RNA–Protein interactions for RNA: ENST00000375003.6

HP1BP3-203, Transcript of heterochromatin protein 1 binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene HP1BP3, Length 4,822 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HP1BP3-203ENST00000375003 GTF3C3Q9Y5Q9 886 aa9.26□□□□□ -0.93
HP1BP3-203ENST00000375003 HNRNPUQ00839 825 aaKnown RBP eCLIP9.25□□□□□ -0.93
HP1BP3-203ENST00000375003 SYNJ1O43426 1573 aa9.25□□□□□ -0.93
HP1BP3-203ENST00000375003 TMF1P82094 1093 aa9.24□□□□□ -0.93
HP1BP3-203ENST00000375003 SYNJ2O15056 1496 aa9.24□□□□□ -0.93
HP1BP3-203ENST00000375003 UNC13AQ9UPW8 1703 aa9.23□□□□□ -0.93
HP1BP3-203ENST00000375003 NUTM2DQ5VT03 806 aaPredicted RBP9.22□□□□□ -0.93
HP1BP3-203ENST00000375003 TIMELESSQ9UNS1 1208 aa9.22□□□□□ -0.93
HP1BP3-203ENST00000375003 TOP2BQ02880 1626 aa9.22□□□□□ -0.93
HP1BP3-203ENST00000375003 PRDM2Q13029 1718 aa9.21□□□□□ -0.94
HP1BP3-203ENST00000375003 SOX12O15370 315 aa9.21□□□□□ -0.94
HP1BP3-203ENST00000375003 NUDCQ9Y266 331 aa9.21□□□□□ -0.94
HP1BP3-203ENST00000375003 RAB3GAP2Q9H2M9 1393 aa9.21□□□□□ -0.94
HP1BP3-203ENST00000375003 TNNT2P45379 298 aaPredicted RBP9.2□□□□□ -0.94
HP1BP3-203ENST00000375003 ABCA10Q8WWZ4 1543 aa9.2□□□□□ -0.94
HP1BP3-203ENST00000375003 AFAP1Q8N556 730 aa9.2□□□□□ -0.94
HP1BP3-203ENST00000375003 PEG3Q9GZU2 1588 aa9.19□□□□□ -0.94
HP1BP3-203ENST00000375003 PAK3O75914 559 aaPredicted RBP9.19□□□□□ -0.94
HP1BP3-203ENST00000375003 NCBP3Q53F19 620 aaKnown RBP9.19□□□□□ -0.94
HP1BP3-203ENST00000375003 KIAA0586Q9BVV6 1533 aa9.19□□□□□ -0.94
HP1BP3-203ENST00000375003 HDGFL2Q7Z4V5 671 aaPredicted RBP9.19□□□□□ -0.94
HP1BP3-203ENST00000375003 MYOM3Q5VTT5 1437 aa9.18□□□□□ -0.94
HP1BP3-203ENST00000375003 ZNF644Q9H582 1327 aaPredicted RBP9.18□□□□□ -0.94
HP1BP3-203ENST00000375003 URB2Q14146 1524 aaKnown RBP9.18□□□□□ -0.94
HP1BP3-203ENST00000375003 ARXQ96QS3 562 aa9.17□□□□□ -0.94
HP1BP3-203ENST00000375003 VGFO15240 615 aaPredicted RBP9.17□□□□□ -0.94
HP1BP3-203ENST00000375003 MAGI1Q96QZ7 1491 aaPredicted RBP9.17□□□□□ -0.94
HP1BP3-203ENST00000375003 CASKIN1Q8WXD9 1431 aa9.16□□□□□ -0.94
HP1BP3-203ENST00000375003 MAPK8IP3Q9UPT6 1336 aa9.16□□□□□ -0.94
HP1BP3-203ENST00000375003 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.16□□□□□ -0.94
HP1BP3-203ENST00000375003 ERICH3Q5RHP9 1530 aa9.16□□□□□ -0.94
HP1BP3-203ENST00000375003 PRXQ9BXM0 1461 aa9.15□□□□□ -0.94
HP1BP3-203ENST00000375003 UACAQ9BZF9 1416 aa9.15□□□□□ -0.94
HP1BP3-203ENST00000375003 ROCK2O75116 1388 aaKnown RBP9.15□□□□□ -0.94
HP1BP3-203ENST00000375003 PODXL2Q9NZ53 605 aa9.15□□□□□ -0.94
HP1BP3-203ENST00000375003 ZNF608Q9ULD9 1512 aaPredicted RBP9.15□□□□□ -0.95
HP1BP3-203ENST00000375003 U2SURPO15042 1029 aaKnown RBP9.15□□□□□ -0.95
HP1BP3-203ENST00000375003 CC2D1BQ5T0F9 858 aaKnown RBP9.15□□□□□ -0.95
HP1BP3-203ENST00000375003 NGDNQ8NEJ9 315 aaKnown RBP9.15□□□□□ -0.95
HP1BP3-203ENST00000375003 ARHGAP5Q13017 1502 aa9.14□□□□□ -0.95
HP1BP3-203ENST00000375003 CCDC144AA2RUR9 1427 aa9.14□□□□□ -0.95
HP1BP3-203ENST00000375003 KIF15Q9NS87 1388 aa9.14□□□□□ -0.95
HP1BP3-203ENST00000375003 MORC1Q86VD1 984 aa9.14□□□□□ -0.95
HP1BP3-203ENST00000375003 GRIN2AQ12879 1464 aa9.13□□□□□ -0.95
HP1BP3-203ENST00000375003 NUTM2FA1L443 756 aa9.13□□□□□ -0.95
HP1BP3-203ENST00000375003 RAPGEF3O95398 923 aa9.13□□□□□ -0.95
HP1BP3-203ENST00000375003 CSB-PGBD3P0DP91 1061 aa9.13□□□□□ -0.95
HP1BP3-203ENST00000375003 NEUROD2Q15784 382 aa9.13□□□□□ -0.95
HP1BP3-203ENST00000375003 L3MBTL2Q969R5 705 aa9.13□□□□□ -0.95
HP1BP3-203ENST00000375003 EIF3AQ14152 1382 aaKnown RBP9.12□□□□□ -0.95
HP1BP3-203ENST00000375003 TRAK1Q9UPV9 953 aa9.12□□□□□ -0.95
HP1BP3-203ENST00000375003 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.12□□□□□ -0.95
HP1BP3-203ENST00000375003 CCDC9Q9Y3X0 531 aaKnown RBP9.12□□□□□ -0.95
HP1BP3-203ENST00000375003 PNNQ9H307 717 aaKnown RBP9.11□□□□□ -0.95
HP1BP3-203ENST00000375003 EFCAB5A4FU69 1503 aa9.11□□□□□ -0.95
HP1BP3-203ENST00000375003 FGD6Q6ZV73 1430 aa9.11□□□□□ -0.95
HP1BP3-203ENST00000375003 TERF2IPQ9NYB0 399 aa9.11□□□□□ -0.95
HP1BP3-203ENST00000375003 KIF21BO75037 1637 aa9.11□□□□□ -0.95
HP1BP3-203ENST00000375003 HSPA5P11021 654 aaKnown RBP9.11□□□□□ -0.95
HP1BP3-203ENST00000375003 LAS1LQ9Y4W2 734 aaKnown RBP9.1□□□□□ -0.95
HP1BP3-203ENST00000375003 TROQ12816 1431 aaPredicted RBP9.1□□□□□ -0.95
HP1BP3-203ENST00000375003 NCOA2Q15596 1464 aa9.1□□□□□ -0.95
HP1BP3-203ENST00000375003 FYCO1Q9BQS8 1478 aa9.1□□□□□ -0.95
HP1BP3-203ENST00000375003 SCAPERQ9BY12 1400 aa9.09□□□□□ -0.95
HP1BP3-203ENST00000375003 NPHP1O15259 732 aa9.09□□□□□ -0.95
HP1BP3-203ENST00000375003 LRRC9Q6ZRR7 1453 aa9.09□□□□□ -0.95
HP1BP3-203ENST00000375003 ARAP1Q96P48 1450 aa9.08□□□□□ -0.96
HP1BP3-203ENST00000375003 IQGAP2Q13576 1575 aa9.08□□□□□ -0.96
HP1BP3-203ENST00000375003 GLIPR1L2Q4G1C9 344 aa9.08□□□□□ -0.96
HP1BP3-203ENST00000375003 MYH16Q9H6N6 1097 aa9.08□□□□□ -0.96
HP1BP3-203ENST00000375003 PLEKHH2Q8IVE3 1493 aa9.08□□□□□ -0.96
HP1BP3-203ENST00000375003 MIER1Q8N108 512 aa9.07□□□□□ -0.96
HP1BP3-203ENST00000375003 POGZQ7Z3K3 1410 aa9.07□□□□□ -0.96
HP1BP3-203ENST00000375003 ANKRD50Q9ULJ7 1429 aa9.07□□□□□ -0.96
HP1BP3-203ENST00000375003 PHLDB1Q86UU1 1377 aa9.07□□□□□ -0.96
HP1BP3-203ENST00000375003 CD109Q6YHK3 1445 aa9.07□□□□□ -0.96
HP1BP3-203ENST00000375003 SENP3-EIF4A1A0A087X0R7 540 aa9.06□□□□□ -0.96
HP1BP3-203ENST00000375003 THEMISQ8N1K5 641 aaPredicted RBP9.05□□□□□ -0.96
HP1BP3-203ENST00000375003 TXNDC2Q86VQ3 553 aa9.05□□□□□ -0.96
HP1BP3-203ENST00000375003 ATF3P18847 181 aa9.04□□□□□ -0.96
HP1BP3-203ENST00000375003 RTF1Q92541 710 aaKnown RBP9.04□□□□□ -0.96
HP1BP3-203ENST00000375003 CUL7Q14999 1698 aa9.04□□□□□ -0.96
HP1BP3-203ENST00000375003 MINK1Q8N4C8 1332 aaPredicted RBP9.04□□□□□ -0.96
HP1BP3-203ENST00000375003 AMPHP49418 695 aa9.03□□□□□ -0.96
HP1BP3-203ENST00000375003 PLB1Q6P1J6 1458 aa9.03□□□□□ -0.96
HP1BP3-203ENST00000375003 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.03□□□□□ -0.96
HP1BP3-203ENST00000375003 STAC3Q96MF2 364 aa9.03□□□□□ -0.96
HP1BP3-203ENST00000375003 HECW1Q76N89 1606 aa9.03□□□□□ -0.96
HP1BP3-203ENST00000375003 EVC2Q86UK5 1308 aa9.02□□□□□ -0.96
HP1BP3-203ENST00000375003 FKBP8Q14318 412 aa9.02□□□□□ -0.96
HP1BP3-203ENST00000375003 KTN1Q86UP2 1357 aaKnown RBP9.02□□□□□ -0.97
HP1BP3-203ENST00000375003 U2AF1L5P0DN76 240 aaPredicted RBP9.01□□□□□ -0.97
HP1BP3-203ENST00000375003 U2AF1Q01081 240 aaKnown RBP eCLIP9.01□□□□□ -0.974e-10■■□□□ 14.4
HP1BP3-203ENST00000375003 CCDC136Q96JN2 1154 aa9.01□□□□□ -0.97
HP1BP3-203ENST00000375003 MIA2Q96PC5 1412 aa9.01□□□□□ -0.97
HP1BP3-203ENST00000375003 ST20-MTHFSA0A0A6YYL1 179 aa9.01□□□□□ -0.97
HP1BP3-203ENST00000375003 PSME1Q06323 249 aa9.01□□□□□ -0.97
HP1BP3-203ENST00000375003 PROSER2Q86WR7 435 aaPredicted RBP9.01□□□□□ -0.97
HP1BP3-203ENST00000375003 EPRSP07814 1512 aaKnown RBP9.01□□□□□ -0.97
HP1BP3-203ENST00000375003 C9orf84Q5VXU9 1444 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms