RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 HDGFP51858 240 aaKnown RBP17.69■□□□□ 0.42
C9orf47-203ENST00000375851 CCDC18Q5T9S5 1454 aa17.69■□□□□ 0.42
C9orf47-203ENST00000375851 KIF3BO15066 747 aa17.68■□□□□ 0.42
C9orf47-203ENST00000375851 ROCK2O75116 1388 aaKnown RBP17.68■□□□□ 0.42
C9orf47-203ENST00000375851 RSPH4AQ5TD94 716 aa17.68■□□□□ 0.42
C9orf47-203ENST00000375851 STK26Q9P289 416 aa17.68■□□□□ 0.42
C9orf47-203ENST00000375851 KTN1Q86UP2 1357 aaKnown RBP17.66■□□□□ 0.42
C9orf47-203ENST00000375851 PNNQ9H307 717 aaKnown RBP17.65■□□□□ 0.42
C9orf47-203ENST00000375851 IGF1RP08069 1367 aa17.64■□□□□ 0.42
C9orf47-203ENST00000375851 DHX57Q6P158 1386 aaKnown RBP17.64■□□□□ 0.42
C9orf47-203ENST00000375851 TRHP20396 242 aaPredicted RBP17.64■□□□□ 0.42
C9orf47-203ENST00000375851 EIF5BO60841 1220 aaKnown RBP17.63■□□□□ 0.41
C9orf47-203ENST00000375851 SPAG9O60271 1321 aaKnown RBP17.63■□□□□ 0.41
C9orf47-203ENST00000375851 MS4A1P11836 297 aa17.62■□□□□ 0.41
C9orf47-203ENST00000375851 SOX12O15370 315 aa17.62■□□□□ 0.41
C9orf47-203ENST00000375851 RALBP1Q15311 655 aa17.61■□□□□ 0.41
C9orf47-203ENST00000375851 CHMP4BQ9H444 224 aaKnown RBP17.59■□□□□ 0.41
C9orf47-203ENST00000375851 FGD5Q6ZNL6 1462 aa17.58■□□□□ 0.41
C9orf47-203ENST00000375851 HDGFL2Q7Z4V5 671 aaPredicted RBP17.56■□□□□ 0.4
C9orf47-203ENST00000375851 CASC1Q6TDU7 716 aa17.55■□□□□ 0.4
C9orf47-203ENST00000375851 GOLGA6L22H0YM25 854 aa17.54■□□□□ 0.4
C9orf47-203ENST00000375851 NCAPD3P42695 1498 aa17.54■□□□□ 0.4
C9orf47-203ENST00000375851 PTPRGP23470 1445 aa17.54■□□□□ 0.4
C9orf47-203ENST00000375851 RAD54L2Q9Y4B4 1467 aa17.54■□□□□ 0.4
C9orf47-203ENST00000375851 U2AF1L5P0DN76 240 aaPredicted RBP17.54■□□□□ 0.4
C9orf47-203ENST00000375851 U2AF1Q01081 240 aaKnown RBP eCLIP17.54■□□□□ 0.4
C9orf47-203ENST00000375851 GAPVD1Q14C86 1478 aa17.53■□□□□ 0.4
C9orf47-203ENST00000375851 ANP32EQ9BTT0 268 aa17.52■□□□□ 0.4
C9orf47-203ENST00000375851 WASHC2CQ9Y4E1 1318 aa17.52■□□□□ 0.4
C9orf47-203ENST00000375851 RCAN3Q9UKA8 241 aa17.52■□□□□ 0.4
C9orf47-203ENST00000375851 NCLP19338 710 aaKnown RBP17.51■□□□□ 0.39
C9orf47-203ENST00000375851 ST20-MTHFSA0A0A6YYL1 179 aa17.5■□□□□ 0.39
C9orf47-203ENST00000375851 NLRP13Q86W25 1043 aa17.5■□□□□ 0.39
C9orf47-203ENST00000375851 EIF3AQ14152 1382 aaKnown RBP17.49■□□□□ 0.39
C9orf47-203ENST00000375851 ERICH6BQ5W0A0 696 aa17.48■□□□□ 0.39
C9orf47-203ENST00000375851 NUTM2DQ5VT03 806 aaPredicted RBP17.47■□□□□ 0.39
C9orf47-203ENST00000375851 NOP58Q9Y2X3 529 aaKnown RBP17.47■□□□□ 0.39
C9orf47-203ENST00000375851 CCDC144AA2RUR9 1427 aa17.46■□□□□ 0.39
C9orf47-203ENST00000375851 OS9Q13438 667 aaPredicted RBP17.45■□□□□ 0.38
C9orf47-203ENST00000375851 RTF1Q92541 710 aaKnown RBP17.44■□□□□ 0.38
C9orf47-203ENST00000375851 TRAK1Q9UPV9 953 aa17.43■□□□□ 0.38
C9orf47-203ENST00000375851 TERF2IPQ9NYB0 399 aa17.43■□□□□ 0.38
C9orf47-203ENST00000375851 RBM19Q9Y4C8 960 aaKnown RBP17.43■□□□□ 0.38
C9orf47-203ENST00000375851 IPO8O15397 1037 aaKnown RBP17.42■□□□□ 0.38
C9orf47-203ENST00000375851 KIF21BO75037 1637 aa17.41■□□□□ 0.38
C9orf47-203ENST00000375851 ZNF644Q9H582 1327 aaPredicted RBP17.41■□□□□ 0.38
C9orf47-203ENST00000375851 PAK3O75914 559 aaPredicted RBP17.4■□□□□ 0.38
C9orf47-203ENST00000375851 GOLGA2Q08379 1002 aa17.4■□□□□ 0.38
C9orf47-203ENST00000375851 TRIM44Q96DX7 344 aaPredicted RBP17.4■□□□□ 0.38
C9orf47-203ENST00000375851 PHLDB1Q86UU1 1377 aa17.39■□□□□ 0.38
C9orf47-203ENST00000375851 FGD6Q6ZV73 1430 aa17.39■□□□□ 0.38
C9orf47-203ENST00000375851 PRKRIP1Q9H875 184 aaPredicted RBP17.39■□□□□ 0.37
C9orf47-203ENST00000375851 PANK3Q9H999 370 aa17.39■□□□□ 0.37
C9orf47-203ENST00000375851 AQRO60306 1485 aaKnown RBP eCLIP17.38■□□□□ 0.37
C9orf47-203ENST00000375851 CALD1Q05682 793 aaKnown RBP17.38■□□□□ 0.37
C9orf47-203ENST00000375851 MYOM3Q5VTT5 1437 aa17.38■□□□□ 0.37
C9orf47-203ENST00000375851 CCDC146Q8IYE0 955 aa17.38■□□□□ 0.37
C9orf47-203ENST00000375851 KIF15Q9NS87 1388 aa17.37■□□□□ 0.37
C9orf47-203ENST00000375851 HSP90AB1P08238 724 aaKnown RBP17.37■□□□□ 0.37
C9orf47-203ENST00000375851 PDE3BQ13370 1112 aa17.37■□□□□ 0.37
C9orf47-203ENST00000375851 TPRNQ4KMQ1 711 aa17.36■□□□□ 0.37
C9orf47-203ENST00000375851 USP47Q96K76 1375 aa17.36■□□□□ 0.37
C9orf47-203ENST00000375851 MYBBP1AQ9BQG0 1328 aaKnown RBP17.35■□□□□ 0.37
C9orf47-203ENST00000375851 KCNJ4P48050 445 aa17.35■□□□□ 0.37
C9orf47-203ENST00000375851 LRRC9Q6ZRR7 1453 aa17.34■□□□□ 0.37
C9orf47-203ENST00000375851 ITPRIPQ8IWB1 547 aa17.33■□□□□ 0.37
C9orf47-203ENST00000375851 EID1Q9Y6B2 187 aa17.33■□□□□ 0.37
C9orf47-203ENST00000375851 CFTRP13569 1480 aa17.33■□□□□ 0.37
C9orf47-203ENST00000375851 CYB5RLQ6IPT4 315 aa17.33■□□□□ 0.37
C9orf47-203ENST00000375851 RWDD1Q9H446 243 aaPredicted RBP17.33■□□□□ 0.36
C9orf47-203ENST00000375851 APBB1O00213 710 aa17.32■□□□□ 0.36
C9orf47-203ENST00000375851 OSCARQ8IYS5 282 aa17.32■□□□□ 0.36
C9orf47-203ENST00000375851 TCERG1O14776 1098 aaKnown RBP17.32■□□□□ 0.36
C9orf47-203ENST00000375851 VGFO15240 615 aaPredicted RBP17.31■□□□□ 0.36
C9orf47-203ENST00000375851 FGD1P98174 961 aa17.31■□□□□ 0.36
C9orf47-203ENST00000375851 HSCBQ8IWL3 235 aa17.31■□□□□ 0.36
C9orf47-203ENST00000375851 SMC4Q9NTJ3 1288 aa17.31■□□□□ 0.36
C9orf47-203ENST00000375851 NUTM2FA1L443 756 aa17.3■□□□□ 0.36
C9orf47-203ENST00000375851 CLUAP1Q96AJ1 413 aa17.3■□□□□ 0.36
C9orf47-203ENST00000375851 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.3■□□□□ 0.36
C9orf47-203ENST00000375851 ARAP1Q96P48 1450 aa17.3■□□□□ 0.36
C9orf47-203ENST00000375851 NGDNQ8NEJ9 315 aaKnown RBP17.3■□□□□ 0.36
C9orf47-203ENST00000375851 CASKIN1Q8WXD9 1431 aa17.3■□□□□ 0.36
C9orf47-203ENST00000375851 UACAQ9BZF9 1416 aa17.3■□□□□ 0.36
C9orf47-203ENST00000375851 ZRSR1Q15695 479 aaKnown RBP17.29■□□□□ 0.36
C9orf47-203ENST00000375851 SYNJ1O43426 1573 aa17.29■□□□□ 0.36
C9orf47-203ENST00000375851 NPHP1O15259 732 aa17.28■□□□□ 0.36
C9orf47-203ENST00000375851 PTMAP06454 111 aaKnown RBP17.27■□□□□ 0.36
C9orf47-203ENST00000375851 CENPJQ9HC77 1338 aaPredicted RBP17.27■□□□□ 0.36
C9orf47-203ENST00000375851 CSB-PGBD3P0DP91 1061 aa17.26■□□□□ 0.35
C9orf47-203ENST00000375851 CUX1P39880 1505 aa17.26■□□□□ 0.35
C9orf47-203ENST00000375851 NCOA2Q15596 1464 aa17.26■□□□□ 0.35
C9orf47-203ENST00000375851 RRP7AQ9Y3A4 280 aaKnown RBP17.26■□□□□ 0.35
C9orf47-203ENST00000375851 ERICH3Q5RHP9 1530 aa17.25■□□□□ 0.35
C9orf47-203ENST00000375851 SPRYD3Q8NCJ5 442 aa17.25■□□□□ 0.35
C9orf47-203ENST00000375851 CFAP44Q96MT7 982 aa17.25■□□□□ 0.35
C9orf47-203ENST00000375851 TSHZ2Q9NRE2 1034 aa17.25■□□□□ 0.35
C9orf47-203ENST00000375851 PMFBP1Q8TBY8 1022 aa17.24■□□□□ 0.35
C9orf47-203ENST00000375851 STK31Q9BXU1 1019 aa17.24■□□□□ 0.35
C9orf47-203ENST00000375851 GRIN2BQ13224 1484 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms