RNA–Protein interactions for RNA: ENST00000376251.5

CACNA1F-202, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 1 (best) BASIC

Gene CACNA1F, Length 5,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-202ENST00000376251 MPHOSPH9Q99550 1183 aa17.26■□□□□ 0.35
CACNA1F-202ENST00000376251 LAS1LQ9Y4W2 734 aaKnown RBP17.25■□□□□ 0.35
CACNA1F-202ENST00000376251 NEUROD2Q15784 382 aa17.24■□□□□ 0.35
CACNA1F-202ENST00000376251 U2SURPO15042 1029 aaKnown RBP17.24■□□□□ 0.35
CACNA1F-202ENST00000376251 NPHP1O15259 732 aa17.24■□□□□ 0.35
CACNA1F-202ENST00000376251 CFTRP13569 1480 aa17.23■□□□□ 0.35
CACNA1F-202ENST00000376251 FKBP8Q14318 412 aa17.23■□□□□ 0.35
CACNA1F-202ENST00000376251 IFT140Q96RY7 1462 aa17.23■□□□□ 0.35
CACNA1F-202ENST00000376251 HDGFL2Q7Z4V5 671 aaPredicted RBP17.22■□□□□ 0.35
CACNA1F-202ENST00000376251 HMGXB3Q12766 1538 aa17.21■□□□□ 0.35
CACNA1F-202ENST00000376251 SENP3-EIF4A1A0A087X0R7 540 aa17.2■□□□□ 0.34
CACNA1F-202ENST00000376251 UPF2Q9HAU5 1272 aaKnown RBP17.18■□□□□ 0.34
CACNA1F-202ENST00000376251 PRDM2Q13029 1718 aa17.17■□□□□ 0.34
CACNA1F-202ENST00000376251 MORC1Q86VD1 984 aa17.17■□□□□ 0.34
CACNA1F-202ENST00000376251 HSP90AA1P07900 732 aaKnown RBP17.16■□□□□ 0.34
CACNA1F-202ENST00000376251 CSB-PGBD3P0DP91 1061 aa17.16■□□□□ 0.34
CACNA1F-202ENST00000376251 ROCK2O75116 1388 aaKnown RBP17.16■□□□□ 0.34
CACNA1F-202ENST00000376251 PNNQ9H307 717 aaKnown RBP17.16■□□□□ 0.34
CACNA1F-202ENST00000376251 CCDC9Q9Y3X0 531 aaKnown RBP17.15■□□□□ 0.34
CACNA1F-202ENST00000376251 PRG4Q92954 1404 aaPredicted RBP17.15■□□□□ 0.34
CACNA1F-202ENST00000376251 MIER1Q8N108 512 aa17.15■□□□□ 0.34
CACNA1F-202ENST00000376251 RAB3GAP2Q9H2M9 1393 aa17.15■□□□□ 0.34
CACNA1F-202ENST00000376251 CCDC136Q96JN2 1154 aa17.15■□□□□ 0.34
CACNA1F-202ENST00000376251 ANP32AP39687 249 aaKnown RBP17.13■□□□□ 0.33
CACNA1F-202ENST00000376251 TIMELESSQ9UNS1 1208 aa17.12■□□□□ 0.33
CACNA1F-202ENST00000376251 TOPBP1Q92547 1522 aa17.12■□□□□ 0.33
CACNA1F-202ENST00000376251 EIF3AQ14152 1382 aaKnown RBP17.1■□□□□ 0.33
CACNA1F-202ENST00000376251 NGDNQ8NEJ9 315 aaKnown RBP17.1■□□□□ 0.33
CACNA1F-202ENST00000376251 SNAPC4Q5SXM2 1469 aa17.08■□□□□ 0.33
CACNA1F-202ENST00000376251 NUTM2FA1L443 756 aa17.08■□□□□ 0.33
CACNA1F-202ENST00000376251 BICRAQ9NZM4 1560 aa17.07■□□□□ 0.32
CACNA1F-202ENST00000376251 HSPA5P11021 654 aaKnown RBP17.07■□□□□ 0.32
CACNA1F-202ENST00000376251 FTSJ3Q8IY81 847 aaKnown RBP17.07■□□□□ 0.32
CACNA1F-202ENST00000376251 RTF1Q92541 710 aaKnown RBP17.05■□□□□ 0.32
CACNA1F-202ENST00000376251 POLA1P09884 1462 aaPredicted RBP17.04■□□□□ 0.32
CACNA1F-202ENST00000376251 IRX6P78412 446 aaPredicted RBP17.04■□□□□ 0.32
CACNA1F-202ENST00000376251 TRAK1Q9UPV9 953 aa17.03■□□□□ 0.32
CACNA1F-202ENST00000376251 CCDC144AA2RUR9 1427 aa17.02■□□□□ 0.32
CACNA1F-202ENST00000376251 TERF2IPQ9NYB0 399 aa17.02■□□□□ 0.32
CACNA1F-202ENST00000376251 SYNJ2O15056 1496 aa17.02■□□□□ 0.32
CACNA1F-202ENST00000376251 VGFO15240 615 aaPredicted RBP17.02■□□□□ 0.32
CACNA1F-202ENST00000376251 LAMC3Q9Y6N6 1575 aa17.01■□□□□ 0.31
CACNA1F-202ENST00000376251 UACAQ9BZF9 1416 aa17■□□□□ 0.31
CACNA1F-202ENST00000376251 DNMBPQ6XZF7 1577 aa17■□□□□ 0.31
CACNA1F-202ENST00000376251 ARHGAP5Q13017 1502 aa16.98■□□□□ 0.31
CACNA1F-202ENST00000376251 L3MBTL2Q969R5 705 aa16.98■□□□□ 0.31
CACNA1F-202ENST00000376251 SYNJ1O43426 1573 aa16.97■□□□□ 0.31
CACNA1F-202ENST00000376251 MYOM3Q5VTT5 1437 aa16.97■□□□□ 0.31
CACNA1F-202ENST00000376251 FRAT1Q92837 279 aaPredicted RBP16.97■□□□□ 0.31
CACNA1F-202ENST00000376251 ZNF644Q9H582 1327 aaPredicted RBP16.96■□□□□ 0.31
CACNA1F-202ENST00000376251 CUX1P39880 1505 aa16.96■□□□□ 0.31
CACNA1F-202ENST00000376251 KTN1Q86UP2 1357 aaKnown RBP16.96■□□□□ 0.31
CACNA1F-202ENST00000376251 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.95■□□□□ 0.3
CACNA1F-202ENST00000376251 OS9Q13438 667 aaPredicted RBP16.94■□□□□ 0.3
CACNA1F-202ENST00000376251 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.94■□□□□ 0.3
CACNA1F-202ENST00000376251 AMPHP49418 695 aa16.93■□□□□ 0.3
CACNA1F-202ENST00000376251 AFAP1Q8N556 730 aa16.93■□□□□ 0.3
CACNA1F-202ENST00000376251 ZNF330Q9Y3S2 320 aaPredicted RBP16.93■□□□□ 0.3
CACNA1F-202ENST00000376251 U2AF1L5P0DN76 240 aaPredicted RBP16.93■□□□□ 0.3
CACNA1F-202ENST00000376251 U2AF1Q01081 240 aaKnown RBP eCLIP16.93■□□□□ 0.3
CACNA1F-202ENST00000376251 KIF15Q9NS87 1388 aa16.91■□□□□ 0.3
CACNA1F-202ENST00000376251 LTV1Q96GA3 475 aaPredicted RBP16.91■□□□□ 0.3
CACNA1F-202ENST00000376251 GOLGA2Q08379 1002 aa16.91■□□□□ 0.3
CACNA1F-202ENST00000376251 TOP2BQ02880 1626 aa16.9■□□□□ 0.3
CACNA1F-202ENST00000376251 MEX3CQ5U5Q3 659 aaKnown RBP16.89■□□□□ 0.29
CACNA1F-202ENST00000376251 CASKIN1Q8WXD9 1431 aa16.89■□□□□ 0.29
CACNA1F-202ENST00000376251 CHMP4BQ9H444 224 aaKnown RBP16.88■□□□□ 0.29
CACNA1F-202ENST00000376251 EVA1CP58658 441 aa16.87■□□□□ 0.29
CACNA1F-202ENST00000376251 MINK1Q8N4C8 1332 aaPredicted RBP16.87■□□□□ 0.29
CACNA1F-202ENST00000376251 MS4A1P11836 297 aa16.87■□□□□ 0.29
CACNA1F-202ENST00000376251 CASC1Q6TDU7 716 aa16.85■□□□□ 0.29
CACNA1F-202ENST00000376251 ATF3P18847 181 aa16.85■□□□□ 0.29
CACNA1F-202ENST00000376251 EVC2Q86UK5 1308 aa16.84■□□□□ 0.29
CACNA1F-202ENST00000376251 FGD6Q6ZV73 1430 aa16.84■□□□□ 0.29
CACNA1F-202ENST00000376251 ERICH3Q5RHP9 1530 aa16.84■□□□□ 0.29
CACNA1F-202ENST00000376251 CALD1Q05682 793 aaKnown RBP16.83■□□□□ 0.29
CACNA1F-202ENST00000376251 KIF21BO75037 1637 aa16.83■□□□□ 0.28
CACNA1F-202ENST00000376251 FYCO1Q9BQS8 1478 aa16.83■□□□□ 0.28
CACNA1F-202ENST00000376251 PSME1Q06323 249 aa16.83■□□□□ 0.28
CACNA1F-202ENST00000376251 NCOA2Q15596 1464 aa16.82■□□□□ 0.28
CACNA1F-202ENST00000376251 RALBP1Q15311 655 aa16.82■□□□□ 0.28
CACNA1F-202ENST00000376251 RAPGEF3O95398 923 aa16.8■□□□□ 0.28
CACNA1F-202ENST00000376251 COG3Q96JB2 828 aa16.8■□□□□ 0.28
CACNA1F-202ENST00000376251 LRRC9Q6ZRR7 1453 aa16.8■□□□□ 0.28
CACNA1F-202ENST00000376251 EFCAB5A4FU69 1503 aa16.79■□□□□ 0.28
CACNA1F-202ENST00000376251 KIAA0586Q9BVV6 1533 aa16.79■□□□□ 0.28
CACNA1F-202ENST00000376251 ST20-MTHFSA0A0A6YYL1 179 aa16.79■□□□□ 0.28
CACNA1F-202ENST00000376251 TMX4Q9H1E5 349 aaPredicted RBP16.79■□□□□ 0.28
CACNA1F-202ENST00000376251 SUPT16HQ9Y5B9 1047 aaKnown RBP16.79■□□□□ 0.28
CACNA1F-202ENST00000376251 ANKRD50Q9ULJ7 1429 aa16.78■□□□□ 0.28
CACNA1F-202ENST00000376251 SCAPERQ9BY12 1400 aa16.77■□□□□ 0.28
CACNA1F-202ENST00000376251 ABCA10Q8WWZ4 1543 aa16.77■□□□□ 0.28
CACNA1F-202ENST00000376251 UNC13AQ9UPW8 1703 aa16.77■□□□□ 0.28
CACNA1F-202ENST00000376251 TXNDC2Q86VQ3 553 aa16.77■□□□□ 0.27
CACNA1F-202ENST00000376251 ANP32BQ92688 251 aaKnown RBP16.76■□□□□ 0.27
CACNA1F-202ENST00000376251 PHLDB1Q86UU1 1377 aa16.75■□□□□ 0.27
CACNA1F-202ENST00000376251 POGZQ7Z3K3 1410 aa16.75■□□□□ 0.27
CACNA1F-202ENST00000376251 CHMP4AQ9BY43 222 aa16.75■□□□□ 0.27
CACNA1F-202ENST00000376251 PLEKHH2Q8IVE3 1493 aa16.74■□□□□ 0.27
CACNA1F-202ENST00000376251 MAGI1Q96QZ7 1491 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms