RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 TPM4P67936 248 aa12.41□□□□□ -0.42
SPEN-201ENST00000375759 FHAD1B1AJZ9 1412 aa12.41□□□□□ -0.42
SPEN-201ENST00000375759 CCNB3Q8WWL7 1395 aa12.41□□□□□ -0.42
SPEN-201ENST00000375759 NPHP1O15259 732 aa12.4□□□□□ -0.42
SPEN-201ENST00000375759 SENP3Q9H4L4 574 aaPredicted RBP12.4□□□□□ -0.42
SPEN-201ENST00000375759 GZF1Q9H116 711 aaPredicted RBP12.39□□□□□ -0.43
SPEN-201ENST00000375759 KTN1Q86UP2 1357 aaKnown RBP12.39□□□□□ -0.43
SPEN-201ENST00000375759 PHF14O94880 888 aa12.39□□□□□ -0.43
SPEN-201ENST00000375759 KCNH8Q96L42 1107 aa12.39□□□□□ -0.43
SPEN-201ENST00000375759 CSPP1Q1MSJ5 1256 aa12.39□□□□□ -0.43
SPEN-201ENST00000375759 IPO9Q96P70 1041 aaKnown RBP12.39□□□□□ -0.43
SPEN-201ENST00000375759 RWDD1Q9H446 243 aaPredicted RBP12.38□□□□□ -0.43
SPEN-201ENST00000375759 SIN3AQ96ST3 1273 aa12.38□□□□□ -0.43
SPEN-201ENST00000375759 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.38□□□□□ -0.43
SPEN-201ENST00000375759 CCDC34Q96HJ3 373 aa12.38□□□□□ -0.43
SPEN-201ENST00000375759 WRNQ14191 1432 aaPredicted RBP eCLIP12.38□□□□□ -0.43
SPEN-201ENST00000375759 RCAN3Q9UKA8 241 aa12.37□□□□□ -0.43
SPEN-201ENST00000375759 CALD1Q05682 793 aaKnown RBP12.37□□□□□ -0.43
SPEN-201ENST00000375759 RSPH6AQ9H0K4 717 aa12.37□□□□□ -0.43
SPEN-201ENST00000375759 SLKQ9H2G2 1235 aaPredicted RBP12.36□□□□□ -0.43
SPEN-201ENST00000375759 CLSTN1O94985 981 aa12.36□□□□□ -0.43
SPEN-201ENST00000375759 PMFBP1Q8TBY8 1022 aa12.35□□□□□ -0.43
SPEN-201ENST00000375759 HSP90AA2PQ14568 343 aaPredicted RBP12.35□□□□□ -0.43
SPEN-201ENST00000375759 ARID3AQ99856 593 aa12.35□□□□□ -0.43
SPEN-201ENST00000375759 KANK1Q14678 1352 aa12.35□□□□□ -0.43
SPEN-201ENST00000375759 MORC1Q86VD1 984 aa12.34□□□□□ -0.43
SPEN-201ENST00000375759 RB1CC1Q8TDY2 1594 aa12.34□□□□□ -0.43
SPEN-201ENST00000375759 DCAF11Q8TEB1 546 aa12.33□□□□□ -0.44
SPEN-201ENST00000375759 RTF1Q92541 710 aaKnown RBP12.33□□□□□ -0.44
SPEN-201ENST00000375759 RALBP1Q15311 655 aa12.33□□□□□ -0.44
SPEN-201ENST00000375759 SETD5Q9C0A6 1442 aa12.32□□□□□ -0.44
SPEN-201ENST00000375759 GPATCH3Q96I76 525 aa12.31□□□□□ -0.44
SPEN-201ENST00000375759 DDX11L8A8MPP1 907 aa12.31□□□□□ -0.44
SPEN-201ENST00000375759 CHMP4AQ9BY43 222 aa12.3□□□□□ -0.44
SPEN-201ENST00000375759 SETQ01105 290 aaPredicted RBP12.3□□□□□ -0.44
SPEN-201ENST00000375759 A0A0U1RQG5 324 aaPredicted RBP12.3□□□□□ -0.44
SPEN-201ENST00000375759 ITPRIPQ8IWB1 547 aa12.3□□□□□ -0.44
SPEN-201ENST00000375759 ARHGAP35Q9NRY4 1499 aa12.3□□□□□ -0.44
SPEN-201ENST00000375759 LMOD2Q6P5Q4 547 aa12.29□□□□□ -0.44
SPEN-201ENST00000375759 BAZ1BQ9UIG0 1483 aaKnown RBP12.28□□□□□ -0.44
SPEN-201ENST00000375759 SRPK2P78362 688 aaKnown RBP12.28□□□□□ -0.44
SPEN-201ENST00000375759 TSHZ2Q9NRE2 1034 aa12.28□□□□□ -0.44
SPEN-201ENST00000375759 ST18O60284 1047 aa12.27□□□□□ -0.45
SPEN-201ENST00000375759 MFAP1P55081 439 aaKnown RBP12.26□□□□□ -0.45
SPEN-201ENST00000375759 HDGFP51858 240 aaKnown RBP12.26□□□□□ -0.45
SPEN-201ENST00000375759 APBB1O00213 710 aa12.26□□□□□ -0.45
SPEN-201ENST00000375759 HDAC5Q9UQL6 1122 aa12.26□□□□□ -0.45
SPEN-201ENST00000375759 HSPA5P11021 654 aaKnown RBP12.26□□□□□ -0.45
SPEN-201ENST00000375759 PHLDB1Q86UU1 1377 aa12.26□□□□□ -0.45
SPEN-201ENST00000375759 HMMRO75330 724 aa12.26□□□□□ -0.45
SPEN-201ENST00000375759 TPM3P06753 285 aa12.25□□□□□ -0.45
SPEN-201ENST00000375759 ROCK2O75116 1388 aaKnown RBP12.25□□□□□ -0.45
SPEN-201ENST00000375759 ISY1Q9ULR0 285 aaKnown RBP12.25□□□□□ -0.45
SPEN-201ENST00000375759 EIF3AQ14152 1382 aaKnown RBP12.24□□□□□ -0.45
SPEN-201ENST00000375759 KIF3AQ9Y496 699 aa12.24□□□□□ -0.45
SPEN-201ENST00000375759 SKOR2Q2VWA4 1001 aaPredicted RBP12.24□□□□□ -0.45
SPEN-201ENST00000375759 PDE3BQ13370 1112 aa12.23□□□□□ -0.45
SPEN-201ENST00000375759 TRIM6-TRIM34B2RNG4 842 aa12.23□□□□□ -0.45
SPEN-201ENST00000375759 HSP90B1P14625 803 aaKnown RBP12.23□□□□□ -0.45
SPEN-201ENST00000375759 NCBP3Q53F19 620 aaKnown RBP12.23□□□□□ -0.45
SPEN-201ENST00000375759 HDGFL2Q7Z4V5 671 aaPredicted RBP12.23□□□□□ -0.45
SPEN-201ENST00000375759 GPS2Q13227 327 aa12.23□□□□□ -0.45
SPEN-201ENST00000375759 KIF16BQ96L93 1317 aa12.22□□□□□ -0.45
SPEN-201ENST00000375759 SPAG9O60271 1321 aaKnown RBP12.22□□□□□ -0.45
SPEN-201ENST00000375759 U2AF1L5P0DN76 240 aaPredicted RBP12.21□□□□□ -0.45
SPEN-201ENST00000375759 U2AF1Q01081 240 aaKnown RBP eCLIP12.21□□□□□ -0.45
SPEN-201ENST00000375759 GSE1Q14687 1217 aa12.21□□□□□ -0.45
SPEN-201ENST00000375759 ATP6V1DQ9Y5K8 247 aa12.21□□□□□ -0.46
SPEN-201ENST00000375759 SMC4Q9NTJ3 1288 aa12.21□□□□□ -0.46
SPEN-201ENST00000375759 STK31Q9BXU1 1019 aa12.2□□□□□ -0.46
SPEN-201ENST00000375759 EIF4G1Q04637 1599 aaKnown RBP12.2□□□□□ -0.46
SPEN-201ENST00000375759 VPS8Q8N3P4 1428 aa12.2□□□□□ -0.46
SPEN-201ENST00000375759 CCDC70Q6NSX1 233 aa12.19□□□□□ -0.46
SPEN-201ENST00000375759 CHMP4CQ96CF2 233 aa12.19□□□□□ -0.46
SPEN-201ENST00000375759 NACADO15069 1562 aa12.18□□□□□ -0.46
SPEN-201ENST00000375759 TSR1Q2NL82 804 aaKnown RBP12.18□□□□□ -0.46
SPEN-201ENST00000375759 GOLGA6L19H0YKK7 550 aa12.18□□□□□ -0.46
SPEN-201ENST00000375759 CEP89Q96ST8 783 aa12.18□□□□□ -0.46
SPEN-201ENST00000375759 CENPJQ9HC77 1338 aaPredicted RBP12.18□□□□□ -0.46
SPEN-201ENST00000375759 RASSF8Q8NHQ8 419 aa12.18□□□□□ -0.46
SPEN-201ENST00000375759 CENPQQ7L2Z9 268 aaPredicted RBP12.18□□□□□ -0.46
SPEN-201ENST00000375759 GORABQ5T7V8 394 aa12.17□□□□□ -0.46
SPEN-201ENST00000375759 BAZ1AQ9NRL2 1556 aaPredicted RBP12.17□□□□□ -0.46
SPEN-201ENST00000375759 SOX12O15370 315 aa12.16□□□□□ -0.46
SPEN-201ENST00000375759 SF3A1Q15459 793 aaKnown RBP12.16□□□□□ -0.46
SPEN-201ENST00000375759 TPM1P09493 284 aa12.16□□□□□ -0.46
SPEN-201ENST00000375759 FAM161AQ3B820 660 aa12.16□□□□□ -0.46
SPEN-201ENST00000375759 NLRP13Q86W25 1043 aa12.16□□□□□ -0.46
SPEN-201ENST00000375759 TEX35Q5T0J7 233 aa12.15□□□□□ -0.46
SPEN-201ENST00000375759 VSIG10Q8N0Z9 540 aa12.15□□□□□ -0.46
SPEN-201ENST00000375759 ZNF771Q7L3S4 317 aaPredicted RBP12.15□□□□□ -0.46
SPEN-201ENST00000375759 LMOD3Q0VAK6 560 aa12.15□□□□□ -0.46
SPEN-201ENST00000375759 DDX49Q9Y6V7 483 aaKnown RBP12.15□□□□□ -0.46
SPEN-201ENST00000375759 RAB3GAP2Q9H2M9 1393 aa12.14□□□□□ -0.47
SPEN-201ENST00000375759 CREBRFQ8IUR6 639 aa12.14□□□□□ -0.47
SPEN-201ENST00000375759 H3BQV1 296 aa12.14□□□□□ -0.47
SPEN-201ENST00000375759 IFFO2Q5TF58 517 aa12.14□□□□□ -0.47
SPEN-201ENST00000375759 PKD2Q13563 968 aa12.13□□□□□ -0.47
SPEN-201ENST00000375759 TPD52L1Q16890 204 aaPredicted RBP12.13□□□□□ -0.47
SPEN-201ENST00000375759 BECN2A8MW95 431 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms