09
KCNC3-201ENST00000376959 GOLGA6L1Q8N7Z2 621 aa28.11■■■□□ 2.09
KCNC3-201ENST00000376959 HSP90AA2PQ14568 343 aaPredicted RBP28.1■■■□□ 2.09
KCNC3-201ENST00000376959 NOC3LQ8WTT2 800 aaKnown RBP28.1■■■□□ 2.09
KCNC3-201ENST00000376959 RSPH6AQ9H0K4 717 aa28.09■■■□□ 2.09
KCNC3-201ENST00000376959 MORC1Q86VD1 984 aa28.08■■■□□ 2.09
KCNC3-201ENST00000376959 CALD1Q05682 793 aaKnown RBP28.07■■■□□ 2.08
KCNC3-201ENST00000376959 CEP164Q9UPV0 1460 aa28.07■■■□□ 2.08
KCNC3-201ENST00000376959 KTN1Q86UP2 1357 aaKnown RBP28.07■■■□□ 2.08
KCNC3-201ENST00000376959 NPHP1O15259 732 aa28.06■■■□□ 2.08
KCNC3-201ENST00000376959 DCAF11Q8TEB1 546 aa28.05■■■□□ 2.08
KCNC3-201ENST00000376959 USP35Q9P2H5 1018 aa28.05■■■□□ 2.08
KCNC3-201ENST00000376959 CCNB3Q8WWL7 1395 aa28.04■■■□□ 2.08
KCNC3-201ENST00000376959 PMFBP1Q8TBY8 1022 aa28.04■■■□□ 2.08
KCNC3-201ENST00000376959 CLSTN1O94985 981 aa28.04■■■□□ 2.08
KCNC3-201ENST00000376959 HSPA5P11021 654 aaKnown RBP28.04■■■□□ 2.08
KCNC3-201ENST00000376959 CSPP1Q1MSJ5 1256 aa28.01■■■□□ 2.07
KCNC3-201ENST00000376959 APBB1O00213 710 aa28.01■■■□□ 2.07
KCNC3-201ENST00000376959 MFAP1P55081 439 aaKnown RBP27.99■■■□□ 2.07
KCNC3-201ENST00000376959 LMOD2Q6P5Q4 547 aa27.99■■■□□ 2.07
KCNC3-201ENST00000376959 ITPRIPQ8IWB1 547 aa27.98■■■□□ 2.07
KCNC3-201ENST00000376959 CCDC34Q96HJ3 373 aa27.97■■■□□ 2.07
KCNC3-201ENST00000376959 RALBP1Q15311 655 aa27.96■■■□□ 2.07
KCNC3-201ENST00000376959 PHF14O94880 888 aa27.95■■■□□ 2.07
KCNC3-201ENST00000376959 RTF1Q92541 710 aaKnown RBP27.95■■■□□ 2.06
KCNC3-201ENST00000376959 WRNQ14191 1432 aaPredicted RBP eCLIP27.93■■■□□ 2.062e-8■■■□□ 16.7
KCNC3-201ENST00000376959 KIF27Q86VH2 1401 aa27.93■■■□□ 2.06
KCNC3-201ENST00000376959 DDX11L8A8MPP1 907 aa27.91■■■□□ 2.06
KCNC3-201ENST00000376959 A0A0U1RQG5 324 aaPredicted RBP27.89■■■□□ 2.06
KCNC3-201ENST00000376959 SRPK2P78362 688 aaKnown RBP27.89■■■□□ 2.05
KCNC3-201ENST00000376959 VSIG10Q8N0Z9 540 aa27.88■■■□□ 2.05
KCNC3-201ENST00000376959 SETD5Q9C0A6 1442 aa27.86■■■□□ 2.05
KCNC3-201ENST00000376959 ISY1Q9ULR0 285 aaKnown RBP27.85■■■□□ 2.05
KCNC3-201ENST00000376959 SETQ01105 290 aaPredicted RBP27.84■■■□□ 2.05
KCNC3-201ENST00000376959 GSE1Q14687 1217 aa27.83■■■□□ 2.05
KCNC3-201ENST00000376959 HSP90B1P14625 803 aaKnown RBP27.82■■■□□ 2.04
KCNC3-201ENST00000376959 NCBP3Q53F19 620 aaKnown RBP27.82■■■□□ 2.04
KCNC3-201ENST00000376959 FHAD1B1AJZ9 1412 aa27.82■■■□□ 2.04
KCNC3-201ENST00000376959 TPM3P06753 285 aa27.82■■■□□ 2.04
KCNC3-201ENST00000376959 U2AF1L5P0DN76 240 aaPredicted RBP27.81■■■□□ 2.04
KCNC3-201ENST00000376959 U2AF1Q01081 240 aaKnown RBP eCLIP27.81■■■□□ 2.04
KCNC3-201ENST00000376959 PDE3BQ13370 1112 aa27.81■■■□□ 2.04
KCNC3-201ENST00000376959 ST18O60284 1047 aa27.8■■■□□ 2.04
KCNC3-201ENST00000376959 NACADO15069 1562 aa27.8■■■□□ 2.04
KCNC3-201ENST00000376959 KANK1Q14678 1352 aa27.8■■■□□ 2.04
KCNC3-201ENST00000376959 HMMRO75330 724 aa27.8■■■□□ 2.04
KCNC3-201ENST00000376959 GPATCH3Q96I76 525 aa27.78■■■□□ 2.04
KCNC3-201ENST00000376959 CHMP4AQ9BY43 222 aa27.78■■■□□ 2.04
KCNC3-201ENST00000376959 SKOR2Q2VWA4 1001 aaPredicted RBP27.78■■■□□ 2.04
KCNC3-201ENST00000376959 FOXD4L1Q9NU39 408 aa27.78■■■□□ 2.04
KCNC3-201ENST00000376959 HDGFL2Q7Z4V5 671 aaPredicted RBP27.76■■■□□ 2.03
KCNC3-201ENST00000376959 TRIM6-TRIM34B2RNG4 842 aa27.76■■■□□ 2.03
KCNC3-201ENST00000376959 SMC4Q9NTJ3 1288 aa27.76■■■□□ 2.03
KCNC3-201ENST00000376959 SOX12O15370 315 aa27.75■■■□□ 2.03
KCNC3-201ENST00000376959 HDAC5Q9UQL6 1122 aa27.73■■■□□ 2.03
KCNC3-201ENST00000376959 KIF3AQ9Y496 699 aa27.71■■■□□ 2.03
KCNC3-201ENST00000376959 HDGFP51858 240 aaKnown RBP27.7■■■□□ 2.03
KCNC3-201ENST00000376959 STK31Q9BXU1 1019 aa27.7■■■□□ 2.03
KCNC3-201ENST00000376959 DDX49Q9Y6V7 483 aaKnown RBP27.7■■■□□ 2.03
KCNC3-201ENST00000376959 KIF16BQ96L93 1317 aa27.7■■■□□ 2.03
KCNC3-201ENST00000376959 CENPJQ9HC77 1338 aaPredicted RBP27.7■■■□□ 2.02
KCNC3-201ENST00000376959 GPS2Q13227 327 aa27.7■■■□□ 2.02
KCNC3-201ENST00000376959 NOL8Q76FK4 1167 aaKnown RBP27.68■■■□□ 2.02
KCNC3-201ENST00000376959 FAM161AQ3B820 660 aa27.67■■■□□ 2.02
KCNC3-201ENST00000376959 PDE4AP27815 886 aa27.66■■■□□ 2.02
KCNC3-201ENST00000376959 ZNF771Q7L3S4 317 aaPredicted RBP27.66■■■□□ 2.02
KCNC3-201ENST00000376959 RASSF8Q8NHQ8 419 aa27.66■■■□□ 2.02
KCNC3-201ENST00000376959 ROCK2O75116 1388 aaKnown RBP27.65■■■□□ 2.02
KCNC3-201ENST00000376959 PKD2Q13563 968 aa27.65■■■□□ 2.02
KCNC3-201ENST00000376959 CENPQQ7L2Z9 268 aaPredicted RBP27.65■■■□□ 2.02
KCNC3-201ENST00000376959 SAFB2Q14151 953 aaKnown RBP eCLIP27.65■■■□□ 2.02
KCNC3-201ENST00000376959 CLUAP1Q96AJ1 413 aa27.64■■■□□ 2.02
KCNC3-201ENST00000376959 SF3A1Q15459 793 aaKnown RBP27.64■■■□□ 2.01
KCNC3-201ENST00000376959 GORABQ5T7V8 394 aa27.64■■■□□ 2.01
KCNC3-201ENST00000376959 NLRP13Q86W25 1043 aa27.63■■■□□ 2.01
KCNC3-201ENST00000376959 ATP6V1DQ9Y5K8 247 aa27.63■■■□□ 2.01
KCNC3-201ENST00000376959 CREBRFQ8IUR6 639 aa27.62■■■□□ 2.01
KCNC3-201ENST00000376959 GOLGA6L19H0YKK7 550 aa27.62■■■□□ 2.01
KCNC3-201ENST00000376959 CEP89Q96ST8 783 aa27.62■■■□□ 2.01
KCNC3-201ENST00000376959 SPAG9O60271 1321 aaKnown RBP27.61■■■□□ 2.01
KCNC3-201ENST00000376959 FANCIQ9NVI1 1328 aa27.61■■■□□ 2.01
KCNC3-201ENST00000376959 PHLDB1Q86UU1 1377 aa27.6■■■□□ 2.01
KCNC3-201ENST00000376959 FOXD4L5Q5VV16 416 aaPredicted RBP27.6■■■□□ 2.01
KCNC3-201ENST00000376959 FOXD4L4Q8WXT5 416 aaPredicted RBP27.6■■■□□ 2.01
KCNC3-201ENST00000376959 ARHGAP35Q9NRY4 1499 aa27.59■■■□□ 2.01
KCNC3-201ENST00000376959 BECN2A8MW95 431 aa27.57■■■□□ 2
KCNC3-201ENST00000376959 CCAR2Q8N163 923 aaKnown RBP27.57■■■□□ 2
KCNC3-201ENST00000376959 TSR1Q2NL82 804 aaKnown RBP27.57■■■□□ 2
KCNC3-201ENST00000376959 CCDC70Q6NSX1 233 aa27.56■■■□□ 2
KCNC3-201ENST00000376959 PDE4CQ08493 712 aa27.55■■■□□ 2
KCNC3-201ENST00000376959 SLC4A3P48751 1232 aa27.54■■■□□ 2
KCNC3-201ENST00000376959 CHMP4CQ96CF2 233 aa27.54■■■□□ 2
KCNC3-201ENST00000376959 TEX35Q5T0J7 233 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms